RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 GOLIM4O00461 696 aa9.96□□□□□ -0.82
UBE4B-205ENST00000465408 CPA1P15085 419 aa9.96□□□□□ -0.82
UBE4B-205ENST00000465408 DEKP35659 375 aaKnown RBP9.96□□□□□ -0.82
UBE4B-205ENST00000465408 KCNJ4P48050 445 aa9.96□□□□□ -0.82
UBE4B-205ENST00000465408 METTL24Q5JXM2 366 aa9.96□□□□□ -0.82
UBE4B-205ENST00000465408 DLK2Q6UY11 383 aa9.96□□□□□ -0.82
UBE4B-205ENST00000465408 CCDC129Q6ZRS4 1044 aa9.96□□□□□ -0.82
UBE4B-205ENST00000465408 ZNF589Q86UQ0 364 aaPredicted RBP9.96□□□□□ -0.82
UBE4B-205ENST00000465408 ZGPATQ8N5A5 531 aaKnown RBP9.96□□□□□ -0.82
UBE4B-205ENST00000465408 C7orf43Q8WVR3 580 aa9.96□□□□□ -0.82
UBE4B-205ENST00000465408 CCDC102AQ96A19 550 aa9.96□□□□□ -0.82
UBE4B-205ENST00000465408 UTP14AQ9BVJ6 771 aaKnown RBP9.96□□□□□ -0.82
UBE4B-205ENST00000465408 BCL2L12Q9HB09 334 aa9.96□□□□□ -0.82
UBE4B-205ENST00000465408 CNNM1Q9NRU3 951 aa9.96□□□□□ -0.82
UBE4B-205ENST00000465408 NIP7Q9Y221 180 aaKnown RBP eCLIP9.96□□□□□ -0.82
UBE4B-205ENST00000465408 RBM8AQ9Y5S9 174 aaKnown RBP9.96□□□□□ -0.82
UBE4B-205ENST00000465408 COL4A5P29400 1685 aa9.96□□□□□ -0.82
UBE4B-205ENST00000465408 IFIT1P09914 478 aaKnown RBP9.95□□□□□ -0.82
UBE4B-205ENST00000465408 MCM4P33991 863 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 PDE6BP35913 854 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 IARSP41252 1262 aaKnown RBP9.95□□□□□ -0.82
UBE4B-205ENST00000465408 ZNF157P51786 506 aaPredicted RBP9.95□□□□□ -0.82
UBE4B-205ENST00000465408 RAB3GAP1Q15042 981 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 ATP2B3Q16720 1220 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 SLFNL1Q499Z3 407 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 PARP10Q53GL7 1025 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 CCDC93Q567U6 631 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 TTC39AQ5SRH9 613 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 GORABQ5T7V8 394 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 OLFM4Q6UX06 510 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 LDHAL6AQ6ZMR3 332 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 TNPO1Q92973 898 aaKnown RBP9.95□□□□□ -0.82
UBE4B-205ENST00000465408 CNKSR1Q969H4 720 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 XAGE2Q96GT9 111 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 TMX3Q96JJ7 454 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 SEC62Q99442 399 aaKnown RBP9.95□□□□□ -0.82
UBE4B-205ENST00000465408 BRIP1Q9BX63 1249 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 SNRKQ9NRH2 765 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 PAG1Q9NWQ8 432 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 FBXO3Q9UK99 471 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 RIPOR2Q9Y4F9 1068 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 SH3TC1Q8TE82 1336 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 RFX7Q2KHR2 1363 aa9.95□□□□□ -0.82
UBE4B-205ENST00000465408 NTSR2O95665 410 aa9.94□□□□□ -0.82
UBE4B-205ENST00000465408 SLC10A3P09131 477 aa9.94□□□□□ -0.82
UBE4B-205ENST00000465408 MCM2P49736 904 aa9.94□□□□□ -0.82
UBE4B-205ENST00000465408 CREB3L3Q68CJ9 461 aa9.94□□□□□ -0.82
UBE4B-205ENST00000465408 Q7L0L9 218 aa9.94□□□□□ -0.82
UBE4B-205ENST00000465408 KBTBD3Q8NAB2 608 aa9.94□□□□□ -0.82
UBE4B-205ENST00000465408 JAKMIP1Q96N16 626 aaKnown RBP9.94□□□□□ -0.82
UBE4B-205ENST00000465408 AKAP2Q9Y2D5 859 aa9.94□□□□□ -0.82
UBE4B-205ENST00000465408 EYSQ5T1H1 3165 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 GPR25O00155 361 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 SLC27A2O14975 620 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 TAF5LO75529 589 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 CASTP20810 708 aaKnown RBP9.93□□□□□ -0.82
UBE4B-205ENST00000465408 SCARF1Q14162 830 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 ADCK5Q3MIX3 580 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 CCDC158Q5M9N0 1113 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 STYK1Q6J9G0 422 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 DEFB123Q8N688 67 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 HELBQ8NG08 1087 aaPredicted RBP9.93□□□□□ -0.82
UBE4B-205ENST00000465408 MAP4K1Q92918 833 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 KCNB2Q92953 911 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 TTC14Q96N46 770 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 LARP6Q9BRS8 491 aaKnown RBP9.93□□□□□ -0.82
UBE4B-205ENST00000465408 SEC31BQ9NQW1 1179 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 ZNF652Q9Y2D9 606 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 NUP98P52948 1817 aa9.93□□□□□ -0.82
UBE4B-205ENST00000465408 SRGNP10124 158 aa9.92□□□□□ -0.82
UBE4B-205ENST00000465408 AK2P54819 239 aa9.92□□□□□ -0.82
UBE4B-205ENST00000465408 EIF6P56537 245 aaKnown RBP9.92□□□□□ -0.82
UBE4B-205ENST00000465408 CUL4AQ13619 759 aa9.92□□□□□ -0.82
UBE4B-205ENST00000465408 NECTIN1Q15223 517 aa9.92□□□□□ -0.82
UBE4B-205ENST00000465408 VGLL2Q8N8G2 317 aa9.92□□□□□ -0.82
UBE4B-205ENST00000465408 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.92□□□□□ -0.82
UBE4B-205ENST00000465408 ADARB2Q9NS39 739 aaKnown RBP9.92□□□□□ -0.82
UBE4B-205ENST00000465408 PGAP2Q9UHJ9 254 aa9.92□□□□□ -0.82
UBE4B-205ENST00000465408 NARFQ9UHQ1 456 aa9.92□□□□□ -0.82
UBE4B-205ENST00000465408 TAF6LQ9Y6J9 622 aa9.92□□□□□ -0.82
UBE4B-205ENST00000465408 RNF113AO15541 343 aaKnown RBP9.91□□□□□ -0.82
UBE4B-205ENST00000465408 ZKSCAN1P17029 563 aaPredicted RBP9.91□□□□□ -0.82
UBE4B-205ENST00000465408 ZAP70P43403 619 aa9.91□□□□□ -0.82
UBE4B-205ENST00000465408 PKP1Q13835 747 aa9.91□□□□□ -0.82
UBE4B-205ENST00000465408 COL9A3Q14050 684 aaPredicted RBP9.91□□□□□ -0.82
UBE4B-205ENST00000465408 CCDC152Q4G0S7 254 aa9.91□□□□□ -0.82
UBE4B-205ENST00000465408 MCMDC2Q4G0Z9 681 aa9.91□□□□□ -0.82
UBE4B-205ENST00000465408 ZMYM1Q5SVZ6 1142 aa9.91□□□□□ -0.82
UBE4B-205ENST00000465408 TBC1D9BQ66K14 1250 aa9.91□□□□□ -0.82
UBE4B-205ENST00000465408 PRR5LQ6MZQ0 368 aa9.91□□□□□ -0.82
UBE4B-205ENST00000465408 PI16Q6UXB8 463 aa9.91□□□□□ -0.82
UBE4B-205ENST00000465408 C3orf67Q6ZVT6 689 aa9.91□□□□□ -0.82
UBE4B-205ENST00000465408 RUFY3Q7L099 469 aa9.91□□□□□ -0.82
UBE4B-205ENST00000465408 CDC37L1Q7L3B6 337 aa9.91□□□□□ -0.82
UBE4B-205ENST00000465408 GBA2Q9HCG7 927 aaPredicted RBP9.91□□□□□ -0.82
UBE4B-205ENST00000465408 CWC22Q9HCG8 908 aaKnown RBP9.91□□□□□ -0.82
UBE4B-205ENST00000465408 PDRG1Q9NUG6 133 aa9.91□□□□□ -0.82
UBE4B-205ENST00000465408 RPAP1Q9BWH6 1393 aaPredicted RBP9.9□□□□□ -0.82
UBE4B-205ENST00000465408 LAMA2P24043 3122 aaKnown RBP9.9□□□□□ -0.82
UBE4B-205ENST00000465408 MAST3O60307 1309 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms