RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SH3GL3Q99963 347 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 AVENQ9NQS1 362 aaPredicted RBP5.69□□□□□ -1.5
NPHP3-206ENST00000474871 PSD3Q9NYI0 1048 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 PGAP2Q9UHJ9 254 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 NRXN1Q9ULB1 1477 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 PPLO60437 1756 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 CCP110O43303 1012 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 HMMRO75330 724 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 PTPROQ16827 1216 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 FAAH2Q6GMR7 532 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 MILR1Q7Z6M3 343 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 CORO1BQ9BR76 489 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 DHX8Q14562 1220 aaKnown RBP5.69□□□□□ -1.5
NPHP3-206ENST00000474871 C10orf62Q5T681 223 aaPredicted RBP5.69□□□□□ -1.5
NPHP3-206ENST00000474871 SPATA21Q7Z572 469 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 NPAS4Q8IUM7 802 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.69□□□□□ -1.5
NPHP3-206ENST00000474871 BHMTQ93088 406 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 SIRT5Q9NXA8 310 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 TBK1Q9UHD2 729 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 EID1Q9Y6B2 187 aa5.69□□□□□ -1.5
NPHP3-206ENST00000474871 IQSEC2Q5JU85 1478 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 MAP2K2P36507 400 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 PABPC4Q13310 644 aaKnown RBP eCLIP5.68□□□□□ -1.5
NPHP3-206ENST00000474871 MAPRE1Q15691 268 aaKnown RBP5.68□□□□□ -1.5
NPHP3-206ENST00000474871 FILIP1LQ4L180 1135 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 LGR6Q9HBX8 967 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 ST7Q9NRC1 585 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 ISY1Q9ULR0 285 aaKnown RBP5.68□□□□□ -1.5
NPHP3-206ENST00000474871 ABCC11Q96J66 1382 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 ZNF16P17020 682 aaPredicted RBP5.68□□□□□ -1.5
NPHP3-206ENST00000474871 PKN2Q16513 984 aaKnown RBP5.68□□□□□ -1.5
NPHP3-206ENST00000474871 TRIML1Q8N9V2 468 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 BTBD6Q96KE9 485 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 HAUS7Q99871 368 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 IER2Q9BTL4 223 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 ZSCAN16Q9H4T2 348 aaPredicted RBP5.68□□□□□ -1.5
NPHP3-206ENST00000474871 ATP8A1Q9Y2Q0 1164 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 COL17A1Q9UMD9 1497 aaPredicted RBP5.68□□□□□ -1.5
NPHP3-206ENST00000474871 ARHGEF40Q8TER5 1519 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 GLULP15104 373 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 PRPF4BQ13523 1007 aaKnown RBP5.68□□□□□ -1.5
NPHP3-206ENST00000474871 TSR1Q2NL82 804 aaKnown RBP5.68□□□□□ -1.5
NPHP3-206ENST00000474871 CCDC144BQ3MJ40 725 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 DRC7Q8IY82 874 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 KIF18AQ8NI77 898 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 B3GNT4Q9C0J1 378 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 XPO7Q9UIA9 1087 aaKnown RBP5.68□□□□□ -1.5
NPHP3-206ENST00000474871 PREX1Q8TCU6 1659 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 PDLIM1O00151 329 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 CCDC73Q6ZRK6 1079 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 TAS1R3Q7RTX0 852 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 TAX1BP1Q86VP1 789 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 ANKRD18AQ8IVF6 992 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 NKAIN3Q8N8D7 197 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 SMYD1Q8NB12 490 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 ZBTB10Q96DT7 871 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 CDHR1Q96JP9 859 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 BRD8Q9H0E9 1235 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 SFMBT1Q9UHJ3 866 aa5.68□□□□□ -1.5
NPHP3-206ENST00000474871 GTPBP6O43824 516 aaPredicted RBP5.67□□□□□ -1.5
NPHP3-206ENST00000474871 RTN3O95197 1032 aaPredicted RBP5.67□□□□□ -1.5
NPHP3-206ENST00000474871 CBLBQ13191 982 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 EMC10Q5UCC4 262 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 GIMAP8Q8ND71 665 aaPredicted RBP5.67□□□□□ -1.5
NPHP3-206ENST00000474871 SH3KBP1Q96B97 665 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 NOS1P29475 1434 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 AGLP35573 1532 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 ST20-MTHFSA0A0A6YYL1 179 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 ATP9BO43861 1147 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 PRLRP16471 622 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 CD53P19397 219 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 CSE1LP55060 971 aaKnown RBP5.67□□□□□ -1.5
NPHP3-206ENST00000474871 CCDC92Q53HC0 331 aaPredicted RBP5.67□□□□□ -1.5
NPHP3-206ENST00000474871 ISM2Q6H9L7 571 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 SLAIN1Q8ND83 568 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 ZFPM2Q8WW38 1151 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 TRIM11Q96F44 468 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.67□□□□□ -1.5
NPHP3-206ENST00000474871 RIMKLBQ9ULI2 386 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 SPDYE3A6NKU9 549 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 PRKAR2BP31323 418 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 UBE4AQ14139 1066 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 DDX27Q96GQ7 796 aaKnown RBP5.67□□□□□ -1.5
NPHP3-206ENST00000474871 TACO1Q9BSH4 297 aaKnown RBP5.67□□□□□ -1.5
NPHP3-206ENST00000474871 CAPS2Q9BXY5 557 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 TBC1D2Q9BYX2 928 aa5.67□□□□□ -1.5
NPHP3-206ENST00000474871 MYO3AQ8NEV4 1616 aa5.66□□□□□ -1.5
NPHP3-206ENST00000474871 FAM177BA6PVY3 158 aa5.66□□□□□ -1.5
NPHP3-206ENST00000474871 TBKBP1A7MCY6 615 aa5.66□□□□□ -1.5
NPHP3-206ENST00000474871 HOXA2O43364 376 aa5.66□□□□□ -1.5
NPHP3-206ENST00000474871 CAMK2BQ13554 666 aa5.66□□□□□ -1.5
NPHP3-206ENST00000474871 NEK10Q6ZWH5 1172 aa5.66□□□□□ -1.5
NPHP3-206ENST00000474871 C2orf49Q9BVC5 232 aaPredicted RBP5.66□□□□□ -1.5
NPHP3-206ENST00000474871 TTF2Q9UNY4 1162 aaKnown RBP5.66□□□□□ -1.5
NPHP3-206ENST00000474871 SETBP1Q9Y6X0 1596 aa5.66□□□□□ -1.5
NPHP3-206ENST00000474871 EVC2Q86UK5 1308 aa5.66□□□□□ -1.5
NPHP3-206ENST00000474871 DDIT3P35638 169 aa5.66□□□□□ -1.5
NPHP3-206ENST00000474871 KIF4BQ2VIQ3 1234 aa5.66□□□□□ -1.5
NPHP3-206ENST00000474871 KLHDC4Q8TBB5 520 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms