RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 COA1Q9GZY4 146 aa15.36■□□□□ 0.05
VPS26A-204ENST00000467852 NBPF3Q9H094 633 aa15.36■□□□□ 0.05
VPS26A-204ENST00000467852 PAK6Q9NQU5 681 aaPredicted RBP15.36■□□□□ 0.05
VPS26A-204ENST00000467852 MED23Q9ULK4 1368 aa15.36■□□□□ 0.05
VPS26A-204ENST00000467852 CLRN2A0PK11 232 aa15.35■□□□□ 0.05
VPS26A-204ENST00000467852 SNAPC2Q13487 334 aa15.35■□□□□ 0.05
VPS26A-204ENST00000467852 VGLL4Q14135 290 aa15.35■□□□□ 0.05
VPS26A-204ENST00000467852 RASA3Q14644 834 aa15.35■□□□□ 0.05
VPS26A-204ENST00000467852 PROSER3Q2NL68 480 aa15.35■□□□□ 0.05
VPS26A-204ENST00000467852 RTL5Q5HYW3 569 aaPredicted RBP15.35■□□□□ 0.05
VPS26A-204ENST00000467852 XAGE3Q8WTP9 111 aa15.35■□□□□ 0.05
VPS26A-204ENST00000467852 HCN4Q9Y3Q4 1203 aa15.35■□□□□ 0.05
VPS26A-204ENST00000467852 COL2A1P02458 1487 aaPredicted RBP15.34■□□□□ 0.05
VPS26A-204ENST00000467852 HSP90B1P14625 803 aaKnown RBP15.34■□□□□ 0.05
VPS26A-204ENST00000467852 EIF4G2P78344 907 aaKnown RBP eCLIP15.34■□□□□ 0.05
VPS26A-204ENST00000467852 MDM2Q00987 491 aaPredicted RBP15.34■□□□□ 0.05
VPS26A-204ENST00000467852 PXYLP1Q8TE99 480 aa15.34■□□□□ 0.05
VPS26A-204ENST00000467852 SSUH2Q9Y2M2 353 aa15.34■□□□□ 0.05
VPS26A-204ENST00000467852 C1QTNF1Q9BXJ1 281 aa15.33■□□□□ 0.04
VPS26A-204ENST00000467852 C11orf49Q9H6J7 331 aa15.33■□□□□ 0.04
VPS26A-204ENST00000467852 GABRQQ9UN88 632 aa15.33■□□□□ 0.04
VPS26A-204ENST00000467852 SPDYE5A6NIY4 337 aa15.32■□□□□ 0.04
VPS26A-204ENST00000467852 ELNP15502 786 aa15.32■□□□□ 0.04
VPS26A-204ENST00000467852 GTF2IP78347 998 aa15.32■□□□□ 0.04
VPS26A-204ENST00000467852 TNFAIP1Q13829 316 aa15.32■□□□□ 0.04
VPS26A-204ENST00000467852 CCDC152Q4G0S7 254 aa15.32■□□□□ 0.04
VPS26A-204ENST00000467852 ANKRD18AQ8IVF6 992 aa15.32■□□□□ 0.04
VPS26A-204ENST00000467852 PIP4P2Q8N4L2 257 aa15.32■□□□□ 0.04
VPS26A-204ENST00000467852 CFAP100Q494V2 611 aa15.31■□□□□ 0.04
VPS26A-204ENST00000467852 CC2D1BQ5T0F9 858 aaKnown RBP15.31■□□□□ 0.04
VPS26A-204ENST00000467852 ERO1BQ86YB8 467 aa15.31■□□□□ 0.04
VPS26A-204ENST00000467852 NUDCQ9Y266 331 aa15.31■□□□□ 0.04
VPS26A-204ENST00000467852 ATP5J2-PTCD1G3V325 749 aa15.3■□□□□ 0.04
VPS26A-204ENST00000467852 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
VPS26A-204ENST00000467852 IRF6O14896 467 aa15.3■□□□□ 0.04
VPS26A-204ENST00000467852 FLT3LGP49771 235 aa15.3■□□□□ 0.04
VPS26A-204ENST00000467852 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.3■□□□□ 0.04
VPS26A-204ENST00000467852 PRMT6Q96LA8 375 aaPredicted RBP15.3■□□□□ 0.04
VPS26A-204ENST00000467852 LBHD1Q9BQE6 289 aaPredicted RBP15.3■□□□□ 0.04
VPS26A-204ENST00000467852 ISCA1Q9BUE6 129 aa15.3■□□□□ 0.04
VPS26A-204ENST00000467852 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.3■□□□□ 0.04
VPS26A-204ENST00000467852 PCDHAC2Q9Y5I4 1007 aa15.3■□□□□ 0.04
VPS26A-204ENST00000467852 BDP1A6H8Y1 2624 aa15.29■□□□□ 0.04
VPS26A-204ENST00000467852 PDHXO00330 501 aa15.29■□□□□ 0.04
VPS26A-204ENST00000467852 RBM5P52756 815 aaKnown RBP eCLIP15.29■□□□□ 0.04
VPS26A-204ENST00000467852 ANKRD23Q86SG2 305 aa15.29■□□□□ 0.04
VPS26A-204ENST00000467852 DDX60LQ5H9U9 1706 aaKnown RBP15.29■□□□□ 0.04
VPS26A-204ENST00000467852 U2AF1L5P0DN76 240 aaPredicted RBP15.28■□□□□ 0.04
VPS26A-204ENST00000467852 CCT4P50991 539 aaKnown RBP15.28■□□□□ 0.04
VPS26A-204ENST00000467852 U2AF1Q01081 240 aaKnown RBP eCLIP15.28■□□□□ 0.04
VPS26A-204ENST00000467852 IRF5Q13568 498 aa15.28■□□□□ 0.04
VPS26A-204ENST00000467852 CFAP53Q96M91 514 aa15.28■□□□□ 0.04
VPS26A-204ENST00000467852 F8W031 263 aaPredicted RBP15.27■□□□□ 0.04
VPS26A-204ENST00000467852 PPIL2Q13356 520 aa15.27■□□□□ 0.04
VPS26A-204ENST00000467852 ALYREFQ86V81 257 aaKnown RBP15.27■□□□□ 0.04
VPS26A-204ENST00000467852 PLBD2Q8NHP8 589 aa15.27■□□□□ 0.04
VPS26A-204ENST00000467852 ADAMTS19Q8TE59 1207 aa15.27■□□□□ 0.04
VPS26A-204ENST00000467852 ATXN2LQ8WWM7 1075 aaKnown RBP15.27■□□□□ 0.04
VPS26A-204ENST00000467852 TAOK2Q9UL54 1235 aa15.27■□□□□ 0.04
VPS26A-204ENST00000467852 CDH23Q9H251 3354 aa15.27■□□□□ 0.04
VPS26A-204ENST00000467852 TXNRD3Q86VQ6 643 aa15.26■□□□□ 0.03
VPS26A-204ENST00000467852 SP7Q8TDD2 431 aaPredicted RBP15.26■□□□□ 0.03
VPS26A-204ENST00000467852 CCDC85AQ96PX6 553 aaPredicted RBP15.26■□□□□ 0.03
VPS26A-204ENST00000467852 UHRF1Q96T88 793 aaPredicted RBP15.26■□□□□ 0.03
VPS26A-204ENST00000467852 DOCK3Q8IZD9 2030 aa15.26■□□□□ 0.03
VPS26A-204ENST00000467852 DLG5Q8TDM6 1919 aa15.25■□□□□ 0.03
VPS26A-204ENST00000467852 BCRP11274 1271 aa15.25■□□□□ 0.03
VPS26A-204ENST00000467852 ZBTB38Q8NAP3 1195 aaPredicted RBP15.25■□□□□ 0.03
VPS26A-204ENST00000467852 IL27Q8NEV9 243 aa15.25■□□□□ 0.03
VPS26A-204ENST00000467852 CDC5LQ99459 802 aaKnown RBP15.25■□□□□ 0.03
VPS26A-204ENST00000467852 PARK7Q99497 189 aaKnown RBP15.25■□□□□ 0.03
VPS26A-204ENST00000467852 TTYH1Q9H313 450 aaPredicted RBP15.25■□□□□ 0.03
VPS26A-204ENST00000467852 MINPP1Q9UNW1 487 aa15.25■□□□□ 0.03
VPS26A-204ENST00000467852 LEMD3Q9Y2U8 911 aa15.25■□□□□ 0.03
VPS26A-204ENST00000467852 SNCAIPQ9Y6H5 919 aa15.25■□□□□ 0.03
VPS26A-204ENST00000467852 CACNA1AO00555 2505 aa15.24■□□□□ 0.03
VPS26A-204ENST00000467852 TNPO2O14787 897 aaKnown RBP15.24■□□□□ 0.03
VPS26A-204ENST00000467852 PDE8AO60658 829 aa15.24■□□□□ 0.03
VPS26A-204ENST00000467852 NEFMP07197 916 aa15.24■□□□□ 0.03
VPS26A-204ENST00000467852 TNNI2P48788 182 aa15.24■□□□□ 0.03
VPS26A-204ENST00000467852 TRIM28Q13263 835 aaKnown RBP15.24■□□□□ 0.03
VPS26A-204ENST00000467852 TEPSINQ96N21 525 aa15.24■□□□□ 0.03
VPS26A-204ENST00000467852 BSDC1Q9NW68 430 aaPredicted RBP15.24■□□□□ 0.03
VPS26A-204ENST00000467852 TSPYL4Q9UJ04 414 aa15.24■□□□□ 0.03
VPS26A-204ENST00000467852 PPATQ06203 517 aa15.23■□□□□ 0.03
VPS26A-204ENST00000467852 CERS5Q8N5B7 392 aa15.23■□□□□ 0.03
VPS26A-204ENST00000467852 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.23■□□□□ 0.03
VPS26A-204ENST00000467852 USP38Q8NB14 1042 aa15.23■□□□□ 0.03
VPS26A-204ENST00000467852 ASB2Q96Q27 587 aa15.23■□□□□ 0.03
VPS26A-204ENST00000467852 HMX1Q9NP08 348 aaPredicted RBP15.23■□□□□ 0.03
VPS26A-204ENST00000467852 ZNF70Q9UC06 446 aaPredicted RBP15.23■□□□□ 0.03
VPS26A-204ENST00000467852 MUC6Q6W4X9 2439 aa15.23■□□□□ 0.03
VPS26A-204ENST00000467852 AOX1Q06278 1338 aa15.22■□□□□ 0.03
VPS26A-204ENST00000467852 FXR2P51116 673 aaKnown RBP eCLIP15.22■□□□□ 0.03
VPS26A-204ENST00000467852 SMAD3P84022 425 aaKnown RBP15.22■□□□□ 0.03
VPS26A-204ENST00000467852 CDAN1Q8IWY9 1227 aa15.22■□□□□ 0.03
VPS26A-204ENST00000467852 ZKSCAN4Q969J2 545 aaPredicted RBP15.22■□□□□ 0.03
VPS26A-204ENST00000467852 WRNIP1Q96S55 665 aa15.22■□□□□ 0.03
VPS26A-204ENST00000467852 PFASO15067 1338 aa15.21■□□□□ 0.03
VPS26A-204ENST00000467852 COA7Q96BR5 231 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms