RNA–Protein interactions for RNA: ENST00000451943.6

DDB1-203, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,224 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-203ENST00000451943 GAS2L3Q86XJ1 694 aa10.15□□□□□ -0.78
DDB1-203ENST00000451943 NLGN1Q8N2Q7 840 aa10.15□□□□□ -0.78
DDB1-203ENST00000451943 HELBQ8NG08 1087 aaPredicted RBP10.15□□□□□ -0.78
DDB1-203ENST00000451943 FOXD4L4Q8WXT5 416 aaPredicted RBP10.15□□□□□ -0.78
DDB1-203ENST00000451943 BRF1Q92994 677 aa10.15□□□□□ -0.78
DDB1-203ENST00000451943 SETDB2Q96T68 719 aa10.15□□□□□ -0.78
DDB1-203ENST00000451943 LAMA4Q16363 1823 aa10.14□□□□□ -0.79
DDB1-203ENST00000451943 ZNF532Q9HCE3 1301 aa10.14□□□□□ -0.79
DDB1-203ENST00000451943 ZNF213O14771 459 aa10.14□□□□□ -0.79
DDB1-203ENST00000451943 ZPR1O75312 459 aa10.14□□□□□ -0.79
DDB1-203ENST00000451943 IDH1O75874 414 aaKnown RBP10.14□□□□□ -0.79
DDB1-203ENST00000451943 GYS1P13807 737 aa10.14□□□□□ -0.79
DDB1-203ENST00000451943 NCLP19338 710 aaKnown RBP10.14□□□□□ -0.79
DDB1-203ENST00000451943 C1QTNF8P60827 252 aa10.14□□□□□ -0.79
DDB1-203ENST00000451943 HMGN5P82970 282 aaKnown RBP10.14□□□□□ -0.79
DDB1-203ENST00000451943 IFFO2Q5TF58 517 aa10.14□□□□□ -0.79
DDB1-203ENST00000451943 CAVIN1Q6NZI2 390 aaKnown RBP10.14□□□□□ -0.79
DDB1-203ENST00000451943 USP48Q86UV5 1035 aa10.14□□□□□ -0.79
DDB1-203ENST00000451943 MB21D2Q8IYB1 491 aaPredicted RBP10.14□□□□□ -0.79
DDB1-203ENST00000451943 CHAMP1Q96JM3 812 aa10.14□□□□□ -0.79
DDB1-203ENST00000451943 STRBPQ96SI9 672 aaKnown RBP10.14□□□□□ -0.79
DDB1-203ENST00000451943 PDS5AQ29RF7 1337 aaKnown RBP10.13□□□□□ -0.79
DDB1-203ENST00000451943 A0A0G2JLW4 131 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 PATL2C9JE40 543 aaKnown RBP10.13□□□□□ -0.79
DDB1-203ENST00000451943 IGSF3O75054 1194 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 MCM5P33992 734 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 RFC4P35249 363 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 BCAMP50895 628 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 UBE2HP62256 183 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 SCRN1Q12765 414 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 TMED8Q6PL24 325 aaPredicted RBP10.13□□□□□ -0.79
DDB1-203ENST00000451943 TPTE2Q6XPS3 522 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 C3orf67Q6ZVT6 689 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 RGS22Q8NE09 1264 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 NCOA7Q8NI08 942 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 SYAP1Q96A49 352 aaPredicted RBP10.13□□□□□ -0.79
DDB1-203ENST00000451943 NLRP3Q96P20 1036 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 TMEM63CQ9P1W3 806 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 WWC3Q9ULE0 1092 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 MINPP1Q9UNW1 487 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 KIF3AQ9Y496 699 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 A0A1B0GUL6 1792 aa10.13□□□□□ -0.79
DDB1-203ENST00000451943 COL4A1P02462 1669 aa10.12□□□□□ -0.79
DDB1-203ENST00000451943 ELP1O95163 1332 aa10.12□□□□□ -0.79
DDB1-203ENST00000451943 SALL1Q9NSC2 1324 aa10.12□□□□□ -0.79
DDB1-203ENST00000451943 SNAP23O00161 211 aa10.12□□□□□ -0.79
DDB1-203ENST00000451943 SEMA3EO15041 775 aa10.12□□□□□ -0.79
DDB1-203ENST00000451943 GNAT2P19087 354 aa10.12□□□□□ -0.79
DDB1-203ENST00000451943 PDIA3P30101 505 aaKnown RBP10.12□□□□□ -0.79
DDB1-203ENST00000451943 TGFB2P61812 414 aa10.12□□□□□ -0.79
DDB1-203ENST00000451943 FGD1P98174 961 aa10.12□□□□□ -0.79
DDB1-203ENST00000451943 NBPF5PQ86XG9 351 aaPredicted RBP10.12□□□□□ -0.79
DDB1-203ENST00000451943 NSUN7Q8NE18 718 aaKnown RBP10.12□□□□□ -0.79
DDB1-203ENST00000451943 GNL3LQ9NVN8 582 aaKnown RBP10.12□□□□□ -0.79
DDB1-203ENST00000451943 SRP68Q9UHB9 627 aaKnown RBP10.12□□□□□ -0.79
DDB1-203ENST00000451943 NSFL1CQ9UNZ2 370 aaKnown RBP10.12□□□□□ -0.79
DDB1-203ENST00000451943 CNPY2Q9Y2B0 182 aa10.12□□□□□ -0.79
DDB1-203ENST00000451943 CARMIL3Q8ND23 1372 aa10.12□□□□□ -0.79
DDB1-203ENST00000451943 CEP350Q5VT06 3117 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 VPS37CA5D8V6 355 aaPredicted RBP10.11□□□□□ -0.79
DDB1-203ENST00000451943 CTDNEP1O95476 244 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 GTF2E1P29083 439 aaPredicted RBP10.11□□□□□ -0.79
DDB1-203ENST00000451943 TM4SF1P30408 202 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 RPS8P62241 208 aaKnown RBP10.11□□□□□ -0.79
DDB1-203ENST00000451943 KRT85P78386 507 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 APOBRQ0VD83 1088 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 STK3Q13188 491 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 NAA16Q6N069 864 aaPredicted RBP10.11□□□□□ -0.79
DDB1-203ENST00000451943 LRSAM1Q6UWE0 723 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 CDC37L1Q7L3B6 337 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 FBXO33Q7Z6M2 555 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 RALYLQ86SE5 291 aaKnown RBP10.11□□□□□ -0.79
DDB1-203ENST00000451943 MAGEB6Q8N7X4 407 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 CELF1Q92879 486 aaKnown RBP10.11□□□□□ -0.79
DDB1-203ENST00000451943 AIDAQ96BJ3 306 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 LRRC2Q9BYS8 371 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 ANKRD2Q9GZV1 360 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 NBPF3Q9H094 633 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 ZSCAN16Q9H4T2 348 aaPredicted RBP10.11□□□□□ -0.79
DDB1-203ENST00000451943 BRPF3Q9ULD4 1205 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 DENND2AQ9ULE3 1009 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 KIF13BQ9NQT8 1826 aa10.11□□□□□ -0.79
DDB1-203ENST00000451943 PRC1O43663 620 aa10.1□□□□□ -0.79
DDB1-203ENST00000451943 JAK2O60674 1132 aa10.1□□□□□ -0.79
DDB1-203ENST00000451943 GADD45BO75293 160 aaPredicted RBP10.1□□□□□ -0.79
DDB1-203ENST00000451943 LETM1O95202 739 aaPredicted RBP10.1□□□□□ -0.79
DDB1-203ENST00000451943 ANTXR2P58335 489 aa10.1□□□□□ -0.79
DDB1-203ENST00000451943 HAND2P61296 217 aa10.1□□□□□ -0.79
DDB1-203ENST00000451943 DNM1Q05193 864 aaKnown RBP10.1□□□□□ -0.79
DDB1-203ENST00000451943 TRDNQ13061 729 aa10.1□□□□□ -0.79
DDB1-203ENST00000451943 RESTQ13127 1097 aa10.1□□□□□ -0.79
DDB1-203ENST00000451943 CAVIN4Q5BKX8 364 aa10.1□□□□□ -0.79
DDB1-203ENST00000451943 BICDL1Q6ZP65 573 aa10.1□□□□□ -0.79
DDB1-203ENST00000451943 IFNL3Q8IZI9 196 aa10.1□□□□□ -0.79
DDB1-203ENST00000451943 FAM84BQ96KN1 310 aaPredicted RBP10.1□□□□□ -0.79
DDB1-203ENST00000451943 MTA3Q9BTC8 594 aa10.1□□□□□ -0.79
DDB1-203ENST00000451943 SCAND2PQ9GZW5 306 aaPredicted RBP10.1□□□□□ -0.79
DDB1-203ENST00000451943 GDPD2Q9HCC8 539 aa10.1□□□□□ -0.79
DDB1-203ENST00000451943 RBM27Q9P2N5 1060 aaKnown RBP10.1□□□□□ -0.79
DDB1-203ENST00000451943 C4AP0C0L4 1744 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms