RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ZNF592Q92610 1267 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 GPHNQ9NQX3 736 aaPredicted RBP14.56□□□□□ -0.08
LINC00959-201ENST00000456581 COL4A1P02462 1669 aa14.55□□□□□ -0.08
LINC00959-201ENST00000456581 APOBRQ0VD83 1088 aa14.55□□□□□ -0.08
LINC00959-201ENST00000456581 RESTQ13127 1097 aa14.55□□□□□ -0.08
LINC00959-201ENST00000456581 CCDC102BQ68D86 513 aa14.55□□□□□ -0.08
LINC00959-201ENST00000456581 GOLPH3LQ9H4A5 285 aa14.55□□□□□ -0.08
LINC00959-201ENST00000456581 CLSTN2Q9H4D0 955 aa14.55□□□□□ -0.08
LINC00959-201ENST00000456581 PIH1D3Q9NQM4 214 aaKnown RBP14.55□□□□□ -0.08
LINC00959-201ENST00000456581 FBXO3Q9UK99 471 aa14.55□□□□□ -0.08
LINC00959-201ENST00000456581 TAF1P21675 1872 aa14.55□□□□□ -0.08
LINC00959-201ENST00000456581 AKAP11Q9UKA4 1901 aa14.55□□□□□ -0.08
LINC00959-201ENST00000456581 RFX7Q2KHR2 1363 aa14.55□□□□□ -0.08
LINC00959-201ENST00000456581 NTSR2O95665 410 aa14.55□□□□□ -0.08
LINC00959-201ENST00000456581 ZNF75DP51815 510 aa14.55□□□□□ -0.08
LINC00959-201ENST00000456581 NCBP1Q09161 790 aaKnown RBP14.55□□□□□ -0.08
LINC00959-201ENST00000456581 ZSCAN25Q6NSZ9 544 aa14.55□□□□□ -0.08
LINC00959-201ENST00000456581 IDH1O75874 414 aaKnown RBP14.54□□□□□ -0.08
LINC00959-201ENST00000456581 ELP1O95163 1332 aa14.54□□□□□ -0.08
LINC00959-201ENST00000456581 PDCP20941 246 aa14.54□□□□□ -0.08
LINC00959-201ENST00000456581 OTUD7BQ6GQQ9 843 aa14.54□□□□□ -0.08
LINC00959-201ENST00000456581 MPHOSPH8Q99549 860 aa14.54□□□□□ -0.08
LINC00959-201ENST00000456581 SCAND2PQ9GZW5 306 aaPredicted RBP14.54□□□□□ -0.08
LINC00959-201ENST00000456581 CLIP2Q9UDT6 1046 aa14.54□□□□□ -0.08
LINC00959-201ENST00000456581 SRP68Q9UHB9 627 aaKnown RBP14.54□□□□□ -0.08
LINC00959-201ENST00000456581 USP21Q9UK80 565 aa14.54□□□□□ -0.08
LINC00959-201ENST00000456581 DENND2AQ9ULE3 1009 aa14.54□□□□□ -0.08
LINC00959-201ENST00000456581 IQSEC3Q9UPP2 1182 aaPredicted RBP14.54□□□□□ -0.08
LINC00959-201ENST00000456581 NPHP1O15259 732 aa14.53□□□□□ -0.08
LINC00959-201ENST00000456581 VPS72Q15906 364 aa14.53□□□□□ -0.08
LINC00959-201ENST00000456581 E7EWF7 191 aa14.53□□□□□ -0.08
LINC00959-201ENST00000456581 CTDNEP1O95476 244 aa14.53□□□□□ -0.08
LINC00959-201ENST00000456581 DMTNQ08495 405 aa14.53□□□□□ -0.08
LINC00959-201ENST00000456581 SLC9C2Q5TAH2 1124 aa14.53□□□□□ -0.08
LINC00959-201ENST00000456581 NKX2-3Q8TAU0 364 aa14.53□□□□□ -0.08
LINC00959-201ENST00000456581 DSCC1Q9BVC3 393 aa14.53□□□□□ -0.08
LINC00959-201ENST00000456581 TRMT1Q9NXH9 659 aaKnown RBP14.53□□□□□ -0.08
LINC00959-201ENST00000456581 GOLGA6L6A8MZA4 724 aa14.52□□□□□ -0.08
LINC00959-201ENST00000456581 ERFEQ4G0M1 354 aa14.52□□□□□ -0.08
LINC00959-201ENST00000456581 PLA2G4DQ86XP0 818 aa14.52□□□□□ -0.08
LINC00959-201ENST00000456581 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.52□□□□□ -0.08
LINC00959-201ENST00000456581 GJB4Q9NTQ9 266 aa14.52□□□□□ -0.08
LINC00959-201ENST00000456581 WWC3Q9ULE0 1092 aa14.52□□□□□ -0.08
LINC00959-201ENST00000456581 LAMA4Q16363 1823 aa14.52□□□□□ -0.08
LINC00959-201ENST00000456581 FGAP02671 866 aa14.52□□□□□ -0.09
LINC00959-201ENST00000456581 ANKRD1Q15327 319 aa14.52□□□□□ -0.09
LINC00959-201ENST00000456581 GPAA1O43292 621 aa14.51□□□□□ -0.09
LINC00959-201ENST00000456581 BCAMP50895 628 aa14.51□□□□□ -0.09
LINC00959-201ENST00000456581 CHAF1AQ13111 956 aaPredicted RBP14.51□□□□□ -0.09
LINC00959-201ENST00000456581 KRT32Q14532 448 aa14.51□□□□□ -0.09
LINC00959-201ENST00000456581 PTPN21Q16825 1174 aa14.51□□□□□ -0.09
LINC00959-201ENST00000456581 MTERF4Q7Z6M4 381 aaKnown RBP14.51□□□□□ -0.09
LINC00959-201ENST00000456581 SMARCC1Q92922 1105 aaPredicted RBP14.51□□□□□ -0.09
LINC00959-201ENST00000456581 USP28Q96RU2 1077 aa14.51□□□□□ -0.09
LINC00959-201ENST00000456581 FGFR2P21802 821 aa14.51□□□□□ -0.09
LINC00959-201ENST00000456581 ADD1P35611 737 aaKnown RBP14.51□□□□□ -0.09
LINC00959-201ENST00000456581 PUM3Q15397 648 aaKnown RBP14.51□□□□□ -0.09
LINC00959-201ENST00000456581 FILIP1Q7Z7B0 1213 aa14.51□□□□□ -0.09
LINC00959-201ENST00000456581 TNNT1P13805 278 aa14.51□□□□□ -0.09
LINC00959-201ENST00000456581 RASGRF1Q13972 1273 aa14.51□□□□□ -0.09
LINC00959-201ENST00000456581 TBC1D9BQ66K14 1250 aa14.51□□□□□ -0.09
LINC00959-201ENST00000456581 CCAR1Q8IX12 1150 aaKnown RBP14.51□□□□□ -0.09
LINC00959-201ENST00000456581 ANKRD7Q92527 254 aa14.51□□□□□ -0.09
LINC00959-201ENST00000456581 DDX19AQ9NUU7 478 aaKnown RBP14.51□□□□□ -0.09
LINC00959-201ENST00000456581 DHX32Q7L7V1 743 aaKnown RBP14.5□□□□□ -0.09
LINC00959-201ENST00000456581 SLC51AQ86UW1 340 aa14.5□□□□□ -0.09
LINC00959-201ENST00000456581 APPBP2Q92624 585 aa14.5□□□□□ -0.09
LINC00959-201ENST00000456581 SPEF2Q9C093 1822 aa14.5□□□□□ -0.09
LINC00959-201ENST00000456581 PTPDC1A2A3K4 754 aa14.5□□□□□ -0.09
LINC00959-201ENST00000456581 FNBP4Q8N3X1 1017 aaPredicted RBP14.5□□□□□ -0.09
LINC00959-201ENST00000456581 NSUN7Q8NE18 718 aaKnown RBP14.5□□□□□ -0.09
LINC00959-201ENST00000456581 TDRD7Q8NHU6 1098 aaKnown RBP14.5□□□□□ -0.09
LINC00959-201ENST00000456581 LPIN2Q92539 896 aa14.5□□□□□ -0.09
LINC00959-201ENST00000456581 ZNF532Q9HCE3 1301 aa14.49□□□□□ -0.09
LINC00959-201ENST00000456581 TPD52L1Q16890 204 aaPredicted RBP14.49□□□□□ -0.09
LINC00959-201ENST00000456581 CCDC152Q4G0S7 254 aa14.49□□□□□ -0.09
LINC00959-201ENST00000456581 PARP10Q53GL7 1025 aa14.49□□□□□ -0.09
LINC00959-201ENST00000456581 RBM43Q6ZSC3 357 aaKnown RBP14.49□□□□□ -0.09
LINC00959-201ENST00000456581 INCENPQ9NQS7 918 aa14.49□□□□□ -0.09
LINC00959-201ENST00000456581 ST7Q9NRC1 585 aa14.49□□□□□ -0.09
LINC00959-201ENST00000456581 GNPATO15228 680 aa14.49□□□□□ -0.09
LINC00959-201ENST00000456581 CTIFO43310 598 aaKnown RBP14.49□□□□□ -0.09
LINC00959-201ENST00000456581 ADD2P35612 726 aa14.49□□□□□ -0.09
LINC00959-201ENST00000456581 IQCB1Q15051 598 aa14.49□□□□□ -0.09
LINC00959-201ENST00000456581 LRRN4CLQ8ND94 238 aa14.49□□□□□ -0.09
LINC00959-201ENST00000456581 DDX60Q8IY21 1712 aaKnown RBP14.48□□□□□ -0.09
LINC00959-201ENST00000456581 EXOSC10Q01780 885 aaKnown RBP14.48□□□□□ -0.09
LINC00959-201ENST00000456581 CHRNDQ07001 517 aa14.48□□□□□ -0.09
LINC00959-201ENST00000456581 MROH5Q6ZUA9 1318 aa14.48□□□□□ -0.09
LINC00959-201ENST00000456581 PDE6AP16499 860 aa14.48□□□□□ -0.09
LINC00959-201ENST00000456581 SNW1Q13573 536 aaKnown RBP14.48□□□□□ -0.09
LINC00959-201ENST00000456581 ALDH8A1Q9H2A2 487 aaPredicted RBP14.48□□□□□ -0.09
LINC00959-201ENST00000456581 MYH7P12883 1935 aa14.47□□□□□ -0.09
LINC00959-201ENST00000456581 APPP05067 770 aa14.47□□□□□ -0.09
LINC00959-201ENST00000456581 ZFYP08048 801 aaPredicted RBP14.47□□□□□ -0.09
LINC00959-201ENST00000456581 ARID4AP29374 1257 aaPredicted RBP14.47□□□□□ -0.09
LINC00959-201ENST00000456581 IGHMBP2P38935 993 aaKnown RBP14.47□□□□□ -0.09
LINC00959-201ENST00000456581 ME1P48163 572 aa14.47□□□□□ -0.09
LINC00959-201ENST00000456581 SPATA5Q8NB90 893 aa14.47□□□□□ -0.09
LINC00959-201ENST00000456581 A0A1B0GVL5 298 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms