RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ZNF213O14771 459 aa21.54■■□□□ 1.04
SMC4-211ENST00000469858 TOB2Q14106 344 aaPredicted RBP21.54■■□□□ 1.04
SMC4-211ENST00000469858 MASTLQ96GX5 879 aa21.54■■□□□ 1.04
SMC4-211ENST00000469858 ZSCAN31Q96LW9 406 aaPredicted RBP21.54■■□□□ 1.04
SMC4-211ENST00000469858 ALDH8A1Q9H2A2 487 aaPredicted RBP21.54■■□□□ 1.04
SMC4-211ENST00000469858 ATP6V0A2Q9Y487 856 aa21.54■■□□□ 1.04
SMC4-211ENST00000469858 ALDH1B1P30837 517 aa21.54■■□□□ 1.04
SMC4-211ENST00000469858 NAA16Q6N069 864 aaPredicted RBP21.54■■□□□ 1.04
SMC4-211ENST00000469858 TBC1D16Q8TBP0 767 aa21.54■■□□□ 1.04
SMC4-211ENST00000469858 PDGFDQ9GZP0 370 aaPredicted RBP21.54■■□□□ 1.04
SMC4-211ENST00000469858 SH2B1Q9NRF2 756 aaPredicted RBP21.54■■□□□ 1.04
SMC4-211ENST00000469858 POLLQ9UGP5 575 aa21.54■■□□□ 1.04
SMC4-211ENST00000469858 TPCN1Q9ULQ1 816 aa21.54■■□□□ 1.04
SMC4-211ENST00000469858 PATL2C9JE40 543 aaKnown RBP21.53■■□□□ 1.04
SMC4-211ENST00000469858 ME3Q16798 604 aa21.53■■□□□ 1.04
SMC4-211ENST00000469858 TDRD7Q8NHU6 1098 aaKnown RBP21.53■■□□□ 1.04
SMC4-211ENST00000469858 C6orf229H3BNL8 230 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 PRDX5P30044 214 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 Q6ZUG5 572 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 DHX32Q7L7V1 743 aaKnown RBP21.52■■□□□ 1.04
SMC4-211ENST00000469858 ZNF384Q8TF68 577 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 TNPO1Q92973 898 aaKnown RBP21.52■■□□□ 1.04
SMC4-211ENST00000469858 ZNF622Q969S3 477 aaKnown RBP eCLIP21.52■■□□□ 1.047e-8■■□□□ 12
SMC4-211ENST00000469858 LRRC2Q9BYS8 371 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 EPB41L4AQ9HCS5 686 aaPredicted RBP21.52■■□□□ 1.04
SMC4-211ENST00000469858 CHD4Q14839 1912 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 MAGEB6P1A0A0J9YX57 407 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 ZBTB22O15209 634 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 PRKAB2O43741 272 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 GNAT2P19087 354 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 NUCB2P80303 420 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 MECOMQ03112 1051 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 PKP1Q13835 747 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 C2CD5Q86YS7 1000 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 CCDC83Q8IWF9 413 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 NSUN4Q96CB9 384 aaKnown RBP21.52■■□□□ 1.04
SMC4-211ENST00000469858 NAPBQ9H115 298 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 SLC4A4Q9Y6R1 1079 aa21.52■■□□□ 1.04
SMC4-211ENST00000469858 FGD1P98174 961 aa21.51■■□□□ 1.03
SMC4-211ENST00000469858 OLFM4Q6UX06 510 aa21.51■■□□□ 1.03
SMC4-211ENST00000469858 IFNL3Q8IZI9 196 aa21.51■■□□□ 1.03
SMC4-211ENST00000469858 GSG1L2A8MUP6 293 aa21.5■■□□□ 1.03
SMC4-211ENST00000469858 ALX1Q15699 326 aa21.5■■□□□ 1.03
SMC4-211ENST00000469858 WDR66Q8TBY9 1149 aa21.5■■□□□ 1.03
SMC4-211ENST00000469858 CD209Q9NNX6 404 aa21.5■■□□□ 1.03
SMC4-211ENST00000469858 ZMYM6O95789 1325 aa21.5■■□□□ 1.03
SMC4-211ENST00000469858 NECAB1Q8N987 351 aa21.5■■□□□ 1.03
SMC4-211ENST00000469858 NBPF3Q9H094 633 aa21.5■■□□□ 1.03
SMC4-211ENST00000469858 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.5■■□□□ 1.03
SMC4-211ENST00000469858 H0YIN7 160 aa21.49■■□□□ 1.03
SMC4-211ENST00000469858 DUOX1Q9NRD9 1551 aa21.49■■□□□ 1.03
SMC4-211ENST00000469858 SALL1Q9NSC2 1324 aa21.49■■□□□ 1.03
SMC4-211ENST00000469858 TDO2P48775 406 aa21.48■■□□□ 1.03
SMC4-211ENST00000469858 EXOSC10Q01780 885 aaKnown RBP21.48■■□□□ 1.03
SMC4-211ENST00000469858 ST3GAL1Q11201 340 aa21.48■■□□□ 1.03
SMC4-211ENST00000469858 SPTY2D1Q68D10 685 aaPredicted RBP21.48■■□□□ 1.03
SMC4-211ENST00000469858 CHST3Q7LGC8 479 aa21.48■■□□□ 1.03
SMC4-211ENST00000469858 DZIP1Q86YF9 867 aaKnown RBP21.48■■□□□ 1.03
SMC4-211ENST00000469858 TBC1D10CQ8IV04 446 aa21.48■■□□□ 1.03
SMC4-211ENST00000469858 BRF1Q92994 677 aa21.48■■□□□ 1.03
SMC4-211ENST00000469858 RIOK1Q9BRS2 568 aaKnown RBP21.48■■□□□ 1.03
SMC4-211ENST00000469858 NACAP1Q9BZK3 213 aa21.48■■□□□ 1.03
SMC4-211ENST00000469858 KIAA1551Q9HCM1 1747 aa21.48■■□□□ 1.03
SMC4-211ENST00000469858 DYNLL1P63167 89 aaKnown RBP21.48■■□□□ 1.03
SMC4-211ENST00000469858 RALYLQ86SE5 291 aaKnown RBP21.48■■□□□ 1.03
SMC4-211ENST00000469858 MPNDQ8N594 471 aa21.48■■□□□ 1.03
SMC4-211ENST00000469858 NCOA7Q8NI08 942 aa21.48■■□□□ 1.03
SMC4-211ENST00000469858 TMX4Q9H1E5 349 aaPredicted RBP21.48■■□□□ 1.03
SMC4-211ENST00000469858 SLX4Q8IY92 1834 aa21.47■■□□□ 1.03
SMC4-211ENST00000469858 IL1R1P14778 569 aa21.47■■□□□ 1.03
SMC4-211ENST00000469858 SDR42E1Q8WUS8 393 aa21.47■■□□□ 1.03
SMC4-211ENST00000469858 RIMBP2O15034 1052 aa21.47■■□□□ 1.03
SMC4-211ENST00000469858 LDHBP07195 334 aaKnown RBP21.47■■□□□ 1.03
SMC4-211ENST00000469858 CHRNA5P30532 468 aa21.47■■□□□ 1.03
SMC4-211ENST00000469858 STK3Q13188 491 aa21.47■■□□□ 1.03
SMC4-211ENST00000469858 STYK1Q6J9G0 422 aa21.47■■□□□ 1.03
SMC4-211ENST00000469858 DPP8Q6V1X1 898 aaPredicted RBP21.47■■□□□ 1.03
SMC4-211ENST00000469858 SMC3Q9UQE7 1217 aa21.47■■□□□ 1.03
SMC4-211ENST00000469858 BAZ2AQ9UIF9 1905 aaKnown RBP21.46■■□□□ 1.03
SMC4-211ENST00000469858 TRDNQ13061 729 aa21.46■■□□□ 1.03
SMC4-211ENST00000469858 MB21D2Q8IYB1 491 aaPredicted RBP21.46■■□□□ 1.03
SMC4-211ENST00000469858 MCM4P33991 863 aa21.45■■□□□ 1.02
SMC4-211ENST00000469858 GBP4Q96PP9 640 aa21.45■■□□□ 1.02
SMC4-211ENST00000469858 AATFQ9NY61 560 aaKnown RBP eCLIP21.45■■□□□ 1.024e-8■■■■■ 116
SMC4-211ENST00000469858 TIAM2Q8IVF5 1701 aa21.45■■□□□ 1.02
SMC4-211ENST00000469858 DTNBO60941 627 aa21.45■■□□□ 1.02
SMC4-211ENST00000469858 MCM5P33992 734 aa21.45■■□□□ 1.02
SMC4-211ENST00000469858 AGXT2Q9BYV1 514 aa21.45■■□□□ 1.02
SMC4-211ENST00000469858 ZDHHC9Q9Y397 364 aa21.45■■□□□ 1.02
SMC4-211ENST00000469858 PRC1O43663 620 aa21.44■■□□□ 1.02
SMC4-211ENST00000469858 CTDSPL2Q05D32 466 aa21.44■■□□□ 1.02
SMC4-211ENST00000469858 MYH2Q9UKX2 1941 aa21.44■■□□□ 1.02
SMC4-211ENST00000469858 APOBRQ0VD83 1088 aa21.43■■□□□ 1.02
SMC4-211ENST00000469858 GRIK5Q16478 980 aa21.43■■□□□ 1.02
SMC4-211ENST00000469858 TMED8Q6PL24 325 aaPredicted RBP21.43■■□□□ 1.02
SMC4-211ENST00000469858 ZC3H12CQ9C0D7 883 aaKnown RBP21.43■■□□□ 1.02
SMC4-211ENST00000469858 GJB2P29033 226 aa21.43■■□□□ 1.02
SMC4-211ENST00000469858 FOXD4L5Q5VV16 416 aaPredicted RBP21.43■■□□□ 1.02
SMC4-211ENST00000469858 CCDC125Q86Z20 511 aa21.43■■□□□ 1.02
SMC4-211ENST00000469858 FOXD4L4Q8WXT5 416 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms