RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 PI16Q6UXB8 463 aa20.03■□□□□ 0.8
YIPF3-205ENST00000460547 TMEM87AQ8NBN3 555 aa20.03■□□□□ 0.8
YIPF3-205ENST00000460547 AGXT2Q9BYV1 514 aa20.03■□□□□ 0.8
YIPF3-205ENST00000460547 SEC31BQ9NQW1 1179 aa20.03■□□□□ 0.8
YIPF3-205ENST00000460547 FOXP2O15409 715 aa20.02■□□□□ 0.8
YIPF3-205ENST00000460547 LMNB1P20700 586 aa20.02■□□□□ 0.8
YIPF3-205ENST00000460547 HOXA10P31260 410 aaPredicted RBP20.02■□□□□ 0.8
YIPF3-205ENST00000460547 MRE11P49959 708 aa20.02■□□□□ 0.8
YIPF3-205ENST00000460547 UBE3CQ15386 1083 aa20.02■□□□□ 0.8
YIPF3-205ENST00000460547 SF3B3Q15393 1217 aaKnown RBP20.02■□□□□ 0.8
YIPF3-205ENST00000460547 WASHC4Q2M389 1173 aa20.02■□□□□ 0.8
YIPF3-205ENST00000460547 FOXD4L5Q5VV16 416 aaPredicted RBP20.02■□□□□ 0.8
YIPF3-205ENST00000460547 DHX32Q7L7V1 743 aaKnown RBP20.02■□□□□ 0.8
YIPF3-205ENST00000460547 ZNF526Q8TF50 670 aaPredicted RBP20.02■□□□□ 0.8
YIPF3-205ENST00000460547 FOXD4L4Q8WXT5 416 aaPredicted RBP20.02■□□□□ 0.8
YIPF3-205ENST00000460547 CDC5LQ99459 802 aaKnown RBP20.02■□□□□ 0.8
YIPF3-205ENST00000460547 GPBP1L1Q9HC44 474 aaPredicted RBP20.02■□□□□ 0.8
YIPF3-205ENST00000460547 ATP6V1DQ9Y5K8 247 aa20.02■□□□□ 0.8
YIPF3-205ENST00000460547 PDCP20941 246 aa20.01■□□□□ 0.79
YIPF3-205ENST00000460547 NECAB1Q8N987 351 aa20.01■□□□□ 0.79
YIPF3-205ENST00000460547 TCEANC2Q96MN5 208 aa20.01■□□□□ 0.79
YIPF3-205ENST00000460547 COL11A2P13942 1736 aaPredicted RBP20.01■□□□□ 0.79
YIPF3-205ENST00000460547 LAMA4Q16363 1823 aa20.01■□□□□ 0.79
YIPF3-205ENST00000460547 DOCK2Q92608 1830 aa20.01■□□□□ 0.79
YIPF3-205ENST00000460547 F13A1P00488 732 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 EXOSC10Q01780 885 aaKnown RBP20■□□□□ 0.79
YIPF3-205ENST00000460547 CCDC93Q567U6 631 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 FBXL16Q8N461 479 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 GTF3C6Q969F1 213 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 CRAMP1Q96RY5 1269 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 MTMR6Q9Y217 621 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 E7EWF7 191 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 NFKBIEO00221 500 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 ZNF445P59923 1031 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 Q6ZUG5 572 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 C3orf67Q6ZVT6 689 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 GPT2Q8TD30 523 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 C7orf43Q8WVR3 580 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 TMX4Q9H1E5 349 aaPredicted RBP20■□□□□ 0.79
YIPF3-205ENST00000460547 TAOK3Q9H2K8 898 aa20■□□□□ 0.79
YIPF3-205ENST00000460547 PIH1D3Q9NQM4 214 aaKnown RBP20■□□□□ 0.79
YIPF3-205ENST00000460547 A0A1B0GUL6 1792 aa19.99■□□□□ 0.79
YIPF3-205ENST00000460547 GPAA1O43292 621 aa19.99■□□□□ 0.79
YIPF3-205ENST00000460547 HELBQ8NG08 1087 aaPredicted RBP19.99■□□□□ 0.79
YIPF3-205ENST00000460547 PUS7LQ9H0K6 701 aaKnown RBP19.99■□□□□ 0.79
YIPF3-205ENST00000460547 IMMTQ16891 758 aaKnown RBP19.98■□□□□ 0.79
YIPF3-205ENST00000460547 RTKN2Q8IZC4 609 aa19.98■□□□□ 0.79
YIPF3-205ENST00000460547 CHAMP1Q96JM3 812 aa19.98■□□□□ 0.79
YIPF3-205ENST00000460547 SLC9C2Q5TAH2 1124 aa19.97■□□□□ 0.79
YIPF3-205ENST00000460547 CC2D2BQ6DHV5 1058 aa19.97■□□□□ 0.79
YIPF3-205ENST00000460547 SPATA5Q8NB90 893 aa19.97■□□□□ 0.79
YIPF3-205ENST00000460547 COL4A1P02462 1669 aa19.97■□□□□ 0.79
YIPF3-205ENST00000460547 TCRBV5S4A2TA0A5A2 114 aa19.97■□□□□ 0.79
YIPF3-205ENST00000460547 XRCC6P12956 609 aaKnown RBP eCLIP19.97■□□□□ 0.79
YIPF3-205ENST00000460547 PDE6AP16499 860 aa19.97■□□□□ 0.79
YIPF3-205ENST00000460547 CHRNDQ07001 517 aa19.97■□□□□ 0.79
YIPF3-205ENST00000460547 RASGRF1Q13972 1273 aa19.97■□□□□ 0.79
YIPF3-205ENST00000460547 LLPHQ9BRT6 129 aaKnown RBP19.97■□□□□ 0.79
YIPF3-205ENST00000460547 GRPEL1Q9HAV7 217 aa19.97■□□□□ 0.79
YIPF3-205ENST00000460547 ZMYM6O95789 1325 aa19.96■□□□□ 0.79
YIPF3-205ENST00000460547 LTBP3Q9NS15 1303 aa19.96■□□□□ 0.79
YIPF3-205ENST00000460547 PFKFB2O60825 505 aa19.96■□□□□ 0.79
YIPF3-205ENST00000460547 CAVIN1Q6NZI2 390 aaKnown RBP19.96■□□□□ 0.79
YIPF3-205ENST00000460547 BRF1Q92994 677 aa19.96■□□□□ 0.79
YIPF3-205ENST00000460547 SLX4Q8IY92 1834 aa19.96■□□□□ 0.79
YIPF3-205ENST00000460547 TNRC6CQ9HCJ0 1690 aaKnown RBP19.96■□□□□ 0.79
YIPF3-205ENST00000460547 ZNF804BA4D1E1 1349 aa19.95■□□□□ 0.78
YIPF3-205ENST00000460547 WDR19Q8NEZ3 1342 aa19.95■□□□□ 0.78
YIPF3-205ENST00000460547 PPEF1O14829 653 aaPredicted RBP19.95■□□□□ 0.78
YIPF3-205ENST00000460547 FGAP02671 866 aa19.95■□□□□ 0.78
YIPF3-205ENST00000460547 ZSCAN23Q3MJ62 389 aa19.95■□□□□ 0.78
YIPF3-205ENST00000460547 TTLL5Q6EMB2 1281 aa19.95■□□□□ 0.78
YIPF3-205ENST00000460547 OLFM4Q6UX06 510 aa19.95■□□□□ 0.78
YIPF3-205ENST00000460547 ANKRD18AQ8IVF6 992 aa19.95■□□□□ 0.78
YIPF3-205ENST00000460547 BSDC1Q9NW68 430 aaPredicted RBP19.95■□□□□ 0.78
YIPF3-205ENST00000460547 ZNF532Q9HCE3 1301 aa19.95■□□□□ 0.78
YIPF3-205ENST00000460547 IDH1O75874 414 aaKnown RBP19.94■□□□□ 0.78
YIPF3-205ENST00000460547 BBOX1O75936 387 aa19.94■□□□□ 0.78
YIPF3-205ENST00000460547 PRELPP51888 382 aa19.94■□□□□ 0.78
YIPF3-205ENST00000460547 EVCP57679 992 aa19.94■□□□□ 0.78
YIPF3-205ENST00000460547 GRIPAP1Q4V328 841 aa19.94■□□□□ 0.78
YIPF3-205ENST00000460547 LARP1BQ659C4 914 aaKnown RBP19.94■□□□□ 0.78
YIPF3-205ENST00000460547 GAS2L3Q86XJ1 694 aa19.94■□□□□ 0.78
YIPF3-205ENST00000460547 CHMP4CQ96CF2 233 aa19.94■□□□□ 0.78
YIPF3-205ENST00000460547 MAP3K12Q12852 859 aa19.94■□□□□ 0.78
YIPF3-205ENST00000460547 UBE4AQ14139 1066 aa19.94■□□□□ 0.78
YIPF3-205ENST00000460547 ZC3H4Q9UPT8 1303 aaKnown RBP19.93■□□□□ 0.78
YIPF3-205ENST00000460547 NCLP19338 710 aaKnown RBP19.93■□□□□ 0.78
YIPF3-205ENST00000460547 FGD1P98174 961 aa19.93■□□□□ 0.78
YIPF3-205ENST00000460547 ALX1Q15699 326 aa19.93■□□□□ 0.78
YIPF3-205ENST00000460547 CSPP1Q1MSJ5 1256 aa19.93■□□□□ 0.78
YIPF3-205ENST00000460547 SMARCC2Q8TAQ2 1214 aa19.93■□□□□ 0.78
YIPF3-205ENST00000460547 ZNF274Q96GC6 653 aaPredicted RBP19.93■□□□□ 0.78
YIPF3-205ENST00000460547 BRPF3Q9ULD4 1205 aa19.93■□□□□ 0.78
YIPF3-205ENST00000460547 GRAPQ13588 217 aa19.92■□□□□ 0.78
YIPF3-205ENST00000460547 DPY19L2Q6NUT2 758 aa19.92■□□□□ 0.78
YIPF3-205ENST00000460547 USP48Q86UV5 1035 aa19.92■□□□□ 0.78
YIPF3-205ENST00000460547 MB21D2Q8IYB1 491 aaPredicted RBP19.92■□□□□ 0.78
YIPF3-205ENST00000460547 GRAPLQ8TC17 118 aaPredicted RBP19.92■□□□□ 0.78
YIPF3-205ENST00000460547 VPS37CA5D8V6 355 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms