RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 NRXN3Q9Y4C0 1643 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 FAM135BQ49AJ0 1406 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 PRAG1Q86YV5 1406 aa11.33□□□□□ -0.6
SMARCE1-206ENST00000447024 PPLO60437 1756 aa11.32□□□□□ -0.6
SMARCE1-206ENST00000447024 ARSDP51689 593 aa11.32□□□□□ -0.6
SMARCE1-206ENST00000447024 DGKZQ13574 1117 aa11.32□□□□□ -0.6
SMARCE1-206ENST00000447024 ELMSAN1Q6PJG2 1045 aa11.32□□□□□ -0.6
SMARCE1-206ENST00000447024 ANKMY2Q8IV38 441 aa11.32□□□□□ -0.6
SMARCE1-206ENST00000447024 IFT43Q96FT9 208 aa11.32□□□□□ -0.6
SMARCE1-206ENST00000447024 C19orf44Q9H6X5 657 aa11.32□□□□□ -0.6
SMARCE1-206ENST00000447024 QTRT2Q9H974 415 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-206ENST00000447024 AMOTL2Q9Y2J4 779 aa11.32□□□□□ -0.6
SMARCE1-206ENST00000447024 ALKQ9UM73 1620 aa11.31□□□□□ -0.6
SMARCE1-206ENST00000447024 TARSP26639 723 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-206ENST00000447024 PIP4K2BP78356 416 aa11.31□□□□□ -0.6
SMARCE1-206ENST00000447024 MLLT1Q03111 559 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-206ENST00000447024 WFDC8Q8IUA0 241 aa11.31□□□□□ -0.6
SMARCE1-206ENST00000447024 WFDC12Q8WWY7 111 aa11.31□□□□□ -0.6
SMARCE1-206ENST00000447024 PPP1R12CQ9BZL4 782 aa11.31□□□□□ -0.6
SMARCE1-206ENST00000447024 DCCP43146 1447 aa11.31□□□□□ -0.6
SMARCE1-206ENST00000447024 FAM196BA6NMK8 535 aa11.3□□□□□ -0.6
SMARCE1-206ENST00000447024 RARAP10276 462 aa11.3□□□□□ -0.6
SMARCE1-206ENST00000447024 IREB2P48200 963 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-206ENST00000447024 GPLD1P80108 840 aa11.3□□□□□ -0.6
SMARCE1-206ENST00000447024 METP08581 1390 aa11.29□□□□□ -0.6
SMARCE1-206ENST00000447024 XRN1Q8IZH2 1706 aaKnown RBP11.29□□□□□ -0.6
SMARCE1-206ENST00000447024 PTPRUQ92729 1446 aa11.29□□□□□ -0.6
SMARCE1-206ENST00000447024 HYAL3O43820 417 aaPredicted RBP11.29□□□□□ -0.6
SMARCE1-206ENST00000447024 SASH3O75995 380 aa11.29□□□□□ -0.6
SMARCE1-206ENST00000447024 NOS3P29474 1203 aa11.29□□□□□ -0.6
SMARCE1-206ENST00000447024 TTC9Q92623 222 aa11.29□□□□□ -0.6
SMARCE1-206ENST00000447024 C11orf16Q9NQ32 467 aa11.29□□□□□ -0.6
SMARCE1-206ENST00000447024 PTCH1Q13635 1447 aa11.28□□□□□ -0.6
SMARCE1-206ENST00000447024 MICAL2O94851 1124 aa11.28□□□□□ -0.6
SMARCE1-206ENST00000447024 SLAIN2Q9P270 581 aa11.28□□□□□ -0.6
SMARCE1-206ENST00000447024 IFT172Q9UG01 1749 aa11.27□□□□□ -0.61
SMARCE1-206ENST00000447024 FOXO3O43524 673 aa11.27□□□□□ -0.61
SMARCE1-206ENST00000447024 ATF3P18847 181 aa11.27□□□□□ -0.61
SMARCE1-206ENST00000447024 HSPA1LP34931 641 aa11.27□□□□□ -0.61
SMARCE1-206ENST00000447024 RGL3Q3MIN7 710 aa11.27□□□□□ -0.61
SMARCE1-206ENST00000447024 SMG9Q9H0W8 520 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-206ENST00000447024 MYOM2P54296 1465 aa11.26□□□□□ -0.61
SMARCE1-206ENST00000447024 WEE1P30291 646 aa11.26□□□□□ -0.61
SMARCE1-206ENST00000447024 IGF2-ASQ6U949 168 aa11.26□□□□□ -0.61
SMARCE1-206ENST00000447024 HFE2Q6ZVN8 426 aa11.26□□□□□ -0.61
SMARCE1-206ENST00000447024 C14orf37Q86TY3 774 aa11.26□□□□□ -0.61
SMARCE1-206ENST00000447024 MYO19Q96H55 970 aa11.26□□□□□ -0.61
SMARCE1-206ENST00000447024 MEGF10Q96KG7 1140 aa11.26□□□□□ -0.61
SMARCE1-206ENST00000447024 CALR3Q96L12 384 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-206ENST00000447024 ARXQ96QS3 562 aa11.26□□□□□ -0.61
SMARCE1-206ENST00000447024 ADGRF5Q8IZF2 1346 aa11.26□□□□□ -0.61
SMARCE1-206ENST00000447024 SETD1AO15047 1707 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-206ENST00000447024 PIK3C2GO75747 1445 aa11.26□□□□□ -0.61
SMARCE1-206ENST00000447024 NRXN1Q9ULB1 1477 aa11.25□□□□□ -0.61
SMARCE1-206ENST00000447024 DEAF1O75398 565 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-206ENST00000447024 NRLP54845 237 aa11.25□□□□□ -0.61
SMARCE1-206ENST00000447024 C11orf91Q3C1V1 193 aa11.25□□□□□ -0.61
SMARCE1-206ENST00000447024 VRTNQ9H8Y1 702 aa11.25□□□□□ -0.61
SMARCE1-206ENST00000447024 USP20Q9Y2K6 914 aa11.25□□□□□ -0.61
SMARCE1-206ENST00000447024 EIF2AK2P19525 551 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-206ENST00000447024 C14orf93Q9H972 538 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-206ENST00000447024 ABCC11Q96J66 1382 aa11.24□□□□□ -0.61
SMARCE1-206ENST00000447024 TECPR2O15040 1411 aa11.24□□□□□ -0.61
SMARCE1-206ENST00000447024 ADGRL3Q9HAR2 1447 aa11.24□□□□□ -0.61
SMARCE1-206ENST00000447024 LAMC1P11047 1609 aa11.24□□□□□ -0.61
SMARCE1-206ENST00000447024 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-206ENST00000447024 ARID4AP29374 1257 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-206ENST00000447024 LMOD1P29536 600 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-206ENST00000447024 VTI1AQ96AJ9 217 aa11.23□□□□□ -0.61
SMARCE1-206ENST00000447024 RTCBQ9Y3I0 505 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-206ENST00000447024 LRPPRCP42704 1394 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-206ENST00000447024 OPLAHO14841 1288 aa11.22□□□□□ -0.61
SMARCE1-206ENST00000447024 TLR7Q9NYK1 1049 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-206ENST00000447024 LRFN2Q9ULH4 789 aa11.22□□□□□ -0.61
SMARCE1-206ENST00000447024 RNF112Q9ULX5 631 aa11.22□□□□□ -0.61
SMARCE1-206ENST00000447024 ROBO1Q9Y6N7 1651 aa11.21□□□□□ -0.61
SMARCE1-206ENST00000447024 DHX57Q6P158 1386 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-206ENST00000447024 DLL1O00548 723 aa11.21□□□□□ -0.61
SMARCE1-206ENST00000447024 EGFRP00533 1210 aa11.21□□□□□ -0.61
SMARCE1-206ENST00000447024 PRR23CQ6ZRP0 262 aa11.21□□□□□ -0.61
SMARCE1-206ENST00000447024 KRTAP1-3Q8IUG1 177 aa11.21□□□□□ -0.61
SMARCE1-206ENST00000447024 ROBO2Q9HCK4 1378 aa11.2□□□□□ -0.62
SMARCE1-206ENST00000447024 KRTAP4-12Q9BQ66 201 aa11.2□□□□□ -0.62
SMARCE1-206ENST00000447024 KNDC1Q76NI1 1749 aa11.19□□□□□ -0.62
SMARCE1-206ENST00000447024 XYLBO75191 536 aa11.19□□□□□ -0.62
SMARCE1-206ENST00000447024 TRIM26Q12899 539 aaPredicted RBP11.19□□□□□ -0.62
SMARCE1-206ENST00000447024 PLD4Q96BZ4 506 aa11.19□□□□□ -0.62
SMARCE1-206ENST00000447024 MST1RQ04912 1400 aa11.18□□□□□ -0.62
SMARCE1-206ENST00000447024 YTHDC2Q9H6S0 1430 aaKnown RBP11.18□□□□□ -0.62
SMARCE1-206ENST00000447024 DISP3Q9P2K9 1392 aa11.18□□□□□ -0.62
SMARCE1-206ENST00000447024 AHDC1Q5TGY3 1603 aaPredicted RBP11.18□□□□□ -0.62
SMARCE1-206ENST00000447024 J3QW42 95 aa11.18□□□□□ -0.62
SMARCE1-206ENST00000447024 TREML1Q86YW5 311 aa11.18□□□□□ -0.62
SMARCE1-206ENST00000447024 RGL4Q8IZJ4 473 aa11.18□□□□□ -0.62
SMARCE1-206ENST00000447024 CMTR1Q8N1G2 835 aaKnown RBP11.18□□□□□ -0.62
SMARCE1-206ENST00000447024 DCAF11Q8TEB1 546 aa11.18□□□□□ -0.62
SMARCE1-206ENST00000447024 BRINP3Q76B58 766 aa11.17□□□□□ -0.62
SMARCE1-206ENST00000447024 DZIP1LQ8IYY4 767 aaKnown RBP11.17□□□□□ -0.62
SMARCE1-206ENST00000447024 AKTIPQ9H8T0 292 aa11.17□□□□□ -0.62
SMARCE1-206ENST00000447024 JCADQ9P266 1359 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms