RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SEMA3FQ13275 785 aa7.67□□□□□ -1.18
VPS36-202ENST00000462289 EFHC2Q5JST6 749 aa7.67□□□□□ -1.18
VPS36-202ENST00000462289 PTF1AQ7RTS3 328 aa7.67□□□□□ -1.18
VPS36-202ENST00000462289 PGBD3Q8N328 593 aa7.67□□□□□ -1.18
VPS36-202ENST00000462289 NEDD1Q8NHV4 660 aa7.67□□□□□ -1.18
VPS36-202ENST00000462289 KLRG1Q96E93 195 aa7.67□□□□□ -1.18
VPS36-202ENST00000462289 SLC4A9Q96Q91 983 aa7.67□□□□□ -1.18
VPS36-202ENST00000462289 CAMKK2Q96RR4 588 aa7.67□□□□□ -1.18
VPS36-202ENST00000462289 SPG7Q9UQ90 795 aa7.67□□□□□ -1.18
VPS36-202ENST00000462289 COG6Q9Y2V7 657 aa7.67□□□□□ -1.18
VPS36-202ENST00000462289 TJP1Q07157 1748 aa7.66□□□□□ -1.18
VPS36-202ENST00000462289 CASZ1Q86V15 1759 aa7.66□□□□□ -1.18
VPS36-202ENST00000462289 UBR3Q6ZT12 1888 aa7.66□□□□□ -1.18
VPS36-202ENST00000462289 MYH14Q7Z406 1995 aaKnown RBP7.66□□□□□ -1.18
VPS36-202ENST00000462289 SMTNP53814 917 aa7.66□□□□□ -1.18
VPS36-202ENST00000462289 MTFR1Q15390 333 aa7.66□□□□□ -1.18
VPS36-202ENST00000462289 CCDC184Q52MB2 194 aa7.66□□□□□ -1.18
VPS36-202ENST00000462289 PLEKHO1Q53GL0 409 aaPredicted RBP7.66□□□□□ -1.18
VPS36-202ENST00000462289 FAM182BQ5T319 152 aa7.66□□□□□ -1.18
VPS36-202ENST00000462289 PODNQ7Z5L7 613 aa7.66□□□□□ -1.18
VPS36-202ENST00000462289 IFNL2Q8IZJ0 200 aa7.66□□□□□ -1.18
VPS36-202ENST00000462289 C1orf216Q8TAB5 229 aa7.66□□□□□ -1.18
VPS36-202ENST00000462289 DCAF5Q96JK2 942 aa7.66□□□□□ -1.18
VPS36-202ENST00000462289 PHACTR3Q96KR7 559 aa7.66□□□□□ -1.18
VPS36-202ENST00000462289 DNAAF2Q9NVR5 837 aaKnown RBP7.66□□□□□ -1.18
VPS36-202ENST00000462289 KCPQ6ZWJ8 1503 aa7.66□□□□□ -1.18
VPS36-202ENST00000462289 TMEM229AB2RXF0 380 aa7.65□□□□□ -1.18
VPS36-202ENST00000462289 ERVV-2B6SEH9 535 aa7.65□□□□□ -1.18
VPS36-202ENST00000462289 KCNQ2O43526 872 aa7.65□□□□□ -1.18
VPS36-202ENST00000462289 BNIP3LO60238 219 aa7.65□□□□□ -1.18
VPS36-202ENST00000462289 ATP4AP20648 1035 aa7.65□□□□□ -1.18
VPS36-202ENST00000462289 MTHFSDQ2M296 383 aaKnown RBP7.65□□□□□ -1.18
VPS36-202ENST00000462289 AKAP4Q5JQC9 854 aa7.65□□□□□ -1.18
VPS36-202ENST00000462289 GPAT2Q6NUI2 795 aa7.65□□□□□ -1.18
VPS36-202ENST00000462289 C1orf229Q6ZS94 237 aaPredicted RBP7.65□□□□□ -1.18
VPS36-202ENST00000462289 TBC1D9Q6ZT07 1266 aa7.65□□□□□ -1.18
VPS36-202ENST00000462289 PNISRQ8TF01 805 aaKnown RBP7.65□□□□□ -1.18
VPS36-202ENST00000462289 GDF2Q9UK05 429 aaPredicted RBP7.65□□□□□ -1.18
VPS36-202ENST00000462289 NUDCQ9Y266 331 aa7.65□□□□□ -1.18
VPS36-202ENST00000462289 MAP3K5Q99683 1374 aa7.64□□□□□ -1.19
VPS36-202ENST00000462289 SHISA8B8ZZ34 492 aa7.64□□□□□ -1.19
VPS36-202ENST00000462289 C2CD2LO14523 706 aa7.64□□□□□ -1.19
VPS36-202ENST00000462289 HTATSF1O43719 755 aaKnown RBP7.64□□□□□ -1.19
VPS36-202ENST00000462289 TRIM37O94972 964 aa7.64□□□□□ -1.19
VPS36-202ENST00000462289 HSP90AB1P08238 724 aaKnown RBP7.64□□□□□ -1.19
VPS36-202ENST00000462289 HMOX1P09601 288 aa7.64□□□□□ -1.19
VPS36-202ENST00000462289 PRKAR2BP31323 418 aa7.64□□□□□ -1.19
VPS36-202ENST00000462289 PLA2G4AP47712 749 aa7.64□□□□□ -1.19
VPS36-202ENST00000462289 GOLGA6L1Q8N7Z2 621 aa7.64□□□□□ -1.19
VPS36-202ENST00000462289 ABHD17AQ96GS6 310 aa7.64□□□□□ -1.19
VPS36-202ENST00000462289 NIFKQ9BYG3 293 aaKnown RBP7.64□□□□□ -1.19
VPS36-202ENST00000462289 ALG2Q9H553 416 aa7.64□□□□□ -1.19
VPS36-202ENST00000462289 IQSEC3Q9UPP2 1182 aaPredicted RBP7.64□□□□□ -1.19
VPS36-202ENST00000462289 PCDHGA11Q9Y5H2 935 aa7.64□□□□□ -1.19
VPS36-202ENST00000462289 HEG1Q9ULI3 1381 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 SRCAPQ6ZRS2 3230 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 PIK3CDO00329 1044 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 LZTS3O60299 673 aaPredicted RBP7.63□□□□□ -1.19
VPS36-202ENST00000462289 ITGB2P05107 769 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 U2AF1L5P0DN76 240 aaPredicted RBP7.63□□□□□ -1.19
VPS36-202ENST00000462289 FGFR3P22607 806 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 U2AF1Q01081 240 aaKnown RBP eCLIP7.63□□□□□ -1.19
VPS36-202ENST00000462289 PLA2G4EQ3MJ16 856 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 ZNF530Q6P9A1 599 aaPredicted RBP7.63□□□□□ -1.19
VPS36-202ENST00000462289 FIGNL1Q6PIW4 674 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 NLRP8Q86W28 1048 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 NFATC2IPQ8NCF5 419 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 GALNT6Q8NCL4 622 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 IL17REQ8NFR9 667 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 GAS2L2Q8NHY3 880 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 DDX54Q8TDD1 881 aaKnown RBP7.63□□□□□ -1.19
VPS36-202ENST00000462289 PIGBQ92521 554 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 LAMB4A4D0S4 1761 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 C4BP0C0L5 1744 aa7.63□□□□□ -1.19
VPS36-202ENST00000462289 CCER2I3L3R5 266 aa7.62□□□□□ -1.19
VPS36-202ENST00000462289 CDK2AP1O14519 115 aa7.62□□□□□ -1.19
VPS36-202ENST00000462289 U2SURPO15042 1029 aaKnown RBP7.62□□□□□ -1.19
VPS36-202ENST00000462289 RNMTO43148 476 aaKnown RBP7.62□□□□□ -1.19
VPS36-202ENST00000462289 LRP5O75197 1615 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 A6NJY4 79 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 GNAT3A8MTJ3 354 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 ANP32CO43423 234 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 BMP4P12644 408 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 HOXB4P17483 251 aaPredicted RBP7.61□□□□□ -1.19
VPS36-202ENST00000462289 BAG6P46379 1132 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 SNRPNP63162 240 aaKnown RBP7.61□□□□□ -1.19
VPS36-202ENST00000462289 CTBSQ01459 385 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 NFE2L2Q16236 605 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 EML3Q32P44 896 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 SLCO4C1Q6ZQN7 724 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 DEFB132Q7Z7B7 95 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 EDARADDQ8WWZ3 215 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 ZCCHC2Q9C0B9 1178 aaKnown RBP7.61□□□□□ -1.19
VPS36-202ENST00000462289 SLC52A2Q9HAB3 445 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 ZDHHC3Q9NYG2 299 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 PCDHGC4Q9Y5F7 938 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 C4AP0C0L4 1744 aa7.61□□□□□ -1.19
VPS36-202ENST00000462289 PALLDQ8WX93 1383 aa7.6□□□□□ -1.19
VPS36-202ENST00000462289 RUNDC1Q96C34 613 aa7.6□□□□□ -1.19
VPS36-202ENST00000462289 PNNQ9H307 717 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms