RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 ATP6V0A2Q9Y487 856 aa22.33■■□□□ 1.17
CHRNA4-203ENST00000467563 ME3Q16798 604 aa22.32■■□□□ 1.16
CHRNA4-203ENST00000467563 TDRD7Q8NHU6 1098 aaKnown RBP22.32■■□□□ 1.16
CHRNA4-203ENST00000467563 TBC1D16Q8TBP0 767 aa22.32■■□□□ 1.16
CHRNA4-203ENST00000467563 HMGB1P09429 215 aaKnown RBP22.32■■□□□ 1.16
CHRNA4-203ENST00000467563 PKP1Q13835 747 aa22.32■■□□□ 1.16
CHRNA4-203ENST00000467563 ANKRD1Q15327 319 aa22.32■■□□□ 1.16
CHRNA4-203ENST00000467563 ZNF804AQ7Z570 1209 aa22.32■■□□□ 1.16
CHRNA4-203ENST00000467563 TNPO1Q92973 898 aaKnown RBP22.32■■□□□ 1.16
CHRNA4-203ENST00000467563 ZSCAN31Q96LW9 406 aaPredicted RBP22.32■■□□□ 1.16
CHRNA4-203ENST00000467563 EPB41L4AQ9HCS5 686 aaPredicted RBP22.32■■□□□ 1.16
CHRNA4-203ENST00000467563 LTBP1Q14766 1721 aa22.31■■□□□ 1.16
CHRNA4-203ENST00000467563 PATL2C9JE40 543 aaKnown RBP22.31■■□□□ 1.16
CHRNA4-203ENST00000467563 DHX32Q7L7V1 743 aaKnown RBP22.31■■□□□ 1.16
CHRNA4-203ENST00000467563 MASTLQ96GX5 879 aa22.31■■□□□ 1.16
CHRNA4-203ENST00000467563 NBPF3Q9H094 633 aa22.31■■□□□ 1.16
CHRNA4-203ENST00000467563 SH2B1Q9NRF2 756 aaPredicted RBP22.31■■□□□ 1.16
CHRNA4-203ENST00000467563 LAMA4Q16363 1823 aa22.31■■□□□ 1.16
CHRNA4-203ENST00000467563 ZNF213O14771 459 aa22.3■■□□□ 1.16
CHRNA4-203ENST00000467563 PRKAB2O43741 272 aa22.3■■□□□ 1.16
CHRNA4-203ENST00000467563 PRDX5P30044 214 aa22.3■■□□□ 1.16
CHRNA4-203ENST00000467563 OLFM4Q6UX06 510 aa22.3■■□□□ 1.16
CHRNA4-203ENST00000467563 NSUN4Q96CB9 384 aaKnown RBP22.3■■□□□ 1.16
CHRNA4-203ENST00000467563 GSG1L2A8MUP6 293 aa22.3■■□□□ 1.16
CHRNA4-203ENST00000467563 ALDH1B1P30837 517 aa22.3■■□□□ 1.16
CHRNA4-203ENST00000467563 EXOSC10Q01780 885 aaKnown RBP22.3■■□□□ 1.16
CHRNA4-203ENST00000467563 ST3GAL1Q11201 340 aa22.3■■□□□ 1.16
CHRNA4-203ENST00000467563 ALX1Q15699 326 aa22.3■■□□□ 1.16
CHRNA4-203ENST00000467563 NAA16Q6N069 864 aaPredicted RBP22.3■■□□□ 1.16
CHRNA4-203ENST00000467563 Q6ZUG5 572 aa22.3■■□□□ 1.16
CHRNA4-203ENST00000467563 LRRC2Q9BYS8 371 aa22.3■■□□□ 1.16
CHRNA4-203ENST00000467563 MECOMQ03112 1051 aa22.29■■□□□ 1.16
CHRNA4-203ENST00000467563 IFNL3Q8IZI9 196 aa22.29■■□□□ 1.16
CHRNA4-203ENST00000467563 NUCB2P80303 420 aa22.29■■□□□ 1.16
CHRNA4-203ENST00000467563 CCDC83Q8IWF9 413 aa22.29■■□□□ 1.16
CHRNA4-203ENST00000467563 RIOK1Q9BRS2 568 aaKnown RBP22.29■■□□□ 1.16
CHRNA4-203ENST00000467563 CD209Q9NNX6 404 aa22.29■■□□□ 1.16
CHRNA4-203ENST00000467563 SLC4A4Q9Y6R1 1079 aa22.29■■□□□ 1.16
CHRNA4-203ENST00000467563 ZMYM6O95789 1325 aa22.29■■□□□ 1.16
CHRNA4-203ENST00000467563 MAGEB6P1A0A0J9YX57 407 aa22.28■■□□□ 1.16
CHRNA4-203ENST00000467563 C6orf229H3BNL8 230 aa22.28■■□□□ 1.16
CHRNA4-203ENST00000467563 GNAT2P19087 354 aa22.28■■□□□ 1.16
CHRNA4-203ENST00000467563 C2CD5Q86YS7 1000 aa22.28■■□□□ 1.16
CHRNA4-203ENST00000467563 NECAB1Q8N987 351 aa22.28■■□□□ 1.16
CHRNA4-203ENST00000467563 TBC1D10CQ8IV04 446 aa22.27■■□□□ 1.16
CHRNA4-203ENST00000467563 ZNF622Q969S3 477 aaKnown RBP eCLIP22.27■■□□□ 1.16
CHRNA4-203ENST00000467563 SALL1Q9NSC2 1324 aa22.27■■□□□ 1.16
CHRNA4-203ENST00000467563 WDR66Q8TBY9 1149 aa22.27■■□□□ 1.16
CHRNA4-203ENST00000467563 NAPBQ9H115 298 aa22.27■■□□□ 1.16
CHRNA4-203ENST00000467563 ZDHHC9Q9Y397 364 aa22.27■■□□□ 1.16
CHRNA4-203ENST00000467563 IL1R1P14778 569 aa22.26■■□□□ 1.15
CHRNA4-203ENST00000467563 DYNLL1P63167 89 aaKnown RBP22.26■■□□□ 1.15
CHRNA4-203ENST00000467563 CHST3Q7LGC8 479 aa22.26■■□□□ 1.15
CHRNA4-203ENST00000467563 BRF1Q92994 677 aa22.26■■□□□ 1.15
CHRNA4-203ENST00000467563 AGXT2Q9BYV1 514 aa22.26■■□□□ 1.15
CHRNA4-203ENST00000467563 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.26■■□□□ 1.15
CHRNA4-203ENST00000467563 DUOX1Q9NRD9 1551 aa22.25■■□□□ 1.15
CHRNA4-203ENST00000467563 H0YIN7 160 aa22.25■■□□□ 1.15
CHRNA4-203ENST00000467563 MCM4P33991 863 aa22.25■■□□□ 1.15
CHRNA4-203ENST00000467563 MB21D2Q8IYB1 491 aaPredicted RBP22.25■■□□□ 1.15
CHRNA4-203ENST00000467563 DTNBO60941 627 aa22.24■■□□□ 1.15
CHRNA4-203ENST00000467563 CHRNA5P30532 468 aa22.24■■□□□ 1.15
CHRNA4-203ENST00000467563 GRIK5Q16478 980 aa22.24■■□□□ 1.15
CHRNA4-203ENST00000467563 SPTY2D1Q68D10 685 aaPredicted RBP22.24■■□□□ 1.15
CHRNA4-203ENST00000467563 MPNDQ8N594 471 aa22.24■■□□□ 1.15
CHRNA4-203ENST00000467563 SDR42E1Q8WUS8 393 aa22.24■■□□□ 1.15
CHRNA4-203ENST00000467563 FGD1P98174 961 aa22.24■■□□□ 1.15
CHRNA4-203ENST00000467563 STYK1Q6J9G0 422 aa22.24■■□□□ 1.15
CHRNA4-203ENST00000467563 NCOA7Q8NI08 942 aa22.24■■□□□ 1.15
CHRNA4-203ENST00000467563 NACAP1Q9BZK3 213 aa22.24■■□□□ 1.15
CHRNA4-203ENST00000467563 NKX2-3Q8TAU0 364 aa22.23■■□□□ 1.15
CHRNA4-203ENST00000467563 MAST2Q6P0Q8 1798 aa22.23■■□□□ 1.15
CHRNA4-203ENST00000467563 LDHBP07195 334 aaKnown RBP22.22■■□□□ 1.15
CHRNA4-203ENST00000467563 TDO2P48775 406 aa22.22■■□□□ 1.15
CHRNA4-203ENST00000467563 ANTXR2P58335 489 aa22.22■■□□□ 1.15
CHRNA4-203ENST00000467563 STK3Q13188 491 aa22.22■■□□□ 1.15
CHRNA4-203ENST00000467563 DPP8Q6V1X1 898 aaPredicted RBP22.22■■□□□ 1.15
CHRNA4-203ENST00000467563 DZIP1Q86YF9 867 aaKnown RBP22.22■■□□□ 1.15
CHRNA4-203ENST00000467563 SMC3Q9UQE7 1217 aa22.22■■□□□ 1.15
CHRNA4-203ENST00000467563 RIMBP2O15034 1052 aa22.22■■□□□ 1.15
CHRNA4-203ENST00000467563 RALYLQ86SE5 291 aaKnown RBP22.22■■□□□ 1.15
CHRNA4-203ENST00000467563 MCM5P33992 734 aa22.21■■□□□ 1.15
CHRNA4-203ENST00000467563 CTDSPL2Q05D32 466 aa22.21■■□□□ 1.15
CHRNA4-203ENST00000467563 TMED8Q6PL24 325 aaPredicted RBP22.21■■□□□ 1.15
CHRNA4-203ENST00000467563 FBXL16Q8N461 479 aa22.21■■□□□ 1.15
CHRNA4-203ENST00000467563 INCENPQ9NQS7 918 aa22.21■■□□□ 1.15
CHRNA4-203ENST00000467563 GPHNQ9NQX3 736 aaPredicted RBP22.21■■□□□ 1.15
CHRNA4-203ENST00000467563 AATFQ9NY61 560 aaKnown RBP eCLIP22.21■■□□□ 1.15
CHRNA4-203ENST00000467563 TACC3Q9Y6A5 838 aa22.21■■□□□ 1.15
CHRNA4-203ENST00000467563 PRC1O43663 620 aa22.21■■□□□ 1.15
CHRNA4-203ENST00000467563 BRD1O95696 1058 aa22.21■■□□□ 1.15
CHRNA4-203ENST00000467563 APOBRQ0VD83 1088 aa22.21■■□□□ 1.15
CHRNA4-203ENST00000467563 CLEC17AQ6ZS10 378 aa22.21■■□□□ 1.15
CHRNA4-203ENST00000467563 CCDC88AQ3V6T2 1871 aa22.2■■□□□ 1.14
CHRNA4-203ENST00000467563 NEDD4P46934 1319 aa22.2■■□□□ 1.14
CHRNA4-203ENST00000467563 TRDNQ13061 729 aa22.2■■□□□ 1.14
CHRNA4-203ENST00000467563 GTF3C6Q969F1 213 aa22.2■■□□□ 1.14
CHRNA4-203ENST00000467563 GJB2P29033 226 aa22.19■■□□□ 1.14
CHRNA4-203ENST00000467563 GBP4Q96PP9 640 aa22.19■■□□□ 1.14
CHRNA4-203ENST00000467563 TMX4Q9H1E5 349 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms