RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 CRKP46108 304 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 HTRA3P83110 453 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 SCARF1Q14162 830 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 GRIK5Q16478 980 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 NBPF9Q3BBW0 867 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 PI16Q6UXB8 463 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 CDC37L1Q7L3B6 337 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 DZIP1Q86YF9 867 aaKnown RBP8.67□□□□□ -1.02
COMMD1-205ENST00000455659 CLASRPQ8N2M8 674 aaKnown RBP8.67□□□□□ -1.02
COMMD1-205ENST00000455659 RHPN1Q8TCX5 695 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 TEKT1Q969V4 418 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 VEZTQ9HBM0 779 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 CREBZFQ9NS37 354 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 SERPINA10Q9UK55 444 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 SUGT1Q9Y2Z0 365 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 SUPT16HQ9Y5B9 1047 aaKnown RBP8.67□□□□□ -1.02
COMMD1-205ENST00000455659 PCDHAC2Q9Y5I4 1007 aa8.67□□□□□ -1.02
COMMD1-205ENST00000455659 SSC5DA1L4H1 1573 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 AOX1Q06278 1338 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 CLRN2A0PK11 232 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 TMEM88BA6NKF7 163 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 ZBTB22O15209 634 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 RAB11FIP3O75154 756 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 CELF2O95319 508 aaKnown RBP8.66□□□□□ -1.02
COMMD1-205ENST00000455659 LDHBP07195 334 aaKnown RBP8.66□□□□□ -1.02
COMMD1-205ENST00000455659 MCAMP43121 646 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 FMR1Q06787 632 aaKnown RBP eCLIP8.66□□□□□ -1.02
COMMD1-205ENST00000455659 CCDC158Q5M9N0 1113 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 SPATA5Q8NB90 893 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 MTMR14Q8NCE2 650 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 EAF2Q96CJ1 260 aaPredicted RBP8.66□□□□□ -1.02
COMMD1-205ENST00000455659 ZBED3Q96IU2 234 aaPredicted RBP8.66□□□□□ -1.02
COMMD1-205ENST00000455659 LRRCC1Q9C099 1032 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 CCDC8Q9H0W5 538 aaPredicted RBP8.66□□□□□ -1.02
COMMD1-205ENST00000455659 ABCF2Q9UG63 623 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 PGAP2Q9UHJ9 254 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 PCDHB15Q9Y5E8 787 aa8.66□□□□□ -1.02
COMMD1-205ENST00000455659 IFIT2P09913 472 aaKnown RBP8.65□□□□□ -1.02
COMMD1-205ENST00000455659 DIXDC1Q155Q3 683 aa8.65□□□□□ -1.02
COMMD1-205ENST00000455659 SPDYE2Q495Y8 402 aa8.65□□□□□ -1.02
COMMD1-205ENST00000455659 USP48Q86UV5 1035 aa8.65□□□□□ -1.02
COMMD1-205ENST00000455659 CDCA5Q96FF9 252 aa8.65□□□□□ -1.02
COMMD1-205ENST00000455659 TMOD2Q9NZR1 351 aa8.65□□□□□ -1.02
COMMD1-205ENST00000455659 HMG20BQ9P0W2 317 aa8.65□□□□□ -1.02
COMMD1-205ENST00000455659 ABT1Q9ULW3 272 aaKnown RBP8.65□□□□□ -1.02
COMMD1-205ENST00000455659 SCAF8Q9UPN6 1271 aaKnown RBP8.65□□□□□ -1.02
COMMD1-205ENST00000455659 DDX60LQ5H9U9 1706 aaKnown RBP8.65□□□□□ -1.03
COMMD1-205ENST00000455659 CNTNAP1P78357 1384 aa8.64□□□□□ -1.03
COMMD1-205ENST00000455659 RFX7Q2KHR2 1363 aa8.64□□□□□ -1.03
COMMD1-205ENST00000455659 RPAP1Q9BWH6 1393 aaPredicted RBP8.64□□□□□ -1.03
COMMD1-205ENST00000455659 LAMB1P07942 1786 aa8.64□□□□□ -1.03
COMMD1-205ENST00000455659 IRX6P78412 446 aaPredicted RBP8.64□□□□□ -1.03
COMMD1-205ENST00000455659 HDLBPQ00341 1268 aaKnown RBP8.64□□□□□ -1.03
COMMD1-205ENST00000455659 AAMPQ13685 434 aa8.64□□□□□ -1.03
COMMD1-205ENST00000455659 TNFAIP1Q13829 316 aa8.64□□□□□ -1.03
COMMD1-205ENST00000455659 SPTY2D1Q68D10 685 aaPredicted RBP8.64□□□□□ -1.03
COMMD1-205ENST00000455659 ERICH6Q7L0X2 663 aa8.64□□□□□ -1.03
COMMD1-205ENST00000455659 EXOC6Q8TAG9 804 aa8.64□□□□□ -1.03
COMMD1-205ENST00000455659 ZDHHC15Q96MV8 337 aa8.64□□□□□ -1.03
COMMD1-205ENST00000455659 DAGLAQ9Y4D2 1042 aa8.64□□□□□ -1.03
COMMD1-205ENST00000455659 MROH7-TTC4A0A0A0MT08 1334 aa8.63□□□□□ -1.03
COMMD1-205ENST00000455659 GAKO14976 1311 aa8.63□□□□□ -1.03
COMMD1-205ENST00000455659 SMARCA5O60264 1052 aaPredicted RBP8.63□□□□□ -1.03
COMMD1-205ENST00000455659 NF2P35240 595 aa8.63□□□□□ -1.03
COMMD1-205ENST00000455659 DLK2Q6UY11 383 aa8.63□□□□□ -1.03
COMMD1-205ENST00000455659 PAXIP1Q6ZW49 1069 aaPredicted RBP8.63□□□□□ -1.03
COMMD1-205ENST00000455659 GPATCH3Q96I76 525 aa8.63□□□□□ -1.03
COMMD1-205ENST00000455659 ZNF512BQ96KM6 892 aaPredicted RBP8.63□□□□□ -1.03
COMMD1-205ENST00000455659 PRMT6Q96LA8 375 aaPredicted RBP8.63□□□□□ -1.03
COMMD1-205ENST00000455659 DNAJC2Q99543 621 aaKnown RBP8.63□□□□□ -1.03
COMMD1-205ENST00000455659 DCTPP1Q9H773 170 aa8.63□□□□□ -1.03
COMMD1-205ENST00000455659 TDRD3Q9H7E2 651 aaKnown RBP8.63□□□□□ -1.03
COMMD1-205ENST00000455659 SNRKQ9NRH2 765 aa8.63□□□□□ -1.03
COMMD1-205ENST00000455659 RAI14Q9P0K7 980 aa8.63□□□□□ -1.03
COMMD1-205ENST00000455659 ZNF70Q9UC06 446 aaPredicted RBP8.63□□□□□ -1.03
COMMD1-205ENST00000455659 MKRN1Q9UHC7 482 aaKnown RBP8.63□□□□□ -1.03
COMMD1-205ENST00000455659 PPP2R3BQ9Y5P8 575 aa8.63□□□□□ -1.03
COMMD1-205ENST00000455659 ATAD5Q96QE3 1844 aa8.63□□□□□ -1.03
COMMD1-205ENST00000455659 MYH1P12882 1939 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 MYH8P13535 1937 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 DOCK1Q14185 1865 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 SIPA1L1O43166 1804 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 ZAP70P43403 619 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 TNNI2P48788 182 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 CACNB3P54284 484 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 MECOMQ03112 1051 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 HDAC1Q13547 482 aaPredicted RBP8.62□□□□□ -1.03
COMMD1-205ENST00000455659 HHIPL2Q6UWX4 724 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 TBC1D9Q6ZT07 1266 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 SLF2Q8IX21 1173 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 KLRG1Q96E93 195 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 DEFB129Q9H1M3 183 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 GBA2Q9HCG7 927 aaPredicted RBP8.62□□□□□ -1.03
COMMD1-205ENST00000455659 LRP2BPQ9P2M1 347 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 ZBTB47Q9UFB7 747 aaPredicted RBP8.62□□□□□ -1.03
COMMD1-205ENST00000455659 TLL2Q9Y6L7 1015 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 NDUFB9Q9Y6M9 179 aa8.62□□□□□ -1.03
COMMD1-205ENST00000455659 RASSF10A6NK89 507 aa8.61□□□□□ -1.03
COMMD1-205ENST00000455659 TCP10L2B9ZVM9 353 aa8.61□□□□□ -1.03
COMMD1-205ENST00000455659 IDH1O75874 414 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms