RNA–Protein interactions for RNA: ENST00000462392.5

IMP4-210, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 1,793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-210ENST00000462392 LTBP1Q14766 1721 aa24.4■■□□□ 1.5
IMP4-210ENST00000462392 HAND2P61296 217 aa24.39■■□□□ 1.5
IMP4-210ENST00000462392 NAA16Q6N069 864 aaPredicted RBP24.39■■□□□ 1.5
IMP4-210ENST00000462392 OLFM4Q6UX06 510 aa24.39■■□□□ 1.5
IMP4-210ENST00000462392 ZNF384Q8TF68 577 aa24.39■■□□□ 1.5
IMP4-210ENST00000462392 ALDH8A1Q9H2A2 487 aaPredicted RBP24.39■■□□□ 1.5
IMP4-210ENST00000462392 CACNA1SQ13698 1873 aa24.39■■□□□ 1.49
IMP4-210ENST00000462392 PATL2C9JE40 543 aaKnown RBP24.39■■□□□ 1.49
IMP4-210ENST00000462392 CWC22Q9HCG8 908 aaKnown RBP24.39■■□□□ 1.49
IMP4-210ENST00000462392 CD209Q9NNX6 404 aa24.39■■□□□ 1.49
IMP4-210ENST00000462392 HMGB1P09429 215 aaKnown RBP24.38■■□□□ 1.49
IMP4-210ENST00000462392 PRDX5P30044 214 aa24.38■■□□□ 1.49
IMP4-210ENST00000462392 STYK1Q6J9G0 422 aa24.38■■□□□ 1.49
IMP4-210ENST00000462392 WDR66Q8TBY9 1149 aa24.38■■□□□ 1.49
IMP4-210ENST00000462392 NSUN4Q96CB9 384 aaKnown RBP24.38■■□□□ 1.49
IMP4-210ENST00000462392 INTS4Q96HW7 963 aaKnown RBP24.38■■□□□ 1.49
IMP4-210ENST00000462392 ZNF213O14771 459 aa24.37■■□□□ 1.49
IMP4-210ENST00000462392 GNAT2P19087 354 aa24.37■■□□□ 1.49
IMP4-210ENST00000462392 MECOMQ03112 1051 aa24.37■■□□□ 1.49
IMP4-210ENST00000462392 ANKRD1Q15327 319 aa24.37■■□□□ 1.49
IMP4-210ENST00000462392 NFKBIBQ15653 356 aa24.37■■□□□ 1.49
IMP4-210ENST00000462392 MPNDQ8N594 471 aa24.37■■□□□ 1.49
IMP4-210ENST00000462392 MAGEB6P1A0A0J9YX57 407 aa24.37■■□□□ 1.49
IMP4-210ENST00000462392 IL1R1P14778 569 aa24.37■■□□□ 1.49
IMP4-210ENST00000462392 CHRNA5P30532 468 aa24.37■■□□□ 1.49
IMP4-210ENST00000462392 ALX1Q15699 326 aa24.37■■□□□ 1.49
IMP4-210ENST00000462392 EPB41L4AQ9HCS5 686 aaPredicted RBP24.37■■□□□ 1.49
IMP4-210ENST00000462392 SLC4A4Q9Y6R1 1079 aa24.37■■□□□ 1.49
IMP4-210ENST00000462392 SALL1Q9NSC2 1324 aa24.36■■□□□ 1.49
IMP4-210ENST00000462392 GSG1L2A8MUP6 293 aa24.36■■□□□ 1.49
IMP4-210ENST00000462392 PRKAB2O43741 272 aa24.36■■□□□ 1.49
IMP4-210ENST00000462392 LARGE1O95461 756 aa24.36■■□□□ 1.49
IMP4-210ENST00000462392 TOB2Q14106 344 aaPredicted RBP24.36■■□□□ 1.49
IMP4-210ENST00000462392 SPTY2D1Q68D10 685 aaPredicted RBP24.36■■□□□ 1.49
IMP4-210ENST00000462392 IFNL3Q8IZI9 196 aa24.36■■□□□ 1.49
IMP4-210ENST00000462392 SLC16A10Q8TF71 515 aa24.36■■□□□ 1.49
IMP4-210ENST00000462392 ZSCAN31Q96LW9 406 aaPredicted RBP24.36■■□□□ 1.49
IMP4-210ENST00000462392 TMX4Q9H1E5 349 aaPredicted RBP24.36■■□□□ 1.49
IMP4-210ENST00000462392 ZMYM6O95789 1325 aa24.35■■□□□ 1.49
IMP4-210ENST00000462392 DHX32Q7L7V1 743 aaKnown RBP24.35■■□□□ 1.49
IMP4-210ENST00000462392 RIOK1Q9BRS2 568 aaKnown RBP24.35■■□□□ 1.49
IMP4-210ENST00000462392 TPCN1Q9ULQ1 816 aa24.35■■□□□ 1.49
IMP4-210ENST00000462392 DPP8Q6V1X1 898 aaPredicted RBP24.34■■□□□ 1.49
IMP4-210ENST00000462392 SH2B1Q9NRF2 756 aaPredicted RBP24.34■■□□□ 1.49
IMP4-210ENST00000462392 Q6ZUG5 572 aa24.34■■□□□ 1.49
IMP4-210ENST00000462392 NAPBQ9H115 298 aa24.34■■□□□ 1.49
IMP4-210ENST00000462392 DUOX1Q9NRD9 1551 aa24.34■■□□□ 1.49
IMP4-210ENST00000462392 RIMBP2O15034 1052 aa24.33■■□□□ 1.49
IMP4-210ENST00000462392 EXOSC10Q01780 885 aaKnown RBP24.33■■□□□ 1.49
IMP4-210ENST00000462392 RAB3GAP1Q15042 981 aa24.33■■□□□ 1.49
IMP4-210ENST00000462392 ME3Q16798 604 aa24.33■■□□□ 1.49
IMP4-210ENST00000462392 NACAP1Q9BZK3 213 aa24.33■■□□□ 1.49
IMP4-210ENST00000462392 NBPF3Q9H094 633 aa24.33■■□□□ 1.49
IMP4-210ENST00000462392 LDHBP07195 334 aaKnown RBP24.32■■□□□ 1.48
IMP4-210ENST00000462392 DYNLL1P63167 89 aaKnown RBP24.32■■□□□ 1.48
IMP4-210ENST00000462392 TMED8Q6PL24 325 aaPredicted RBP24.32■■□□□ 1.48
IMP4-210ENST00000462392 DZIP1Q86YF9 867 aaKnown RBP24.32■■□□□ 1.48
IMP4-210ENST00000462392 CNKSR1Q969H4 720 aa24.32■■□□□ 1.48
IMP4-210ENST00000462392 LRRC2Q9BYS8 371 aa24.32■■□□□ 1.48
IMP4-210ENST00000462392 LAMA4Q16363 1823 aa24.32■■□□□ 1.48
IMP4-210ENST00000462392 ILDR1Q86SU0 546 aaPredicted RBP24.31■■□□□ 1.48
IMP4-210ENST00000462392 ZC3H12CQ9C0D7 883 aaKnown RBP24.31■■□□□ 1.48
IMP4-210ENST00000462392 IGSF3O75054 1194 aa24.31■■□□□ 1.48
IMP4-210ENST00000462392 TDO2P48775 406 aa24.31■■□□□ 1.48
IMP4-210ENST00000462392 TBC1D10CQ8IV04 446 aa24.31■■□□□ 1.48
IMP4-210ENST00000462392 MAST2Q6P0Q8 1798 aa24.31■■□□□ 1.48
IMP4-210ENST00000462392 C10orf71Q711Q0 1435 aa24.31■■□□□ 1.48
IMP4-210ENST00000462392 FGD1P98174 961 aa24.3■■□□□ 1.48
IMP4-210ENST00000462392 GRIK5Q16478 980 aa24.3■■□□□ 1.48
IMP4-210ENST00000462392 CCDC83Q8IWF9 413 aa24.3■■□□□ 1.48
IMP4-210ENST00000462392 NCOA7Q8NI08 942 aa24.3■■□□□ 1.48
IMP4-210ENST00000462392 SDR42E1Q8WUS8 393 aa24.3■■□□□ 1.48
IMP4-210ENST00000462392 COA1Q9GZY4 146 aa24.3■■□□□ 1.48
IMP4-210ENST00000462392 NUCB2P80303 420 aa24.29■■□□□ 1.48
IMP4-210ENST00000462392 ST3GAL1Q11201 340 aa24.29■■□□□ 1.48
IMP4-210ENST00000462392 CHST3Q7LGC8 479 aa24.29■■□□□ 1.48
IMP4-210ENST00000462392 RALYLQ86SE5 291 aaKnown RBP24.29■■□□□ 1.48
IMP4-210ENST00000462392 MB21D2Q8IYB1 491 aaPredicted RBP24.29■■□□□ 1.48
IMP4-210ENST00000462392 NECAB1Q8N987 351 aa24.29■■□□□ 1.48
IMP4-210ENST00000462392 TNPO1Q92973 898 aaKnown RBP24.29■■□□□ 1.48
IMP4-210ENST00000462392 BRF1Q92994 677 aa24.29■■□□□ 1.48
IMP4-210ENST00000462392 AATFQ9NY61 560 aaKnown RBP eCLIP24.29■■□□□ 1.48
IMP4-210ENST00000462392 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.29■■□□□ 1.48
IMP4-210ENST00000462392 SLX4Q8IY92 1834 aa24.28■■□□□ 1.48
IMP4-210ENST00000462392 CCDC88AQ3V6T2 1871 aa24.28■■□□□ 1.48
IMP4-210ENST00000462392 PKP1Q13835 747 aa24.28■■□□□ 1.48
IMP4-210ENST00000462392 AGXT2Q9BYV1 514 aa24.28■■□□□ 1.48
IMP4-210ENST00000462392 ZNF219Q9P2Y4 722 aaPredicted RBP24.28■■□□□ 1.48
IMP4-210ENST00000462392 TRDNQ13061 729 aa24.27■■□□□ 1.48
IMP4-210ENST00000462392 MCM5P33992 734 aa24.26■■□□□ 1.47
IMP4-210ENST00000462392 EYA3Q99504 573 aa24.26■■□□□ 1.47
IMP4-210ENST00000462392 FAM205AQ6ZU69 1335 aa24.26■■□□□ 1.47
IMP4-210ENST00000462392 GSTO1P78417 241 aa24.26■■□□□ 1.47
IMP4-210ENST00000462392 CTDSPL2Q05D32 466 aa24.26■■□□□ 1.47
IMP4-210ENST00000462392 MFSD14BQ5SR56 506 aa24.26■■□□□ 1.47
IMP4-210ENST00000462392 TBC1D22AQ8WUA7 517 aa24.26■■□□□ 1.47
IMP4-210ENST00000462392 C7orf43Q8WVR3 580 aa24.26■■□□□ 1.47
IMP4-210ENST00000462392 ZBTB7AO95365 584 aa24.25■■□□□ 1.47
IMP4-210ENST00000462392 GTF2IP78347 998 aa24.25■■□□□ 1.47
IMP4-210ENST00000462392 DIXDC1Q155Q3 683 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms