RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 FMR1Q06787 632 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCDC39-202ENST00000471307 STOML1Q9UBI4 398 aa10.35□□□□□ -0.75
CCDC39-202ENST00000471307 PNMA6FA0A0J9YX94 578 aa10.34□□□□□ -0.75
CCDC39-202ENST00000471307 PDIA4P13667 645 aaKnown RBP10.34□□□□□ -0.75
CCDC39-202ENST00000471307 FSTP19883 344 aa10.34□□□□□ -0.75
CCDC39-202ENST00000471307 GLIS3Q8NEA6 775 aa10.34□□□□□ -0.75
CCDC39-202ENST00000471307 TIAF1O95411 115 aa10.33□□□□□ -0.76
CCDC39-202ENST00000471307 PREPP48147 710 aa10.33□□□□□ -0.76
CCDC39-202ENST00000471307 FAM20CQ8IXL6 584 aa10.33□□□□□ -0.76
CCDC39-202ENST00000471307 AP3B2Q13367 1082 aa10.32□□□□□ -0.76
CCDC39-202ENST00000471307 CLEC10AQ8IUN9 316 aa10.32□□□□□ -0.76
CCDC39-202ENST00000471307 Q8N3U1 123 aa10.32□□□□□ -0.76
CCDC39-202ENST00000471307 GAS2O43903 313 aaKnown RBP10.31□□□□□ -0.76
CCDC39-202ENST00000471307 DLGAP3O95886 979 aa10.31□□□□□ -0.76
CCDC39-202ENST00000471307 MAOBP27338 520 aa10.31□□□□□ -0.76
CCDC39-202ENST00000471307 POU4F3Q15319 338 aa10.31□□□□□ -0.76
CCDC39-202ENST00000471307 CORO1BQ9BR76 489 aa10.31□□□□□ -0.76
CCDC39-202ENST00000471307 TRIM56Q9BRZ2 755 aaKnown RBP10.31□□□□□ -0.76
CCDC39-202ENST00000471307 BCO2Q9BYV7 579 aa10.31□□□□□ -0.76
CCDC39-202ENST00000471307 SRCIN1Q9C0H9 1055 aa10.31□□□□□ -0.76
CCDC39-202ENST00000471307 RNF112Q9ULX5 631 aa10.31□□□□□ -0.76
CCDC39-202ENST00000471307 BMP3P12645 472 aa10.3□□□□□ -0.76
CCDC39-202ENST00000471307 ALG1LQ6GMV1 187 aa10.3□□□□□ -0.76
CCDC39-202ENST00000471307 DTHD1Q6ZMT9 781 aa10.3□□□□□ -0.76
CCDC39-202ENST00000471307 C12orf50Q8NA57 414 aaPredicted RBP10.3□□□□□ -0.76
CCDC39-202ENST00000471307 FAM83CQ9BQN1 747 aa10.3□□□□□ -0.76
CCDC39-202ENST00000471307 IGLV1-40P01703 118 aa10.29□□□□□ -0.76
CCDC39-202ENST00000471307 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC39-202ENST00000471307 PI16Q6UXB8 463 aa10.29□□□□□ -0.76
CCDC39-202ENST00000471307 SYNGAP1Q96PV0 1343 aa10.29□□□□□ -0.76
CCDC39-202ENST00000471307 GIPC1O14908 333 aa10.28□□□□□ -0.76
CCDC39-202ENST00000471307 MAPK8P45983 427 aa10.28□□□□□ -0.76
CCDC39-202ENST00000471307 FCGRTP55899 365 aa10.28□□□□□ -0.76
CCDC39-202ENST00000471307 ATP2B2Q01814 1243 aa10.28□□□□□ -0.76
CCDC39-202ENST00000471307 NFIAQ12857 509 aa10.28□□□□□ -0.76
CCDC39-202ENST00000471307 C7orf69Q9H7B7 122 aa10.28□□□□□ -0.76
CCDC39-202ENST00000471307 HNRNPUQ00839 825 aaKnown RBP eCLIP10.27□□□□□ -0.77
CCDC39-202ENST00000471307 PPP2R3AQ06190 1150 aa10.27□□□□□ -0.77
CCDC39-202ENST00000471307 SOX4Q06945 474 aaPredicted RBP10.27□□□□□ -0.77
CCDC39-202ENST00000471307 RNF43Q68DV7 783 aa10.27□□□□□ -0.77
CCDC39-202ENST00000471307 BEND4Q6ZU67 534 aa10.27□□□□□ -0.77
CCDC39-202ENST00000471307 SND1Q7KZF4 910 aaKnown RBP eCLIP10.27□□□□□ -0.77
CCDC39-202ENST00000471307 TRIM42Q8IWZ5 723 aa10.27□□□□□ -0.77
CCDC39-202ENST00000471307 KCNF1Q9H3M0 494 aa10.27□□□□□ -0.77
CCDC39-202ENST00000471307 SCO2A0A1W2PP80 73 aa10.26□□□□□ -0.77
CCDC39-202ENST00000471307 FAAP100Q0VG06 881 aa10.26□□□□□ -0.77
CCDC39-202ENST00000471307 LRP8Q14114 963 aa10.26□□□□□ -0.77
CCDC39-202ENST00000471307 ARTNQ5T4W7 220 aa10.26□□□□□ -0.77
CCDC39-202ENST00000471307 DBNDD2Q9BQY9 259 aa10.26□□□□□ -0.77
CCDC39-202ENST00000471307 TMEM39AQ9NV64 488 aa10.26□□□□□ -0.77
CCDC39-202ENST00000471307 ADH5P11766 374 aa10.25□□□□□ -0.77
CCDC39-202ENST00000471307 MAP4P27816 1152 aaKnown RBP10.25□□□□□ -0.77
CCDC39-202ENST00000471307 COL19A1Q14993 1142 aa10.25□□□□□ -0.77
CCDC39-202ENST00000471307 NXPE4Q6UWF7 544 aa10.25□□□□□ -0.77
CCDC39-202ENST00000471307 AEBP1Q8IUX7 1158 aa10.25□□□□□ -0.77
CCDC39-202ENST00000471307 YIPF2Q9BWQ6 316 aa10.25□□□□□ -0.77
CCDC39-202ENST00000471307 HMX2A2RU54 273 aa10.24□□□□□ -0.77
CCDC39-202ENST00000471307 CTSBP07858 339 aa10.24□□□□□ -0.77
CCDC39-202ENST00000471307 GSTT1P30711 240 aa10.24□□□□□ -0.77
CCDC39-202ENST00000471307 FGD1P98174 961 aa10.24□□□□□ -0.77
CCDC39-202ENST00000471307 C2CD4AQ8NCU7 369 aaPredicted RBP10.24□□□□□ -0.77
CCDC39-202ENST00000471307 ZFP64Q9NPA5 681 aa10.24□□□□□ -0.77
CCDC39-202ENST00000471307 USP11P51784 963 aa10.23□□□□□ -0.77
CCDC39-202ENST00000471307 SGO2Q562F6 1265 aa10.23□□□□□ -0.77
CCDC39-202ENST00000471307 FRMD6Q96NE9 622 aa10.23□□□□□ -0.77
CCDC39-202ENST00000471307 RAD18Q9NS91 495 aa10.23□□□□□ -0.77
CCDC39-202ENST00000471307 GPN3Q9UHW5 284 aaPredicted RBP10.23□□□□□ -0.77
CCDC39-202ENST00000471307 PPM1HQ9ULR3 514 aa10.23□□□□□ -0.77
CCDC39-202ENST00000471307 SPG7Q9UQ90 795 aa10.23□□□□□ -0.77
CCDC39-202ENST00000471307 DRD2P14416 443 aa10.22□□□□□ -0.77
CCDC39-202ENST00000471307 ANKRD24Q8TF21 1146 aa10.22□□□□□ -0.77
CCDC39-202ENST00000471307 EZH1Q92800 747 aaPredicted RBP10.22□□□□□ -0.77
CCDC39-202ENST00000471307 KRT82Q9NSB4 513 aa10.22□□□□□ -0.77
CCDC39-202ENST00000471307 ECEL1O95672 775 aa10.21□□□□□ -0.77
CCDC39-202ENST00000471307 P4HBP07237 508 aaKnown RBP10.21□□□□□ -0.77
CCDC39-202ENST00000471307 RXRBP28702 533 aa10.21□□□□□ -0.77
CCDC39-202ENST00000471307 PDE3AQ14432 1141 aa10.21□□□□□ -0.77
CCDC39-202ENST00000471307 XP32Q5T750 250 aa10.21□□□□□ -0.77
CCDC39-202ENST00000471307 C3orf58Q8NDZ4 430 aa10.21□□□□□ -0.77
CCDC39-202ENST00000471307 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.2□□□□□ -0.78
CCDC39-202ENST00000471307 FAM95CA0A1B0GW59 222 aa10.2□□□□□ -0.78
CCDC39-202ENST00000471307 AOC2O75106 756 aa10.2□□□□□ -0.78
CCDC39-202ENST00000471307 ZNF157P51786 506 aaPredicted RBP10.2□□□□□ -0.78
CCDC39-202ENST00000471307 ZDHHC13Q8IUH4 622 aa10.2□□□□□ -0.78
CCDC39-202ENST00000471307 GIMAP7Q8NHV1 300 aa10.2□□□□□ -0.78
CCDC39-202ENST00000471307 WDR18Q9BV38 432 aa10.2□□□□□ -0.78
CCDC39-202ENST00000471307 CEP44Q9C0F1 390 aa10.2□□□□□ -0.78
CCDC39-202ENST00000471307 GSX1Q9H4S2 264 aaPredicted RBP10.2□□□□□ -0.78
CCDC39-202ENST00000471307 AKAP2Q9Y2D5 859 aa10.2□□□□□ -0.78
CCDC39-202ENST00000471307 LDHBP07195 334 aaKnown RBP10.19□□□□□ -0.78
CCDC39-202ENST00000471307 GSTP1P09211 210 aaKnown RBP10.19□□□□□ -0.78
CCDC39-202ENST00000471307 AKAP4Q5JQC9 854 aa10.19□□□□□ -0.78
CCDC39-202ENST00000471307 PAOXQ6QHF9 649 aa10.19□□□□□ -0.78
CCDC39-202ENST00000471307 OSBPL7Q9BZF2 842 aa10.19□□□□□ -0.78
CCDC39-202ENST00000471307 FAM8A1Q9UBU6 413 aa10.19□□□□□ -0.78
CCDC39-202ENST00000471307 ACTL7BQ9Y614 415 aa10.19□□□□□ -0.78
CCDC39-202ENST00000471307 CPSF6Q16630 551 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC39-202ENST00000471307 CDPF1Q6NVV7 123 aa10.18□□□□□ -0.78
CCDC39-202ENST00000471307 FBLIM1Q8WUP2 373 aa10.18□□□□□ -0.78
CCDC39-202ENST00000471307 EMILIN2Q9BXX0 1053 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms