RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 BAG1Q99933 345 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 SH3GL1Q99961 368 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 PHF23Q9BUL5 403 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 KLC4Q9NSK0 619 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 PDRG1Q9NUG6 133 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 PDP2Q9P2J9 529 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 MEFVO15553 781 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 CLTAP09496 248 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 DHX9Q08211 1270 aaKnown RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 CCDC102BQ68D86 513 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 RUFY3Q7L099 469 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 PPP2R3CQ969Q6 453 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 U3KPZ7 1027 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 CFTRP13569 1480 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 NUP160Q12769 1436 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 SPATA31E1Q6ZUB1 1445 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 MAP4K4O95819 1239 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 PCK1P35558 622 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 PAPOLAP51003 745 aaKnown RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 KANK4Q5T7N3 995 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 CCDC13Q8IYE1 715 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 FNBP4Q8N3X1 1017 aaPredicted RBP3.29□□□□□ -1.88
CHD9-203ENST00000447540 SLC52A1Q9NWF4 448 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 HDAC6Q9UBN7 1215 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 SSX2IPQ9Y2D8 614 aa3.29□□□□□ -1.88
CHD9-203ENST00000447540 GOLGA6BA6NDN3 693 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 IGSF3O75054 1194 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 ZC3H12AQ5D1E8 599 aaKnown RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 LRRC8AQ8IWT6 810 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 RIOK1Q9BRS2 568 aaKnown RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 GMNNO75496 209 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 MYZAPP0CAP1 466 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 ZSCAN22P10073 491 aaPredicted RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 EIF2S2P20042 333 aaKnown RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 HNRNPH1P31943 449 aaKnown RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 TUBA1BP68363 451 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 PDE1BQ01064 536 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 PSMD2Q13200 908 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 RIPK1Q13546 671 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CCDC144BQ3MJ40 725 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CCDC153Q494R4 210 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 TUBA1AQ71U36 451 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.28□□□□□ -1.881e-6■■■□□ 16.2
CHD9-203ENST00000447540 TRIM74Q86UV6 250 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 TRIM73Q86UV7 250 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CCDC144CPQ8IYA2 1237 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 HIC2Q96JB3 615 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 TRAPPC9Q96Q05 1148 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CCDC68Q9H2F9 335 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 PLXNC1O60486 1568 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 DNMBPQ6XZF7 1577 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 ITSN2Q9NZM3 1697 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 ZBED4O75132 1171 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 PARNO95453 639 aaKnown RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 RNASELQ05823 741 aaKnown RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 CUL4AQ13619 759 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 GRAMD4Q6IC98 578 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 P3H3Q8IVL6 736 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CCAR1Q8IX12 1150 aaKnown RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 CENPKQ9BS16 269 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 TMEM63CQ9P1W3 806 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 ORC3Q9UBD5 711 aaPredicted RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 STOML1Q9UBI4 398 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 SUPT6HQ7KZ85 1726 aaKnown RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 ALDH3A1P30838 453 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 EPS15P42566 896 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 NFE2L2Q16236 605 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 KANK3Q6NY19 840 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 TMX1Q9H3N1 280 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 TSKSQ9UJT2 592 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CDC23Q9UJX2 597 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 POLR3AO14802 1390 aaPredicted RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 TBCAO75347 108 aaKnown RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 CCND1P24385 295 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 RNF187Q5TA31 235 aaPredicted RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 SRGAP1Q7Z6B7 1085 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 PASD1Q8IV76 773 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 FBXO41Q8TF61 875 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 RSPH1Q8WYR4 309 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 OPTNQ96CV9 577 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 ZNF692Q9BU19 519 aaPredicted RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 ARHGAP10A1A4S6 786 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CPA3P15088 417 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 ZNF280DQ6N043 979 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CATIPQ7Z7H3 387 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CNGA4Q8IV77 575 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CACTINQ8WUQ7 758 aaKnown RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 DIABLOQ9NR28 239 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CEP131Q9UPN4 1083 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 FIBPO43427 364 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 ATP5JP18859 108 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 ERCC6LQ2NKX8 1250 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 NME8Q8N427 588 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 GBP5Q96PP8 586 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 SAMD15Q9P1V8 674 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 CARD8Q9Y2G2 431 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 SOS1Q07889 1333 aaPredicted RBP3.28□□□□□ -1.88
CHD9-203ENST00000447540 ABCC2Q92887 1545 aa3.28□□□□□ -1.88
CHD9-203ENST00000447540 BIRC3Q13489 604 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 853.3 ms