RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 PPP4R3BQ5MIZ7 849 aa18■□□□□ 0.47
CCHCR1-208ENST00000451521 NAP1L2Q9ULW6 460 aaPredicted RBP18■□□□□ 0.47
CCHCR1-208ENST00000451521 VPS37CA5D8V6 355 aaPredicted RBP18■□□□□ 0.47
CCHCR1-208ENST00000451521 EVCP57679 992 aa18■□□□□ 0.47
CCHCR1-208ENST00000451521 SCRN1Q12765 414 aa18■□□□□ 0.47
CCHCR1-208ENST00000451521 RASGRF1Q13972 1273 aa18■□□□□ 0.47
CCHCR1-208ENST00000451521 ZNF710Q8N1W2 664 aa18■□□□□ 0.47
CCHCR1-208ENST00000451521 SMARCC2Q8TAQ2 1214 aa18■□□□□ 0.47
CCHCR1-208ENST00000451521 TSC1Q92574 1164 aa18■□□□□ 0.47
CCHCR1-208ENST00000451521 ZNF532Q9HCE3 1301 aa18■□□□□ 0.47
CCHCR1-208ENST00000451521 IDH1O75874 414 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-208ENST00000451521 DNTTIP2Q5QJE6 756 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-208ENST00000451521 TBC1D9BQ66K14 1250 aa17.99■□□□□ 0.47
CCHCR1-208ENST00000451521 TRIM37O94972 964 aa17.99■□□□□ 0.47
CCHCR1-208ENST00000451521 C3orf67Q6ZVT6 689 aa17.99■□□□□ 0.47
CCHCR1-208ENST00000451521 CDC37L1Q7L3B6 337 aa17.99■□□□□ 0.47
CCHCR1-208ENST00000451521 ZNF274Q96GC6 653 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-208ENST00000451521 LRRC4BQ9NT99 713 aa17.99■□□□□ 0.47
CCHCR1-208ENST00000451521 WWC3Q9ULE0 1092 aa17.99■□□□□ 0.47
CCHCR1-208ENST00000451521 ONECUT3O60422 494 aaPredicted RBP17.98■□□□□ 0.47
CCHCR1-208ENST00000451521 JAK2O60674 1132 aa17.98■□□□□ 0.47
CCHCR1-208ENST00000451521 UBE2HP62256 183 aa17.98■□□□□ 0.47
CCHCR1-208ENST00000451521 DNM1Q05193 864 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-208ENST00000451521 APOBRQ0VD83 1088 aa17.98■□□□□ 0.47
CCHCR1-208ENST00000451521 PRIMPOLQ96LW4 560 aa17.98■□□□□ 0.47
CCHCR1-208ENST00000451521 WDR19Q8NEZ3 1342 aa17.98■□□□□ 0.47
CCHCR1-208ENST00000451521 ANKRD18AQ8IVF6 992 aa17.97■□□□□ 0.47
CCHCR1-208ENST00000451521 MB21D2Q8IYB1 491 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-208ENST00000451521 SYAP1Q96A49 352 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-208ENST00000451521 BSDC1Q9NW68 430 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-208ENST00000451521 TAF1P21675 1872 aa17.97■□□□□ 0.47
CCHCR1-208ENST00000451521 ZNF213O14771 459 aa17.97■□□□□ 0.47
CCHCR1-208ENST00000451521 NYXQ9GZU5 481 aa17.97■□□□□ 0.47
CCHCR1-208ENST00000451521 BCAMP50895 628 aa17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 HAND2P61296 217 aa17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 MAP3K12Q12852 859 aa17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 ALX1Q15699 326 aa17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 NSUN7Q8NE18 718 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 PIBF1Q8WXW3 757 aa17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 STRBPQ96SI9 672 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 ZMYM6O95789 1325 aa17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 PDIA3P30101 505 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 GTF2F1P35269 517 aaKnown RBP eCLIP17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 NCOA7Q8NI08 942 aa17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 CHMP4CQ96CF2 233 aa17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 ZNF804BA4D1E1 1349 aa17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 BRWD3Q6RI45 1802 aa17.96■□□□□ 0.47
CCHCR1-208ENST00000451521 CTDNEP1O95476 244 aa17.95■□□□□ 0.46
CCHCR1-208ENST00000451521 HMGN5P82970 282 aaKnown RBP17.95■□□□□ 0.46
CCHCR1-208ENST00000451521 CBX1P83916 185 aa17.95■□□□□ 0.46
CCHCR1-208ENST00000451521 MPNDQ8N594 471 aa17.95■□□□□ 0.46
CCHCR1-208ENST00000451521 NBPF3Q9H094 633 aa17.95■□□□□ 0.46
CCHCR1-208ENST00000451521 UBE4AQ14139 1066 aa17.95■□□□□ 0.46
CCHCR1-208ENST00000451521 CHST3Q7LGC8 479 aa17.95■□□□□ 0.46
CCHCR1-208ENST00000451521 ZNF830Q96NB3 372 aaPredicted RBP17.95■□□□□ 0.46
CCHCR1-208ENST00000451521 RTCBQ9Y3I0 505 aaKnown RBP17.95■□□□□ 0.46
CCHCR1-208ENST00000451521 SALL1Q9NSC2 1324 aa17.95■□□□□ 0.46
CCHCR1-208ENST00000451521 C4AP0C0L4 1744 aa17.95■□□□□ 0.46
CCHCR1-208ENST00000451521 C4BP0C0L5 1744 aa17.95■□□□□ 0.46
CCHCR1-208ENST00000451521 FIBPO43427 364 aa17.94■□□□□ 0.46
CCHCR1-208ENST00000451521 NOLC1Q14978 699 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCHCR1-208ENST00000451521 SLC51AQ86UW1 340 aa17.94■□□□□ 0.46
CCHCR1-208ENST00000451521 SETDB2Q96T68 719 aa17.94■□□□□ 0.46
CCHCR1-208ENST00000451521 WTIPA6NIX2 430 aaPredicted RBP17.94■□□□□ 0.46
CCHCR1-208ENST00000451521 ZPR1O75312 459 aa17.94■□□□□ 0.46
CCHCR1-208ENST00000451521 ANTXR2P58335 489 aa17.94■□□□□ 0.46
CCHCR1-208ENST00000451521 MAGEB6Q8N7X4 407 aa17.94■□□□□ 0.46
CCHCR1-208ENST00000451521 PRC1O43663 620 aa17.93■□□□□ 0.46
CCHCR1-208ENST00000451521 KRT85P78386 507 aa17.93■□□□□ 0.46
CCHCR1-208ENST00000451521 AIDAQ96BJ3 306 aa17.93■□□□□ 0.46
CCHCR1-208ENST00000451521 ELP1O95163 1332 aa17.93■□□□□ 0.46
CCHCR1-208ENST00000451521 FAM196AQ6ZSG2 479 aa17.93■□□□□ 0.46
CCHCR1-208ENST00000451521 MINPP1Q9UNW1 487 aa17.93■□□□□ 0.46
CCHCR1-208ENST00000451521 PATL2C9JE40 543 aaKnown RBP17.92■□□□□ 0.46
CCHCR1-208ENST00000451521 KRT27Q7Z3Y8 459 aa17.92■□□□□ 0.46
CCHCR1-208ENST00000451521 FERMT3Q86UX7 667 aa17.92■□□□□ 0.46
CCHCR1-208ENST00000451521 ARHGEF1Q92888 912 aaKnown RBP17.92■□□□□ 0.46
CCHCR1-208ENST00000451521 PTPDC1A2A3K4 754 aa17.92■□□□□ 0.46
CCHCR1-208ENST00000451521 RALYLQ86SE5 291 aaKnown RBP17.92■□□□□ 0.46
CCHCR1-208ENST00000451521 KLHL34Q8N239 644 aa17.92■□□□□ 0.46
CCHCR1-208ENST00000451521 C17orf53Q8N3J3 647 aaPredicted RBP17.92■□□□□ 0.46
CCHCR1-208ENST00000451521 MYH15Q9Y2K3 1946 aa17.92■□□□□ 0.46
CCHCR1-208ENST00000451521 PNPLA7Q6ZV29 1317 aa17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 CCT2P78371 535 aaKnown RBP17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 RESTQ13127 1097 aa17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 NAA16Q6N069 864 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 TBC1D10CQ8IV04 446 aa17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 FAM184AQ8NB25 1140 aa17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 CELF1Q92879 486 aaKnown RBP17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 DDX11Q96FC9 970 aa17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 NLRP3Q96P20 1036 aa17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 KIF3AQ9Y496 699 aa17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 TIAM2Q8IVF5 1701 aa17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 CCDC183Q5T5S1 534 aa17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 NBPF5PQ86XG9 351 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 ZSCAN16Q9H4T2 348 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 TTC12Q9H892 705 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 GPHNQ9NQX3 736 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 USP25Q9UHP3 1055 aa17.91■□□□□ 0.46
CCHCR1-208ENST00000451521 CHD4Q14839 1912 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms