RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 APPBP2Q92624 585 aa13.13□□□□□ -0.31
SYVN1-204ENST00000449943 CCDC34Q96HJ3 373 aa13.13□□□□□ -0.31
SYVN1-204ENST00000449943 LAMA4Q16363 1823 aa13.13□□□□□ -0.31
SYVN1-204ENST00000449943 PCDH11XQ9BZA7 1347 aa13.13□□□□□ -0.31
SYVN1-204ENST00000449943 PCDH11YQ9BZA8 1340 aa13.13□□□□□ -0.31
SYVN1-204ENST00000449943 RBM6P78332 1123 aaKnown RBP13.12□□□□□ -0.31
SYVN1-204ENST00000449943 ANO1Q5XXA6 986 aa13.12□□□□□ -0.31
SYVN1-204ENST00000449943 TMOD3Q9NYL9 352 aa13.12□□□□□ -0.31
SYVN1-204ENST00000449943 TMEM94Q12767 1356 aa13.12□□□□□ -0.31
SYVN1-204ENST00000449943 PFKFB1P16118 471 aa13.12□□□□□ -0.31
SYVN1-204ENST00000449943 MICU3Q86XE3 530 aa13.12□□□□□ -0.31
SYVN1-204ENST00000449943 CCAR2Q8N163 923 aaKnown RBP13.12□□□□□ -0.31
SYVN1-204ENST00000449943 A0A1W2PQ27 194 aa13.12□□□□□ -0.31
SYVN1-204ENST00000449943 A0A1W2PQ64 194 aa13.12□□□□□ -0.31
SYVN1-204ENST00000449943 A0A1W2PQD8 194 aa13.12□□□□□ -0.31
SYVN1-204ENST00000449943 TPM4P67936 248 aa13.12□□□□□ -0.31
SYVN1-204ENST00000449943 DMTNQ08495 405 aa13.12□□□□□ -0.31
SYVN1-204ENST00000449943 NBPF11Q86T75 865 aa13.12□□□□□ -0.31
SYVN1-204ENST00000449943 PHKBQ93100 1093 aa13.12□□□□□ -0.31
SYVN1-204ENST00000449943 ZFYP08048 801 aaPredicted RBP13.12□□□□□ -0.31
SYVN1-204ENST00000449943 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
SYVN1-204ENST00000449943 KIF23Q02241 960 aaPredicted RBP13.11□□□□□ -0.31
SYVN1-204ENST00000449943 PTPN21Q16825 1174 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 NFXL1Q6ZNB6 911 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 ALG1Q9BT22 464 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 POLR3EQ9NVU0 708 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 YEATS4O95619 227 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 GSDMDP57764 484 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 SLC9C2Q5TAH2 1124 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 CGNQ9P2M7 1197 aaKnown RBP13.11□□□□□ -0.31
SYVN1-204ENST00000449943 METAP2P50579 478 aaKnown RBP eCLIP13.11□□□□□ -0.31
SYVN1-204ENST00000449943 PIP4K2BP78356 416 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 BRAPQ7Z569 592 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 CNNM1Q9NRU3 951 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 MROH7-TTC4A0A0A0MT08 1334 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 SFPQP23246 707 aaKnown RBP eCLIP13.11□□□□□ -0.31
SYVN1-204ENST00000449943 LDHAL6AQ6ZMR3 332 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 STK11IPQ8N1F8 1099 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 KIF18AQ8NI77 898 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 NKX2-3Q8TAU0 364 aa13.11□□□□□ -0.31
SYVN1-204ENST00000449943 NOL10Q9BSC4 688 aaKnown RBP13.11□□□□□ -0.31
SYVN1-204ENST00000449943 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
SYVN1-204ENST00000449943 TCIRG1Q13488 830 aa13.1□□□□□ -0.31
SYVN1-204ENST00000449943 NYAP1Q6ZVC0 841 aa13.1□□□□□ -0.31
SYVN1-204ENST00000449943 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.1□□□□□ -0.314e-7■■■□□ 16.8
SYVN1-204ENST00000449943 KIF1AQ12756 1690 aa13.1□□□□□ -0.31
SYVN1-204ENST00000449943 B4E1Z4 1266 aa13.1□□□□□ -0.31
SYVN1-204ENST00000449943 MCAMP43121 646 aa13.1□□□□□ -0.31
SYVN1-204ENST00000449943 SYKP43405 635 aa13.1□□□□□ -0.31
SYVN1-204ENST00000449943 NLRP12P59046 1061 aa13.1□□□□□ -0.31
SYVN1-204ENST00000449943 ELF2Q15723 593 aa13.1□□□□□ -0.31
SYVN1-204ENST00000449943 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
SYVN1-204ENST00000449943 SENP2Q9HC62 589 aa13.1□□□□□ -0.31
SYVN1-204ENST00000449943 ATG3Q9NT62 314 aa13.1□□□□□ -0.31
SYVN1-204ENST00000449943 MST1RQ04912 1400 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 ATP1A3P13637 1013 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 HSP90AA4PQ58FG1 418 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 ARMCX5Q6P1M9 558 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.09□□□□□ -0.31
SYVN1-204ENST00000449943 INCENPQ9NQS7 918 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 EVCP57679 992 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 CYB5R4Q7L1T6 521 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 CLIC6Q96NY7 704 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 ISCA1Q9BUE6 129 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 TNS3Q68CZ2 1445 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 SYT10Q6XYQ8 523 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 HOMER1Q86YM7 354 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 DNAJC10Q8IXB1 793 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 ERVV-2B6SEH9 535 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 PNOCQ13519 176 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 AMOTL1Q8IY63 956 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 GREM2Q9H772 168 aa13.09□□□□□ -0.31
SYVN1-204ENST00000449943 ALS2Q96Q42 1657 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 UBE2Q2LH0YL09 131 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 SERPINC1P01008 464 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 ITGA6P23229 1130 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 HSPA2P54652 639 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 AXDND1Q5T1B0 1012 aaPredicted RBP13.08□□□□□ -0.32
SYVN1-204ENST00000449943 KRT40Q6A162 431 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 ANGEL1Q9UNK9 670 aaKnown RBP13.08□□□□□ -0.32
SYVN1-204ENST00000449943 AKAP17AQ02040 695 aaKnown RBP13.08□□□□□ -0.32
SYVN1-204ENST00000449943 GOLGA8FQ08AF8 430 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 GOLGA8DPQ0D2H9 430 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 OGFRQ9NZT2 677 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 CMA1P23946 247 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 FANCCQ00597 558 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 SYCP1Q15431 976 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 SPECC1Q5M775 1068 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 SPATA31A3Q5VYP0 1347 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 E4F1Q66K89 784 aaPredicted RBP13.08□□□□□ -0.32
SYVN1-204ENST00000449943 CCDC150Q8NCX0 1101 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 HELBQ8NG08 1087 aaPredicted RBP13.08□□□□□ -0.32
SYVN1-204ENST00000449943 PPP1R13BQ96KQ4 1090 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 FEZ1Q99689 392 aa13.08□□□□□ -0.32
SYVN1-204ENST00000449943 NEDD4P46934 1319 aa13.07□□□□□ -0.32
SYVN1-204ENST00000449943 CDC27P30260 824 aa13.07□□□□□ -0.32
SYVN1-204ENST00000449943 TRIM29Q14134 588 aa13.07□□□□□ -0.32
SYVN1-204ENST00000449943 NBPF3Q9H094 633 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms