RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 NCOA5Q9HCD5 579 aaKnown RBP16.57■□□□□ 0.24
SMARCD3-205ENST00000469154 M0R2C6 588 aa16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 GNPATO15228 680 aa16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 HLFQ16534 295 aa16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 LRRC24Q50LG9 513 aa16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 PROM2Q8N271 834 aa16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 FSIP1Q8NA03 581 aa16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 FTOQ9C0B1 505 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 BECN2A8MW95 431 aa16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 ME1P48163 572 aa16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 SYCP1Q15431 976 aa16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 TXNRD1Q16881 649 aa16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 RC3H1Q5TC82 1133 aaKnown RBP16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 CACTINQ8WUQ7 758 aaKnown RBP16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 ANKRD7Q92527 254 aa16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 ARID3AQ99856 593 aa16.56■□□□□ 0.24
SMARCD3-205ENST00000469154 ZFYP08048 801 aaPredicted RBP16.55■□□□□ 0.24
SMARCD3-205ENST00000469154 CCDC144BQ3MJ40 725 aa16.55■□□□□ 0.24
SMARCD3-205ENST00000469154 SLC27A3Q5K4L6 730 aa16.55■□□□□ 0.24
SMARCD3-205ENST00000469154 CCDC144CPQ8IYA2 1237 aa16.55■□□□□ 0.24
SMARCD3-205ENST00000469154 CEP57L1Q8IYX8 460 aa16.55■□□□□ 0.24
SMARCD3-205ENST00000469154 MRPS27Q92552 414 aaKnown RBP16.55■□□□□ 0.24
SMARCD3-205ENST00000469154 RTEL1Q9NZ71 1219 aa16.55■□□□□ 0.24
SMARCD3-205ENST00000469154 FBXO3Q9UK99 471 aa16.55■□□□□ 0.24
SMARCD3-205ENST00000469154 A0A0G2JLW4 131 aa16.55■□□□□ 0.24
SMARCD3-205ENST00000469154 GIGYF2Q6Y7W6 1299 aaKnown RBP16.55■□□□□ 0.24
SMARCD3-205ENST00000469154 NAT10Q9H0A0 1025 aaKnown RBP16.55■□□□□ 0.24
SMARCD3-205ENST00000469154 CEP126Q9P2H0 1117 aa16.55■□□□□ 0.24
SMARCD3-205ENST00000469154 ABCC12Q96J65 1359 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 A0A1W2PQ27 194 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 A0A1W2PQ64 194 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 A0A1W2PQD8 194 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 PLSCR1O15162 318 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 TCIRG1Q13488 830 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 CCDC158Q5M9N0 1113 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 PDCL2Q8N4E4 241 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 ZNF594Q96JF6 807 aaPredicted RBP16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 C16orf45Q96MC5 204 aaPredicted RBP16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 AKAP2Q9Y2D5 859 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 PAXBP1Q9Y5B6 917 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 C4AP0C0L4 1744 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 C4BP0C0L5 1744 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 FAM177BA6PVY3 158 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 RPS6KA4O75676 772 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 TNNT1P13805 278 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 IMMTQ16891 758 aaKnown RBP16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 TTC39AQ5SRH9 613 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 AMIGO3Q86WK7 504 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 PKNOX2Q96KN3 472 aa16.54■□□□□ 0.24
SMARCD3-205ENST00000469154 RREB1Q92766 1687 aa16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 DHX16O60231 1041 aaKnown RBP16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 GUCY1B3Q02153 619 aa16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 TPD52L1Q16890 204 aaPredicted RBP16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 ADALQ6DHV7 355 aa16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 LRRC8AQ8IWT6 810 aa16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 DHX40Q8IX18 779 aaKnown RBP16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 OSBP2Q969R2 916 aa16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 AK7Q96M32 723 aa16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 RTCBQ9Y3I0 505 aaKnown RBP16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 ERVV-1B6SEH8 477 aa16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 FDPSP14324 419 aaKnown RBP16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 GPTP24298 496 aa16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 CHST3Q7LGC8 479 aa16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 PCDHA7Q9UN72 937 aa16.53■□□□□ 0.24
SMARCD3-205ENST00000469154 PPP4R3BQ5MIZ7 849 aa16.52■□□□□ 0.24
SMARCD3-205ENST00000469154 GORABQ5T7V8 394 aa16.52■□□□□ 0.24
SMARCD3-205ENST00000469154 TTLL5Q6EMB2 1281 aa16.52■□□□□ 0.24
SMARCD3-205ENST00000469154 FMR1NBQ8N0W7 255 aaPredicted RBP16.52■□□□□ 0.24
SMARCD3-205ENST00000469154 WDR19Q8NEZ3 1342 aa16.52■□□□□ 0.23
SMARCD3-205ENST00000469154 TAF1LQ8IZX4 1826 aa16.52■□□□□ 0.23
SMARCD3-205ENST00000469154 CAMTA2O94983 1202 aa16.51■□□□□ 0.23
SMARCD3-205ENST00000469154 YEATS4O95619 227 aa16.51■□□□□ 0.23
SMARCD3-205ENST00000469154 KCNG4Q8TDN1 519 aa16.51■□□□□ 0.23
SMARCD3-205ENST00000469154 C8orf76Q96K31 380 aa16.51■□□□□ 0.23
SMARCD3-205ENST00000469154 ISCA1Q9BUE6 129 aa16.51■□□□□ 0.23
SMARCD3-205ENST00000469154 PUS3Q9BZE2 481 aaKnown RBP16.51■□□□□ 0.23
SMARCD3-205ENST00000469154 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMARCD3-205ENST00000469154 STK38Q15208 465 aa16.51■□□□□ 0.23
SMARCD3-205ENST00000469154 WASHC4Q2M389 1173 aa16.51■□□□□ 0.23
SMARCD3-205ENST00000469154 CCDC57Q2TAC2 916 aa16.51■□□□□ 0.23
SMARCD3-205ENST00000469154 BRAPQ7Z569 592 aa16.51■□□□□ 0.23
SMARCD3-205ENST00000469154 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
SMARCD3-205ENST00000469154 RGS22Q8NE09 1264 aa16.51■□□□□ 0.23
SMARCD3-205ENST00000469154 PRC1O43663 620 aa16.5■□□□□ 0.23
SMARCD3-205ENST00000469154 LINC00301Q8NCQ3 95 aa16.5■□□□□ 0.23
SMARCD3-205ENST00000469154 POLR3EQ9NVU0 708 aa16.5■□□□□ 0.23
SMARCD3-205ENST00000469154 SF3A1Q15459 793 aaKnown RBP16.5■□□□□ 0.23
SMARCD3-205ENST00000469154 HSP90AB3PQ58FF7 597 aa16.5■□□□□ 0.23
SMARCD3-205ENST00000469154 AOPEPQ8N6M6 819 aa16.5■□□□□ 0.23
SMARCD3-205ENST00000469154 CCDC112Q8NEF3 446 aa16.5■□□□□ 0.23
SMARCD3-205ENST00000469154 APPBP2Q92624 585 aa16.5■□□□□ 0.23
SMARCD3-205ENST00000469154 XAGE2Q96GT9 111 aa16.5■□□□□ 0.23
SMARCD3-205ENST00000469154 KLF18A0A0U1RQI7 1052 aa16.49■□□□□ 0.23
SMARCD3-205ENST00000469154 GOLGA8BA8MQT2 603 aa16.49■□□□□ 0.23
SMARCD3-205ENST00000469154 GSDMDP57764 484 aa16.49■□□□□ 0.23
SMARCD3-205ENST00000469154 NCOA7Q8NI08 942 aa16.49■□□□□ 0.23
SMARCD3-205ENST00000469154 BPIFA3Q9BQP9 254 aa16.49■□□□□ 0.23
SMARCD3-205ENST00000469154 SDF4Q9BRK5 362 aa16.49■□□□□ 0.23
SMARCD3-205ENST00000469154 FOXP2O15409 715 aa16.49■□□□□ 0.23
SMARCD3-205ENST00000469154 ZRSR1Q15695 479 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms