RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 DHX38Q92620 1227 aaKnown RBP8.23□□□□□ -1.09
RBM39-227ENST00000470563 SMG9Q9H0W8 520 aaKnown RBP8.23□□□□□ -1.09
RBM39-227ENST00000470563 MINDY4BA8MYZ0 360 aa8.22□□□□□ -1.09
RBM39-227ENST00000470563 CILPO75339 1184 aa8.22□□□□□ -1.09
RBM39-227ENST00000470563 TRIM37O94972 964 aa8.22□□□□□ -1.09
RBM39-227ENST00000470563 CPB1P15086 417 aa8.22□□□□□ -1.09
RBM39-227ENST00000470563 ARNTP27540 789 aa8.22□□□□□ -1.09
RBM39-227ENST00000470563 CDC27P30260 824 aa8.22□□□□□ -1.09
RBM39-227ENST00000470563 NFX1Q12986 1120 aaKnown RBP8.22□□□□□ -1.09
RBM39-227ENST00000470563 GOLM1Q8NBJ4 401 aa8.22□□□□□ -1.09
RBM39-227ENST00000470563 MIR1-1HGQ9H1L0 117 aa8.22□□□□□ -1.09
RBM39-227ENST00000470563 OSGEPQ9NPF4 335 aa8.22□□□□□ -1.09
RBM39-227ENST00000470563 PPP1R1BQ9UD71 204 aaPredicted RBP8.22□□□□□ -1.09
RBM39-227ENST00000470563 TLR6Q9Y2C9 796 aa8.22□□□□□ -1.09
RBM39-227ENST00000470563 FAM177BA6PVY3 158 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 EPXP11678 715 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 ALAS2P22557 587 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 CABP4P57796 275 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 PIP4K2BP78356 416 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 SERINC3Q13530 473 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 ADAMTSL4Q6UY14 1074 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 LRP10Q7Z4F1 713 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 SULF2Q8IWU5 870 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 RBBP8NLQ8NC74 664 aaPredicted RBP8.21□□□□□ -1.1
RBM39-227ENST00000470563 GAL3ST3Q96A11 431 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 KRT82Q9NSB4 513 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 GINM1Q9NU53 330 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 TRIM33Q9UPN9 1127 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 STARD13Q9Y3M8 1113 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 TACC3Q9Y6A5 838 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 IGF1RP08069 1367 aa8.21□□□□□ -1.1
RBM39-227ENST00000470563 IMPDH2P12268 514 aa8.2□□□□□ -1.1
RBM39-227ENST00000470563 NASPP49321 788 aaPredicted RBP8.2□□□□□ -1.1
RBM39-227ENST00000470563 APOBRQ0VD83 1088 aa8.2□□□□□ -1.1
RBM39-227ENST00000470563 IKBKEQ14164 716 aa8.2□□□□□ -1.1
RBM39-227ENST00000470563 PSAPL1Q6NUJ1 521 aa8.2□□□□□ -1.1
RBM39-227ENST00000470563 LLGL2Q6P1M3 1020 aa8.2□□□□□ -1.1
RBM39-227ENST00000470563 MAP4K3Q8IVH8 894 aa8.2□□□□□ -1.1
RBM39-227ENST00000470563 GPR161Q8N6U8 529 aaKnown RBP8.2□□□□□ -1.1
RBM39-227ENST00000470563 OR6P1Q8NGX9 317 aa8.2□□□□□ -1.1
RBM39-227ENST00000470563 NKD1Q969G9 470 aa8.2□□□□□ -1.1
RBM39-227ENST00000470563 DNAJC2Q99543 621 aaKnown RBP8.2□□□□□ -1.1
RBM39-227ENST00000470563 NRSN2Q9GZP1 204 aa8.2□□□□□ -1.1
RBM39-227ENST00000470563 GGA1Q9UJY5 639 aa8.2□□□□□ -1.1
RBM39-227ENST00000470563 EFR3BQ9Y2G0 817 aa8.2□□□□□ -1.1
RBM39-227ENST00000470563 SYNGAP1Q96PV0 1343 aa8.2□□□□□ -1.1
RBM39-227ENST00000470563 NEURL1BA8MQ27 555 aa8.19□□□□□ -1.1
RBM39-227ENST00000470563 RGS9O75916 674 aaPredicted RBP8.19□□□□□ -1.1
RBM39-227ENST00000470563 CRKP46108 304 aa8.19□□□□□ -1.1
RBM39-227ENST00000470563 BAG6P46379 1132 aa8.19□□□□□ -1.1
RBM39-227ENST00000470563 MAP3K11Q16584 847 aa8.19□□□□□ -1.1
RBM39-227ENST00000470563 CKAP2LQ8IYA6 745 aa8.19□□□□□ -1.1
RBM39-227ENST00000470563 OSBPL2Q9H1P3 480 aa8.19□□□□□ -1.1
RBM39-227ENST00000470563 ATE1O95260 518 aa8.18□□□□□ -1.1
RBM39-227ENST00000470563 F13A1P00488 732 aa8.18□□□□□ -1.1
RBM39-227ENST00000470563 SSBP05455 408 aaKnown RBP eCLIP8.18□□□□□ -1.1
RBM39-227ENST00000470563 EPHA1P21709 976 aa8.18□□□□□ -1.1
RBM39-227ENST00000470563 HNRNPUQ00839 825 aaKnown RBP eCLIP8.18□□□□□ -1.1
RBM39-227ENST00000470563 CWF19L2Q2TBE0 894 aaKnown RBP8.18□□□□□ -1.1
RBM39-227ENST00000470563 RASIP1Q5U651 963 aa8.18□□□□□ -1.1
RBM39-227ENST00000470563 REC114Q7Z4M0 266 aa8.18□□□□□ -1.1
RBM39-227ENST00000470563 IGFLR1Q9H665 355 aa8.18□□□□□ -1.1
RBM39-227ENST00000470563 EHMT1Q9H9B1 1298 aa8.18□□□□□ -1.1
RBM39-227ENST00000470563 UBP1Q9NZI7 540 aa8.18□□□□□ -1.1
RBM39-227ENST00000470563 PRKAG3Q9UGI9 489 aa8.18□□□□□ -1.1
RBM39-227ENST00000470563 PRR36Q9H6K5 1346 aa8.18□□□□□ -1.1
RBM39-227ENST00000470563 SOX1O00570 391 aaPredicted RBP8.17□□□□□ -1.1
RBM39-227ENST00000470563 TM4SF5O14894 197 aa8.17□□□□□ -1.1
RBM39-227ENST00000470563 KLF4O43474 513 aa8.17□□□□□ -1.1
RBM39-227ENST00000470563 ZNF165P49910 485 aa8.17□□□□□ -1.1
RBM39-227ENST00000470563 RPL6Q02878 288 aaKnown RBP8.17□□□□□ -1.1
RBM39-227ENST00000470563 FAM160A1Q05DH4 1040 aa8.17□□□□□ -1.1
RBM39-227ENST00000470563 TBC1D8BQ0IIM8 1120 aa8.17□□□□□ -1.1
RBM39-227ENST00000470563 NFE2L2Q16236 605 aa8.17□□□□□ -1.1
RBM39-227ENST00000470563 CCDC144BQ3MJ40 725 aa8.17□□□□□ -1.1
RBM39-227ENST00000470563 TNNI3KQ59H18 835 aa8.17□□□□□ -1.1
RBM39-227ENST00000470563 DCAF11Q8TEB1 546 aa8.17□□□□□ -1.1
RBM39-227ENST00000470563 SHDQ96IW2 340 aa8.17□□□□□ -1.1
RBM39-227ENST00000470563 SRRTQ9BXP5 876 aaKnown RBP8.17□□□□□ -1.1
RBM39-227ENST00000470563 ZNF408Q9H9D4 720 aa8.17□□□□□ -1.1
RBM39-227ENST00000470563 SIRPGQ9P1W8 387 aa8.17□□□□□ -1.1
RBM39-227ENST00000470563 ZNRF3Q9ULT6 936 aa8.17□□□□□ -1.1
RBM39-227ENST00000470563 GSTP1P09211 210 aaKnown RBP8.16□□□□□ -1.1
RBM39-227ENST00000470563 SLURP2P0DP57 97 aa8.16□□□□□ -1.1
RBM39-227ENST00000470563 LMNB1P20700 586 aa8.16□□□□□ -1.1
RBM39-227ENST00000470563 GIPRP48546 466 aa8.16□□□□□ -1.1
RBM39-227ENST00000470563 BNC2Q6ZN30 1099 aaPredicted RBP8.16□□□□□ -1.1
RBM39-227ENST00000470563 FAM177A1Q8N128 213 aaPredicted RBP8.16□□□□□ -1.1
RBM39-227ENST00000470563 STK35Q8TDR2 534 aa8.16□□□□□ -1.1
RBM39-227ENST00000470563 COL25A1Q9BXS0 654 aaPredicted RBP8.16□□□□□ -1.1
RBM39-227ENST00000470563 PPME1Q9Y570 386 aa8.16□□□□□ -1.1
RBM39-227ENST00000470563 PCDHB5Q9Y5E4 795 aa8.16□□□□□ -1.1
RBM39-227ENST00000470563 CYP11A1P05108 521 aa8.15□□□□□ -1.1
RBM39-227ENST00000470563 ARL4DP49703 201 aa8.15□□□□□ -1.1
RBM39-227ENST00000470563 AFF1P51825 1210 aaKnown RBP8.15□□□□□ -1.1
RBM39-227ENST00000470563 HP1BP3Q5SSJ5 553 aaPredicted RBP8.15□□□□□ -1.1
RBM39-227ENST00000470563 DTWD1Q8N5C7 304 aa8.15□□□□□ -1.1
RBM39-227ENST00000470563 KLHL23Q8NBE8 558 aa8.15□□□□□ -1.1
RBM39-227ENST00000470563 SH2B1Q9NRF2 756 aaPredicted RBP8.15□□□□□ -1.1
RBM39-227ENST00000470563 MEIS3P2A8K0S8 358 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms