RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 TPTE2Q6XPS3 522 aa11.7□□□□□ -0.54
ITGA6-210ENST00000475302 NUDT18Q6ZVK8 323 aa11.7□□□□□ -0.54
ITGA6-210ENST00000475302 FAM227BQ96M60 508 aa11.7□□□□□ -0.54
ITGA6-210ENST00000475302 ANTXR1Q9H6X2 564 aa11.7□□□□□ -0.54
ITGA6-210ENST00000475302 CNNM1Q9NRU3 951 aa11.7□□□□□ -0.54
ITGA6-210ENST00000475302 AKAP11Q9UKA4 1901 aa11.7□□□□□ -0.54
ITGA6-210ENST00000475302 CARMIL3Q8ND23 1372 aa11.69□□□□□ -0.54
ITGA6-210ENST00000475302 A0A0D9SFI3 127 aa11.69□□□□□ -0.54
ITGA6-210ENST00000475302 APBA3O96018 575 aa11.69□□□□□ -0.54
ITGA6-210ENST00000475302 CHGBP05060 677 aa11.69□□□□□ -0.54
ITGA6-210ENST00000475302 PTH1RQ03431 593 aa11.69□□□□□ -0.54
ITGA6-210ENST00000475302 RABEP1Q15276 862 aa11.69□□□□□ -0.54
ITGA6-210ENST00000475302 NBPF5PQ86XG9 351 aaPredicted RBP11.69□□□□□ -0.54
ITGA6-210ENST00000475302 BSDC1Q9NW68 430 aaPredicted RBP11.69□□□□□ -0.54
ITGA6-210ENST00000475302 KLRG2A4D1S0 409 aaPredicted RBP11.68□□□□□ -0.54
ITGA6-210ENST00000475302 ARID4AP29374 1257 aaPredicted RBP11.68□□□□□ -0.54
ITGA6-210ENST00000475302 DDIT3P35638 169 aa11.68□□□□□ -0.54
ITGA6-210ENST00000475302 DDR1Q08345 913 aa11.68□□□□□ -0.54
ITGA6-210ENST00000475302 BECN1Q14457 450 aa11.68□□□□□ -0.54
ITGA6-210ENST00000475302 NECTIN1Q15223 517 aa11.68□□□□□ -0.54
ITGA6-210ENST00000475302 PUM3Q15397 648 aaKnown RBP11.68□□□□□ -0.54
ITGA6-210ENST00000475302 PRR5LQ6MZQ0 368 aa11.68□□□□□ -0.54
ITGA6-210ENST00000475302 COL23A1Q86Y22 540 aaPredicted RBP11.68□□□□□ -0.54
ITGA6-210ENST00000475302 RUFY2Q8WXA3 655 aa11.68□□□□□ -0.54
ITGA6-210ENST00000475302 LPIN2Q92539 896 aa11.68□□□□□ -0.54
ITGA6-210ENST00000475302 CELF1Q92879 486 aaKnown RBP11.68□□□□□ -0.54
ITGA6-210ENST00000475302 MAP4K1Q92918 833 aa11.68□□□□□ -0.54
ITGA6-210ENST00000475302 ANO2Q9NQ90 1003 aa11.68□□□□□ -0.54
ITGA6-210ENST00000475302 DIAPH3Q9NSV4 1193 aa11.68□□□□□ -0.54
ITGA6-210ENST00000475302 PAG1Q9NWQ8 432 aa11.68□□□□□ -0.54
ITGA6-210ENST00000475302 TAF1P21675 1872 aa11.68□□□□□ -0.54
ITGA6-210ENST00000475302 IRS2Q9Y4H2 1338 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 NRXN2Q9P2S2 1712 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 SNAP23O00161 211 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 TAF5LO75529 589 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 IFIT1P09914 478 aaKnown RBP11.67□□□□□ -0.54
ITGA6-210ENST00000475302 IGHMBP2P38935 993 aaKnown RBP11.67□□□□□ -0.54
ITGA6-210ENST00000475302 MCAMP43121 646 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 CHRNDQ07001 517 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 CRY2Q49AN0 593 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 CCDC158Q5M9N0 1113 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 ZMYM1Q5SVZ6 1142 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 CCDC102BQ68D86 513 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 DDX46Q7L014 1031 aaKnown RBP11.67□□□□□ -0.54
ITGA6-210ENST00000475302 HELBQ8NG08 1087 aaPredicted RBP11.67□□□□□ -0.54
ITGA6-210ENST00000475302 NLRP3Q96P20 1036 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 CAMKK2Q96RR4 588 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 CDC5LQ99459 802 aaKnown RBP11.67□□□□□ -0.54
ITGA6-210ENST00000475302 FSD1Q9BTV5 496 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 MINPP1Q9UNW1 487 aa11.67□□□□□ -0.54
ITGA6-210ENST00000475302 CCDC171Q6TFL3 1326 aa11.66□□□□□ -0.54
ITGA6-210ENST00000475302 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
ITGA6-210ENST00000475302 WTIPA6NIX2 430 aaPredicted RBP11.66□□□□□ -0.54
ITGA6-210ENST00000475302 POLRMTO00411 1230 aaKnown RBP11.66□□□□□ -0.54
ITGA6-210ENST00000475302 GOLIM4O00461 696 aa11.66□□□□□ -0.54
ITGA6-210ENST00000475302 PHKA1P46020 1223 aa11.66□□□□□ -0.54
ITGA6-210ENST00000475302 RPS8P62241 208 aaKnown RBP11.66□□□□□ -0.54
ITGA6-210ENST00000475302 ZNF589Q86UQ0 364 aaPredicted RBP11.66□□□□□ -0.54
ITGA6-210ENST00000475302 IL27Q8NEV9 243 aa11.66□□□□□ -0.54
ITGA6-210ENST00000475302 DNAJC2Q99543 621 aaKnown RBP11.66□□□□□ -0.54
ITGA6-210ENST00000475302 MPHOSPH8Q99549 860 aa11.66□□□□□ -0.54
ITGA6-210ENST00000475302 ZNF804BA4D1E1 1349 aa11.65□□□□□ -0.54
ITGA6-210ENST00000475302 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
ITGA6-210ENST00000475302 GPR37O15354 613 aa11.65□□□□□ -0.54
ITGA6-210ENST00000475302 SERPINB2P05120 415 aa11.65□□□□□ -0.54
ITGA6-210ENST00000475302 CYP2E1P05181 493 aaPredicted RBP11.65□□□□□ -0.54
ITGA6-210ENST00000475302 HOXA10P31260 410 aaPredicted RBP11.65□□□□□ -0.54
ITGA6-210ENST00000475302 ZAP70P43403 619 aa11.65□□□□□ -0.54
ITGA6-210ENST00000475302 SLFNL1Q499Z3 407 aa11.65□□□□□ -0.54
ITGA6-210ENST00000475302 PI16Q6UXB8 463 aa11.65□□□□□ -0.54
ITGA6-210ENST00000475302 ANKRD18AQ8IVF6 992 aa11.65□□□□□ -0.54
ITGA6-210ENST00000475302 CCDC24Q8N4L8 307 aa11.65□□□□□ -0.54
ITGA6-210ENST00000475302 SEC62Q99442 399 aaKnown RBP11.65□□□□□ -0.54
ITGA6-210ENST00000475302 HELLSQ9NRZ9 838 aa11.65□□□□□ -0.54
ITGA6-210ENST00000475302 SNX14Q9Y5W7 946 aa11.65□□□□□ -0.54
ITGA6-210ENST00000475302 PNPLA7Q6ZV29 1317 aa11.64□□□□□ -0.55
ITGA6-210ENST00000475302 RNF113AO15541 343 aaKnown RBP11.64□□□□□ -0.55
ITGA6-210ENST00000475302 UQCRFS1P1P0C7P4 283 aa11.64□□□□□ -0.55
ITGA6-210ENST00000475302 SLC5A1P13866 664 aa11.64□□□□□ -0.55
ITGA6-210ENST00000475302 UBE4AQ14139 1066 aa11.64□□□□□ -0.55
ITGA6-210ENST00000475302 TSGA10IPQ3SY00 556 aa11.64□□□□□ -0.55
ITGA6-210ENST00000475302 MCMDC2Q4G0Z9 681 aa11.64□□□□□ -0.55
ITGA6-210ENST00000475302 TTC39AQ5SRH9 613 aa11.64□□□□□ -0.55
ITGA6-210ENST00000475302 CNBD1Q8NA66 436 aa11.64□□□□□ -0.55
ITGA6-210ENST00000475302 HMG20BQ9P0W2 317 aa11.64□□□□□ -0.55
ITGA6-210ENST00000475302 FOXP2O15409 715 aa11.63□□□□□ -0.55
ITGA6-210ENST00000475302 GTF2E1P29083 439 aaPredicted RBP11.63□□□□□ -0.55
ITGA6-210ENST00000475302 KIAA1211Q6ZU35 1233 aa11.63□□□□□ -0.55
ITGA6-210ENST00000475302 SAMD7Q7Z3H4 446 aa11.63□□□□□ -0.55
ITGA6-210ENST00000475302 FBXO33Q7Z6M2 555 aa11.63□□□□□ -0.55
ITGA6-210ENST00000475302 FLAD1Q8NFF5 587 aa11.63□□□□□ -0.55
ITGA6-210ENST00000475302 TTC14Q96N46 770 aa11.63□□□□□ -0.55
ITGA6-210ENST00000475302 PIH1D3Q9NQM4 214 aaKnown RBP11.63□□□□□ -0.55
ITGA6-210ENST00000475302 QSER1Q2KHR3 1735 aa11.63□□□□□ -0.55
ITGA6-210ENST00000475302 ANKRD31Q8N7Z5 1873 aa11.62□□□□□ -0.55
ITGA6-210ENST00000475302 K7ELQ4 463 aaPredicted RBP11.62□□□□□ -0.55
ITGA6-210ENST00000475302 FECHP22830 423 aa11.62□□□□□ -0.55
ITGA6-210ENST00000475302 MCCP23508 829 aa11.62□□□□□ -0.55
ITGA6-210ENST00000475302 FKBP4Q02790 459 aaKnown RBP eCLIP11.62□□□□□ -0.55
ITGA6-210ENST00000475302 RASGRF1Q13972 1273 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms