RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-223ENST00000476135 KNSTRNQ9Y448 316 aa9.57□□□□□ -0.88
HDAC9-223ENST00000476135 PTCH2Q9Y6C5 1203 aa9.57□□□□□ -0.88
HDAC9-223ENST00000476135 UNC80Q8N2C7 3258 aa9.57□□□□□ -0.88
HDAC9-223ENST00000476135 ZBTB7BO15156 539 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-223ENST00000476135 HCLS1P14317 486 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-223ENST00000476135 GPSM2P81274 684 aa9.56□□□□□ -0.88
HDAC9-223ENST00000476135 TTC13Q8NBP0 860 aa9.56□□□□□ -0.88
HDAC9-223ENST00000476135 SLC10A4Q96EP9 437 aa9.56□□□□□ -0.88
HDAC9-223ENST00000476135 ZC3H12CQ9C0D7 883 aaKnown RBP9.56□□□□□ -0.88
HDAC9-223ENST00000476135 SCAF8Q9UPN6 1271 aaKnown RBP9.56□□□□□ -0.88
HDAC9-223ENST00000476135 U2SURPO15042 1029 aaKnown RBP9.55□□□□□ -0.88
HDAC9-223ENST00000476135 MYL6BP14649 208 aa9.55□□□□□ -0.88
HDAC9-223ENST00000476135 MLLT3P42568 568 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-223ENST00000476135 NBPF9Q3BBW0 867 aa9.55□□□□□ -0.88
HDAC9-223ENST00000476135 PADI6Q6TGC4 694 aa9.55□□□□□ -0.88
HDAC9-223ENST00000476135 UBE2Q1Q7Z7E8 422 aa9.55□□□□□ -0.88
HDAC9-223ENST00000476135 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.55□□□□□ -0.88
HDAC9-223ENST00000476135 DEFB123Q8N688 67 aa9.55□□□□□ -0.88
HDAC9-223ENST00000476135 TBC1D16Q8TBP0 767 aa9.55□□□□□ -0.88
HDAC9-223ENST00000476135 RTF1Q92541 710 aaKnown RBP9.55□□□□□ -0.88
HDAC9-223ENST00000476135 SHISA4Q96DD7 197 aa9.55□□□□□ -0.88
HDAC9-223ENST00000476135 WNK4Q96J92 1243 aa9.55□□□□□ -0.88
HDAC9-223ENST00000476135 PHACTR3Q96KR7 559 aa9.55□□□□□ -0.88
HDAC9-223ENST00000476135 UNCXA6NJT0 531 aa9.54□□□□□ -0.88
HDAC9-223ENST00000476135 PRKG1Q13976 671 aa9.54□□□□□ -0.88
HDAC9-223ENST00000476135 TAF7Q15545 349 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-223ENST00000476135 MAP3K11Q16584 847 aa9.54□□□□□ -0.88
HDAC9-223ENST00000476135 MCM10Q7L590 875 aa9.54□□□□□ -0.88
HDAC9-223ENST00000476135 NKX2-3Q8TAU0 364 aa9.54□□□□□ -0.88
HDAC9-223ENST00000476135 ANGEL1Q9UNK9 670 aaKnown RBP9.54□□□□□ -0.88
HDAC9-223ENST00000476135 ERBB4Q15303 1308 aa9.54□□□□□ -0.88
HDAC9-223ENST00000476135 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-223ENST00000476135 TESPA1A2RU30 521 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-223ENST00000476135 HTATSF1O43719 755 aaKnown RBP9.53□□□□□ -0.88
HDAC9-223ENST00000476135 MYCP01106 439 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-223ENST00000476135 NLRP10Q86W26 655 aa9.53□□□□□ -0.88
HDAC9-223ENST00000476135 SH3TC2Q8TF17 1288 aa9.53□□□□□ -0.88
HDAC9-223ENST00000476135 CELF1Q92879 486 aaKnown RBP9.53□□□□□ -0.88
HDAC9-223ENST00000476135 MTMR10Q9NXD2 777 aa9.53□□□□□ -0.88
HDAC9-223ENST00000476135 PODXL2Q9NZ53 605 aa9.53□□□□□ -0.88
HDAC9-223ENST00000476135 SH3TC1Q8TE82 1336 aa9.53□□□□□ -0.88
HDAC9-223ENST00000476135 LAMA3Q16787 3333 aa9.53□□□□□ -0.88
HDAC9-223ENST00000476135 USP17L3A6NCW0 530 aa9.52□□□□□ -0.89
HDAC9-223ENST00000476135 USP17L4A6NCW7 530 aa9.52□□□□□ -0.89
HDAC9-223ENST00000476135 WNT10BO00744 389 aa9.52□□□□□ -0.89
HDAC9-223ENST00000476135 MMP14P50281 582 aa9.52□□□□□ -0.89
HDAC9-223ENST00000476135 PRMT2P55345 433 aa9.52□□□□□ -0.89
HDAC9-223ENST00000476135 SF3B3Q15393 1217 aaKnown RBP9.52□□□□□ -0.89
HDAC9-223ENST00000476135 HSP90AB3PQ58FF7 597 aa9.52□□□□□ -0.89
HDAC9-223ENST00000476135 USP17L1Q7RTZ2 530 aa9.52□□□□□ -0.89
HDAC9-223ENST00000476135 APOBEC3FQ8IUX4 373 aaKnown RBP9.52□□□□□ -0.89
HDAC9-223ENST00000476135 PTPN18Q99952 460 aa9.52□□□□□ -0.89
HDAC9-223ENST00000476135 IRX2Q9BZI1 471 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-223ENST00000476135 TRMT112Q9UI30 125 aaKnown RBP9.52□□□□□ -0.89
HDAC9-223ENST00000476135 COL1A1P02452 1464 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-223ENST00000476135 GNRH1P01148 92 aa9.51□□□□□ -0.89
HDAC9-223ENST00000476135 PRKAR2BP31323 418 aa9.51□□□□□ -0.89
HDAC9-223ENST00000476135 BMP8BP34820 402 aa9.51□□□□□ -0.89
HDAC9-223ENST00000476135 GJA8P48165 433 aa9.51□□□□□ -0.89
HDAC9-223ENST00000476135 TJAP1Q5JTD0 557 aa9.51□□□□□ -0.89
HDAC9-223ENST00000476135 PNISRQ8TF01 805 aaKnown RBP9.51□□□□□ -0.89
HDAC9-223ENST00000476135 CLMNQ96JQ2 1002 aa9.51□□□□□ -0.89
HDAC9-223ENST00000476135 STAP2Q9UGK3 403 aa9.51□□□□□ -0.89
HDAC9-223ENST00000476135 PPP1R12BO60237 982 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-223ENST00000476135 RNF40O75150 1001 aa9.5□□□□□ -0.89
HDAC9-223ENST00000476135 GJB1P08034 283 aa9.5□□□□□ -0.89
HDAC9-223ENST00000476135 DCTN1Q14203 1278 aa9.5□□□□□ -0.89
HDAC9-223ENST00000476135 MTFR1Q15390 333 aa9.5□□□□□ -0.89
HDAC9-223ENST00000476135 Q7L0L9 218 aa9.5□□□□□ -0.89
HDAC9-223ENST00000476135 LRP10Q7Z4F1 713 aa9.5□□□□□ -0.89
HDAC9-223ENST00000476135 PODNQ7Z5L7 613 aa9.5□□□□□ -0.89
HDAC9-223ENST00000476135 OGFOD1Q8N543 542 aa9.5□□□□□ -0.89
HDAC9-223ENST00000476135 RSPH6AQ9H0K4 717 aa9.5□□□□□ -0.89
HDAC9-223ENST00000476135 ZFYVE28Q9HCC9 887 aa9.5□□□□□ -0.89
HDAC9-223ENST00000476135 MIS18AQ9NYP9 233 aa9.5□□□□□ -0.89
HDAC9-223ENST00000476135 GGA1Q9UJY5 639 aa9.5□□□□□ -0.89
HDAC9-223ENST00000476135 COL4A1P02462 1669 aa9.49□□□□□ -0.89
HDAC9-223ENST00000476135 UFL1O94874 794 aa9.49□□□□□ -0.89
HDAC9-223ENST00000476135 GJA5P36382 358 aa9.49□□□□□ -0.89
HDAC9-223ENST00000476135 EIF4A1P60842 406 aaKnown RBP9.49□□□□□ -0.89
HDAC9-223ENST00000476135 RPS8P62241 208 aaKnown RBP9.49□□□□□ -0.89
HDAC9-223ENST00000476135 TRIM26Q12899 539 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-223ENST00000476135 KIF22Q14807 665 aa9.49□□□□□ -0.89
HDAC9-223ENST00000476135 LRIT3Q3SXY7 679 aa9.49□□□□□ -0.89
HDAC9-223ENST00000476135 GDF15Q99988 308 aa9.49□□□□□ -0.89
HDAC9-223ENST00000476135 FZD1Q9UP38 647 aa9.49□□□□□ -0.89
HDAC9-223ENST00000476135 MYO3BQ8WXR4 1341 aa9.49□□□□□ -0.89
HDAC9-223ENST00000476135 CAPN2P17655 700 aa9.48□□□□□ -0.89
HDAC9-223ENST00000476135 TAF1CQ15572 869 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-223ENST00000476135 SWT1Q5T5J6 900 aaKnown RBP9.48□□□□□ -0.89
HDAC9-223ENST00000476135 PPP2R3BQ9Y5P8 575 aa9.48□□□□□ -0.89
HDAC9-223ENST00000476135 ZSWIM8A7E2V4 1837 aa9.47□□□□□ -0.89
HDAC9-223ENST00000476135 SSC5DA1L4H1 1573 aa9.47□□□□□ -0.89
HDAC9-223ENST00000476135 SASH1O94885 1247 aa9.47□□□□□ -0.89
HDAC9-223ENST00000476135 FARP2O94887 1054 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-223ENST00000476135 IREB2P48200 963 aaKnown RBP9.47□□□□□ -0.89
HDAC9-223ENST00000476135 LACTBP83111 547 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-223ENST00000476135 DACT2Q5SW24 774 aa9.47□□□□□ -0.89
HDAC9-223ENST00000476135 ZBED3Q96IU2 234 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-223ENST00000476135 MTRQ99707 1265 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms