RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 DEKP35659 375 aaKnown RBP5.66□□□□□ -1.5
HMGB3P22-202ENST00000451823 MTMR3Q13615 1198 aa5.66□□□□□ -1.5
HMGB3P22-202ENST00000451823 ANKRD34AQ69YU3 496 aa5.66□□□□□ -1.5
HMGB3P22-202ENST00000451823 FDX2Q6P4F2 183 aa5.66□□□□□ -1.5
HMGB3P22-202ENST00000451823 TMEM102Q8N9M5 508 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P22-202ENST00000451823 HELQQ8TDG4 1101 aa5.66□□□□□ -1.5
HMGB3P22-202ENST00000451823 PPP4R2Q9NY27 417 aa5.66□□□□□ -1.5
HMGB3P22-202ENST00000451823 SOX13Q9UN79 622 aa5.66□□□□□ -1.5
HMGB3P22-202ENST00000451823 AQRO60306 1485 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB3P22-202ENST00000451823 MAP4P27816 1152 aaKnown RBP5.65□□□□□ -1.5
HMGB3P22-202ENST00000451823 RXRBP28702 533 aa5.65□□□□□ -1.5
HMGB3P22-202ENST00000451823 TXKP42681 527 aa5.65□□□□□ -1.5
HMGB3P22-202ENST00000451823 IKBKEQ14164 716 aa5.65□□□□□ -1.5
HMGB3P22-202ENST00000451823 NFKBIBQ15653 356 aa5.65□□□□□ -1.5
HMGB3P22-202ENST00000451823 EXOSC6Q5RKV6 272 aaKnown RBP5.65□□□□□ -1.5
HMGB3P22-202ENST00000451823 NUTM2GQ5VZR2 741 aa5.65□□□□□ -1.5
HMGB3P22-202ENST00000451823 ASAP3Q8TDY4 903 aa5.65□□□□□ -1.5
HMGB3P22-202ENST00000451823 BSNDQ8WZ55 320 aa5.65□□□□□ -1.5
HMGB3P22-202ENST00000451823 MFSD14AQ96MC6 490 aa5.65□□□□□ -1.5
HMGB3P22-202ENST00000451823 DRD2P14416 443 aa5.64□□□□□ -1.51
HMGB3P22-202ENST00000451823 HOXA10P31260 410 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P22-202ENST00000451823 SGO2Q562F6 1265 aa5.64□□□□□ -1.51
HMGB3P22-202ENST00000451823 ALKBH2Q6NS38 261 aa5.64□□□□□ -1.51
HMGB3P22-202ENST00000451823 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P22-202ENST00000451823 VN1R5Q7Z5H4 357 aa5.64□□□□□ -1.51
HMGB3P22-202ENST00000451823 DTX1Q86Y01 620 aa5.64□□□□□ -1.51
HMGB3P22-202ENST00000451823 KRTAP19-1Q8IUB9 90 aa5.64□□□□□ -1.51
HMGB3P22-202ENST00000451823 FBXL6Q8N531 539 aa5.64□□□□□ -1.51
HMGB3P22-202ENST00000451823 ZKSCAN3Q9BRR0 538 aa5.64□□□□□ -1.51
HMGB3P22-202ENST00000451823 RNF123Q5XPI4 1314 aa5.64□□□□□ -1.51
HMGB3P22-202ENST00000451823 UACAQ9BZF9 1416 aa5.64□□□□□ -1.51
HMGB3P22-202ENST00000451823 HMGXB3Q12766 1538 aa5.64□□□□□ -1.51
HMGB3P22-202ENST00000451823 GAS2O43903 313 aaKnown RBP5.63□□□□□ -1.51
HMGB3P22-202ENST00000451823 PHACTR2O75167 634 aa5.63□□□□□ -1.51
HMGB3P22-202ENST00000451823 TNFRSF21O75509 655 aa5.63□□□□□ -1.51
HMGB3P22-202ENST00000451823 DLGAP3O95886 979 aa5.63□□□□□ -1.51
HMGB3P22-202ENST00000451823 SPINK2P20155 84 aa5.63□□□□□ -1.51
HMGB3P22-202ENST00000451823 SSFA2P28290 1259 aa5.63□□□□□ -1.51
HMGB3P22-202ENST00000451823 USP11P51784 963 aa5.63□□□□□ -1.51
HMGB3P22-202ENST00000451823 SHISA5Q8N114 240 aa5.63□□□□□ -1.51
HMGB3P22-202ENST00000451823 ATG3Q9NT62 314 aa5.63□□□□□ -1.51
HMGB3P22-202ENST00000451823 FOXD3Q9UJU5 478 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P22-202ENST00000451823 HFM1A2PYH4 1435 aa5.63□□□□□ -1.51
HMGB3P22-202ENST00000451823 PCF11O94913 1555 aaKnown RBP5.63□□□□□ -1.51
HMGB3P22-202ENST00000451823 ABCA5Q8WWZ7 1642 aa5.63□□□□□ -1.51
HMGB3P22-202ENST00000451823 GSTM4Q03013 218 aa5.62□□□□□ -1.51
HMGB3P22-202ENST00000451823 USP26Q9BXU7 913 aa5.62□□□□□ -1.51
HMGB3P22-202ENST00000451823 TMPRSS13Q9BYE2 586 aa5.62□□□□□ -1.51
HMGB3P22-202ENST00000451823 CYP4F12Q9HCS2 524 aa5.62□□□□□ -1.51
HMGB3P22-202ENST00000451823 HIF3AQ9Y2N7 669 aa5.62□□□□□ -1.51
HMGB3P22-202ENST00000451823 LEMD3Q9Y2U8 911 aa5.62□□□□□ -1.51
HMGB3P22-202ENST00000451823 CFTRP13569 1480 aa5.62□□□□□ -1.51
HMGB3P22-202ENST00000451823 PTPN23Q9H3S7 1636 aa5.62□□□□□ -1.51
HMGB3P22-202ENST00000451823 CARNS1A5YM72 827 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 F13BP05160 661 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 POLR3DP05423 398 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 EDN3P14138 238 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 PRDM2Q13029 1718 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 WASHC2AQ641Q2 1341 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 CDPF1Q6NVV7 123 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 SMG8Q8ND04 991 aaKnown RBP5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 GIMAP7Q8NHV1 300 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 FBLIM1Q8WUP2 373 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 FMNL2Q96PY5 1086 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 FYCO1Q9BQS8 1478 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 ZFYVE28Q9HCC9 887 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 LATS2Q9NRM7 1088 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 CNTLNQ9NXG0 1405 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 PIM2Q9P1W9 311 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 NOP58Q9Y2X3 529 aaKnown RBP5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 RNF114Q9Y508 228 aa5.61□□□□□ -1.51
HMGB3P22-202ENST00000451823 EFCAB5A4FU69 1503 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 DENND4BO75064 1496 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 CCDC18Q5T9S5 1454 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 FGD5Q6ZNL6 1462 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 PTPRKQ15262 1439 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 CASKIN1Q8WXD9 1431 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 ZBED9Q6R2W3 1325 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 LOC100289279A0A1B0GTE1 492 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 FAM95CA0A1B0GW59 222 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 TMEM88BA6NKF7 163 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 METTL12A8MUP2 240 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 FAM13AO94988 1023 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 ESRRAP11474 423 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 NPR3P17342 541 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 FKBP4Q02790 459 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 PEAR1Q5VY43 1037 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 OSBPL1AQ9BXW6 950 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 KRTAP9-9Q9BYP9 154 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 ANO2Q9NQ90 1003 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 CCDC87Q9NVE4 849 aa5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 POLR1AO95602 1720 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P22-202ENST00000451823 NAIPQ13075 1403 aa5.59□□□□□ -1.51
HMGB3P22-202ENST00000451823 NCOA1Q15788 1441 aa5.59□□□□□ -1.51
HMGB3P22-202ENST00000451823 FGD6Q6ZV73 1430 aa5.59□□□□□ -1.51
HMGB3P22-202ENST00000451823 SMG6Q86US8 1419 aaKnown RBP5.59□□□□□ -1.51
HMGB3P22-202ENST00000451823 USP5P45974 858 aa5.59□□□□□ -1.51
HMGB3P22-202ENST00000451823 HNRNPUQ00839 825 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGB3P22-202ENST00000451823 SOX4Q06945 474 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms