RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 PCDHB5Q9Y5E4 795 aa11.55□□□□□ -0.56
COL4A2-203ENST00000462309 WFS1O76024 890 aa11.54□□□□□ -0.56
COL4A2-203ENST00000462309 ARNTP27540 789 aa11.54□□□□□ -0.56
COL4A2-203ENST00000462309 GRIK5Q16478 980 aa11.54□□□□□ -0.56
COL4A2-203ENST00000462309 SOGA3Q5TF21 947 aa11.54□□□□□ -0.56
COL4A2-203ENST00000462309 C20orf204Q6ZNR8 217 aa11.54□□□□□ -0.56
COL4A2-203ENST00000462309 SLITRK4Q8IW52 837 aa11.54□□□□□ -0.56
COL4A2-203ENST00000462309 GOLGA6L1Q8N7Z2 621 aa11.54□□□□□ -0.56
COL4A2-203ENST00000462309 SOX1O00570 391 aaPredicted RBP11.53□□□□□ -0.56
COL4A2-203ENST00000462309 RGS9O75916 674 aaPredicted RBP11.53□□□□□ -0.56
COL4A2-203ENST00000462309 STK10O94804 968 aaKnown RBP11.53□□□□□ -0.56
COL4A2-203ENST00000462309 EPHA1P21709 976 aa11.53□□□□□ -0.56
COL4A2-203ENST00000462309 ALAS2P22557 587 aa11.53□□□□□ -0.56
COL4A2-203ENST00000462309 CRKP46108 304 aa11.53□□□□□ -0.56
COL4A2-203ENST00000462309 RNFT1Q5M7Z0 435 aa11.53□□□□□ -0.56
COL4A2-203ENST00000462309 SLCO4C1Q6ZQN7 724 aa11.53□□□□□ -0.56
COL4A2-203ENST00000462309 LRRC3Q9BY71 257 aa11.53□□□□□ -0.56
COL4A2-203ENST00000462309 GDF2Q9UK05 429 aaPredicted RBP11.53□□□□□ -0.56
COL4A2-203ENST00000462309 FAM221AA4D161 298 aa11.52□□□□□ -0.57
COL4A2-203ENST00000462309 F13A1P00488 732 aa11.52□□□□□ -0.57
COL4A2-203ENST00000462309 IKBKEQ14164 716 aa11.52□□□□□ -0.57
COL4A2-203ENST00000462309 LRRC14Q15048 493 aa11.52□□□□□ -0.57
COL4A2-203ENST00000462309 BNC2Q6ZN30 1099 aaPredicted RBP11.52□□□□□ -0.57
COL4A2-203ENST00000462309 SULF2Q8IWU5 870 aa11.52□□□□□ -0.57
COL4A2-203ENST00000462309 GATAD2BQ8WXI9 593 aa11.52□□□□□ -0.57
COL4A2-203ENST00000462309 COL25A1Q9BXS0 654 aaPredicted RBP11.52□□□□□ -0.57
COL4A2-203ENST00000462309 ZNF252P-AS1Q0IIN9 211 aa11.51□□□□□ -0.57
COL4A2-203ENST00000462309 APOBRQ0VD83 1088 aa11.51□□□□□ -0.57
COL4A2-203ENST00000462309 GDF6Q6KF10 455 aaPredicted RBP11.51□□□□□ -0.57
COL4A2-203ENST00000462309 GRIN3AQ8TCU5 1115 aa11.51□□□□□ -0.57
COL4A2-203ENST00000462309 NUDT8Q8WV74 236 aa11.51□□□□□ -0.57
COL4A2-203ENST00000462309 NKD1Q969G9 470 aa11.51□□□□□ -0.57
COL4A2-203ENST00000462309 EMILIN2Q9BXX0 1053 aa11.51□□□□□ -0.57
COL4A2-203ENST00000462309 MIR1-1HGQ9H1L0 117 aa11.51□□□□□ -0.57
COL4A2-203ENST00000462309 STRIP2Q9ULQ0 834 aa11.51□□□□□ -0.57
COL4A2-203ENST00000462309 FAM177BA6PVY3 158 aa11.5□□□□□ -0.57
COL4A2-203ENST00000462309 H3BRJ5 948 aa11.5□□□□□ -0.57
COL4A2-203ENST00000462309 EPXP11678 715 aa11.5□□□□□ -0.57
COL4A2-203ENST00000462309 BAG6P46379 1132 aa11.5□□□□□ -0.57
COL4A2-203ENST00000462309 CABP4P57796 275 aa11.5□□□□□ -0.57
COL4A2-203ENST00000462309 SCARA3Q6AZY7 606 aa11.5□□□□□ -0.57
COL4A2-203ENST00000462309 PDZD3Q86UT5 571 aa11.5□□□□□ -0.57
COL4A2-203ENST00000462309 SOX17Q9H6I2 414 aaPredicted RBP11.5□□□□□ -0.57
COL4A2-203ENST00000462309 CILPO75339 1184 aa11.49□□□□□ -0.57
COL4A2-203ENST00000462309 SSBP05455 408 aaKnown RBP eCLIP11.49□□□□□ -0.57
COL4A2-203ENST00000462309 SRSF11Q05519 484 aaKnown RBP11.49□□□□□ -0.57
COL4A2-203ENST00000462309 CCDC144BQ3MJ40 725 aa11.49□□□□□ -0.57
COL4A2-203ENST00000462309 LLGL2Q6P1M3 1020 aa11.49□□□□□ -0.57
COL4A2-203ENST00000462309 FBXO27Q8NI29 283 aa11.49□□□□□ -0.57
COL4A2-203ENST00000462309 DDX54Q8TDD1 881 aaKnown RBP11.49□□□□□ -0.57
COL4A2-203ENST00000462309 LMNB1P20700 586 aa11.48□□□□□ -0.57
COL4A2-203ENST00000462309 NFX1Q12986 1120 aaKnown RBP11.48□□□□□ -0.57
COL4A2-203ENST00000462309 MPP2Q14168 576 aa11.48□□□□□ -0.57
COL4A2-203ENST00000462309 IL22RA1Q8N6P7 574 aa11.48□□□□□ -0.57
COL4A2-203ENST00000462309 PMFBP1Q8TBY8 1022 aa11.48□□□□□ -0.57
COL4A2-203ENST00000462309 JARID2Q92833 1246 aaPredicted RBP11.48□□□□□ -0.57
COL4A2-203ENST00000462309 ZNF408Q9H9D4 720 aa11.48□□□□□ -0.57
COL4A2-203ENST00000462309 CACNA2D2Q9NY47 1150 aa11.48□□□□□ -0.57
COL4A2-203ENST00000462309 AP3B2Q13367 1082 aa11.47□□□□□ -0.57
COL4A2-203ENST00000462309 SEPT6Q14141 434 aa11.47□□□□□ -0.57
COL4A2-203ENST00000462309 SEZ6Q53EL9 994 aa11.47□□□□□ -0.57
COL4A2-203ENST00000462309 HGSNATQ68CP4 663 aa11.47□□□□□ -0.57
COL4A2-203ENST00000462309 C1orf229Q6ZS94 237 aaPredicted RBP11.47□□□□□ -0.57
COL4A2-203ENST00000462309 NOP9Q86U38 636 aaKnown RBP11.47□□□□□ -0.57
COL4A2-203ENST00000462309 FAM177A1Q8N128 213 aaPredicted RBP11.47□□□□□ -0.57
COL4A2-203ENST00000462309 GAL3ST3Q96A11 431 aa11.47□□□□□ -0.57
COL4A2-203ENST00000462309 ACDQ96AP0 544 aa11.47□□□□□ -0.57
COL4A2-203ENST00000462309 PPME1Q9Y570 386 aa11.47□□□□□ -0.57
COL4A2-203ENST00000462309 CADPSQ9ULU8 1353 aa11.46□□□□□ -0.57
COL4A2-203ENST00000462309 ALBP02768 609 aa11.46□□□□□ -0.57
COL4A2-203ENST00000462309 ETFBP38117 255 aa11.46□□□□□ -0.57
COL4A2-203ENST00000462309 AFF1P51825 1210 aaKnown RBP11.46□□□□□ -0.57
COL4A2-203ENST00000462309 KRT76Q01546 638 aa11.46□□□□□ -0.57
COL4A2-203ENST00000462309 KANK3Q6NY19 840 aa11.46□□□□□ -0.57
COL4A2-203ENST00000462309 GIMAP6Q6P9H5 292 aa11.46□□□□□ -0.57
COL4A2-203ENST00000462309 WNT8BQ93098 351 aa11.46□□□□□ -0.57
COL4A2-203ENST00000462309 CBX8Q9HC52 389 aa11.46□□□□□ -0.57
COL4A2-203ENST00000462309 JPH1Q9HDC5 661 aaPredicted RBP11.46□□□□□ -0.57
COL4A2-203ENST00000462309 ERBB4Q15303 1308 aa11.45□□□□□ -0.58
COL4A2-203ENST00000462309 TERTO14746 1132 aaKnown RBP11.45□□□□□ -0.58
COL4A2-203ENST00000462309 TLR3O15455 904 aaKnown RBP11.45□□□□□ -0.58
COL4A2-203ENST00000462309 WIPF1O43516 503 aa11.45□□□□□ -0.58
COL4A2-203ENST00000462309 PIP4K2BP78356 416 aa11.45□□□□□ -0.58
COL4A2-203ENST00000462309 PTPN11Q06124 597 aaPredicted RBP11.45□□□□□ -0.58
COL4A2-203ENST00000462309 NBPF6Q5VWK0 638 aa11.45□□□□□ -0.58
COL4A2-203ENST00000462309 NBPF4Q96M43 638 aa11.45□□□□□ -0.58
COL4A2-203ENST00000462309 SMARCA5O60264 1052 aaPredicted RBP11.44□□□□□ -0.58
COL4A2-203ENST00000462309 EIF4EBP3O60516 100 aaPredicted RBP11.44□□□□□ -0.58
COL4A2-203ENST00000462309 TRIM37O94972 964 aa11.44□□□□□ -0.58
COL4A2-203ENST00000462309 GSTP1P09211 210 aaKnown RBP11.44□□□□□ -0.58
COL4A2-203ENST00000462309 ILDR2Q71H61 639 aa11.44□□□□□ -0.58
COL4A2-203ENST00000462309 CKAP2LQ8IYA6 745 aa11.44□□□□□ -0.58
COL4A2-203ENST00000462309 SRRTQ9BXP5 876 aaKnown RBP11.44□□□□□ -0.58
COL4A2-203ENST00000462309 OSGEPQ9NPF4 335 aa11.44□□□□□ -0.58
COL4A2-203ENST00000462309 LINC01387J3KSC0 135 aa11.43□□□□□ -0.58
COL4A2-203ENST00000462309 GSTM4Q03013 218 aa11.43□□□□□ -0.58
COL4A2-203ENST00000462309 C19orf57Q0VDD7 668 aa11.43□□□□□ -0.58
COL4A2-203ENST00000462309 CWF19L2Q2TBE0 894 aaKnown RBP11.43□□□□□ -0.58
COL4A2-203ENST00000462309 MPRIPQ6WCQ1 1025 aa11.43□□□□□ -0.58
COL4A2-203ENST00000462309 REC114Q7Z4M0 266 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms