RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 CHRNA5P30532 468 aa23.4■■□□□ 1.34
APTR-204ENST00000440088 NSUN4Q96CB9 384 aaKnown RBP23.4■■□□□ 1.34
APTR-204ENST00000440088 ARMT1Q9H993 441 aa23.4■■□□□ 1.34
APTR-204ENST00000440088 CHMP5Q9NZZ3 219 aa23.4■■□□□ 1.34
APTR-204ENST00000440088 PATL2C9JE40 543 aaKnown RBP23.4■■□□□ 1.34
APTR-204ENST00000440088 HMGB1P09429 215 aaKnown RBP23.4■■□□□ 1.34
APTR-204ENST00000440088 DDIT3P35638 169 aa23.4■■□□□ 1.34
APTR-204ENST00000440088 OLFM4Q6UX06 510 aa23.4■■□□□ 1.34
APTR-204ENST00000440088 MIGA1Q8NAN2 632 aa23.4■■□□□ 1.34
APTR-204ENST00000440088 C10orf71Q711Q0 1435 aa23.4■■□□□ 1.34
APTR-204ENST00000440088 PRDX5P30044 214 aa23.39■■□□□ 1.34
APTR-204ENST00000440088 MECOMQ03112 1051 aa23.39■■□□□ 1.34
APTR-204ENST00000440088 ADGRA1Q86SQ6 560 aa23.39■■□□□ 1.34
APTR-204ENST00000440088 LIMCH1Q9UPQ0 1083 aa23.39■■□□□ 1.34
APTR-204ENST00000440088 JAG2Q9Y219 1238 aa23.39■■□□□ 1.34
APTR-204ENST00000440088 CCDC88AQ3V6T2 1871 aa23.39■■□□□ 1.33
APTR-204ENST00000440088 ZMYM6O95789 1325 aa23.39■■□□□ 1.33
APTR-204ENST00000440088 STOX1Q6ZVD7 989 aa23.38■■□□□ 1.33
APTR-204ENST00000440088 LCORLQ8N3X6 602 aa23.38■■□□□ 1.33
APTR-204ENST00000440088 DUOX1Q9NRD9 1551 aa23.38■■□□□ 1.33
APTR-204ENST00000440088 A0A0G2JLW4 131 aa23.38■■□□□ 1.33
APTR-204ENST00000440088 MAGEB6P1A0A0J9YX57 407 aa23.38■■□□□ 1.33
APTR-204ENST00000440088 E7EWF7 191 aa23.38■■□□□ 1.33
APTR-204ENST00000440088 ZNF213O14771 459 aa23.38■■□□□ 1.33
APTR-204ENST00000440088 CUL4AQ13619 759 aa23.38■■□□□ 1.33
APTR-204ENST00000440088 ALX1Q15699 326 aa23.38■■□□□ 1.33
APTR-204ENST00000440088 ZNF384Q8TF68 577 aa23.38■■□□□ 1.33
APTR-204ENST00000440088 ALDH8A1Q9H2A2 487 aaPredicted RBP23.38■■□□□ 1.33
APTR-204ENST00000440088 CIZ1Q9ULV3 898 aaPredicted RBP23.38■■□□□ 1.33
APTR-204ENST00000440088 MAST2Q6P0Q8 1798 aa23.37■■□□□ 1.33
APTR-204ENST00000440088 COL9A3Q14050 684 aaPredicted RBP23.37■■□□□ 1.33
APTR-204ENST00000440088 ANKRD1Q15327 319 aa23.37■■□□□ 1.33
APTR-204ENST00000440088 ZC3H12CQ9C0D7 883 aaKnown RBP23.37■■□□□ 1.33
APTR-204ENST00000440088 SLX4Q8IY92 1834 aa23.37■■□□□ 1.33
APTR-204ENST00000440088 COA1Q9GZY4 146 aa23.37■■□□□ 1.33
APTR-204ENST00000440088 SLC4A4Q9Y6R1 1079 aa23.37■■□□□ 1.33
APTR-204ENST00000440088 LDHBP07195 334 aaKnown RBP23.36■■□□□ 1.33
APTR-204ENST00000440088 HAND2P61296 217 aa23.36■■□□□ 1.33
APTR-204ENST00000440088 DZIP1Q86YF9 867 aaKnown RBP23.36■■□□□ 1.33
APTR-204ENST00000440088 IFNL3Q8IZI9 196 aa23.36■■□□□ 1.33
APTR-204ENST00000440088 NACAP1Q9BZK3 213 aa23.36■■□□□ 1.33
APTR-204ENST00000440088 CWC22Q9HCG8 908 aaKnown RBP23.36■■□□□ 1.33
APTR-204ENST00000440088 GSG1L2A8MUP6 293 aa23.35■■□□□ 1.33
APTR-204ENST00000440088 RIMBP2O15034 1052 aa23.35■■□□□ 1.33
APTR-204ENST00000440088 INTS4Q96HW7 963 aaKnown RBP23.35■■□□□ 1.33
APTR-204ENST00000440088 EYA3Q99504 573 aa23.35■■□□□ 1.33
APTR-204ENST00000440088 RIOK1Q9BRS2 568 aaKnown RBP23.35■■□□□ 1.33
APTR-204ENST00000440088 NAPBQ9H115 298 aa23.35■■□□□ 1.33
APTR-204ENST00000440088 ZSCAN31Q96LW9 406 aaPredicted RBP23.35■■□□□ 1.33
APTR-204ENST00000440088 EPB41L4AQ9HCS5 686 aaPredicted RBP23.35■■□□□ 1.33
APTR-204ENST00000440088 LAMA4Q16363 1823 aa23.34■■□□□ 1.33
APTR-204ENST00000440088 DHX32Q7L7V1 743 aaKnown RBP23.34■■□□□ 1.33
APTR-204ENST00000440088 TCEANC2Q96MN5 208 aa23.34■■□□□ 1.33
APTR-204ENST00000440088 PRKAB2O43741 272 aa23.33■■□□□ 1.33
APTR-204ENST00000440088 SH2B1Q9NRF2 756 aaPredicted RBP23.33■■□□□ 1.33
APTR-204ENST00000440088 TBC1D22AQ8WUA7 517 aa23.33■■□□□ 1.32
APTR-204ENST00000440088 LARP6Q9BRS8 491 aaKnown RBP23.33■■□□□ 1.32
APTR-204ENST00000440088 ZBTB7AO95365 584 aa23.32■■□□□ 1.32
APTR-204ENST00000440088 CC2D2BQ6DHV5 1058 aa23.32■■□□□ 1.32
APTR-204ENST00000440088 MTFR1LQ9H019 292 aa23.32■■□□□ 1.32
APTR-204ENST00000440088 KIAA1551Q9HCM1 1747 aa23.32■■□□□ 1.32
APTR-204ENST00000440088 DLEC1Q9Y238 1755 aa23.32■■□□□ 1.32
APTR-204ENST00000440088 TDO2P48775 406 aa23.32■■□□□ 1.32
APTR-204ENST00000440088 GSTO1P78417 241 aa23.32■■□□□ 1.32
APTR-204ENST00000440088 TOB2Q14106 344 aaPredicted RBP23.32■■□□□ 1.32
APTR-204ENST00000440088 C7orf43Q8WVR3 580 aa23.32■■□□□ 1.32
APTR-204ENST00000440088 FAM205AQ6ZU69 1335 aa23.31■■□□□ 1.32
APTR-204ENST00000440088 DYNLL1P63167 89 aaKnown RBP23.31■■□□□ 1.32
APTR-204ENST00000440088 UPF1Q92900 1129 aaKnown RBP eCLIP23.31■■□□□ 1.32
APTR-204ENST00000440088 ZNF219Q9P2Y4 722 aaPredicted RBP23.31■■□□□ 1.32
APTR-204ENST00000440088 POLD1P28340 1107 aa23.3■■□□□ 1.32
APTR-204ENST00000440088 EXOSC10Q01780 885 aaKnown RBP23.3■■□□□ 1.32
APTR-204ENST00000440088 MFSD14BQ5SR56 506 aa23.3■■□□□ 1.32
APTR-204ENST00000440088 NCOA7Q8NI08 942 aa23.3■■□□□ 1.32
APTR-204ENST00000440088 G3V3G9 751 aa23.3■■□□□ 1.32
APTR-204ENST00000440088 FGD1P98174 961 aa23.3■■□□□ 1.32
APTR-204ENST00000440088 TRDNQ13061 729 aa23.3■■□□□ 1.32
APTR-204ENST00000440088 DCAF8Q5TAQ9 597 aa23.3■■□□□ 1.32
APTR-204ENST00000440088 Q6ZUG5 572 aa23.3■■□□□ 1.32
APTR-204ENST00000440088 RALYLQ86SE5 291 aaKnown RBP23.3■■□□□ 1.32
APTR-204ENST00000440088 TTLL6Q8N841 843 aa23.3■■□□□ 1.32
APTR-204ENST00000440088 SDR42E1Q8WUS8 393 aa23.3■■□□□ 1.32
APTR-204ENST00000440088 RTFDC1Q9BY42 306 aaPredicted RBP23.3■■□□□ 1.32
APTR-204ENST00000440088 NBPF3Q9H094 633 aa23.3■■□□□ 1.32
APTR-204ENST00000440088 AATFQ9NY61 560 aaKnown RBP eCLIP23.3■■□□□ 1.32
APTR-204ENST00000440088 TPCN1Q9ULQ1 816 aa23.3■■□□□ 1.32
APTR-204ENST00000440088 KIF13BQ9NQT8 1826 aa23.29■■□□□ 1.32
APTR-204ENST00000440088 CHD4Q14839 1912 aa23.29■■□□□ 1.32
APTR-204ENST00000440088 LARGE1O95461 756 aa23.28■■□□□ 1.32
APTR-204ENST00000440088 LDHCP07864 332 aa23.28■■□□□ 1.32
APTR-204ENST00000440088 GTF2IP78347 998 aa23.28■■□□□ 1.32
APTR-204ENST00000440088 R3HDM1Q15032 1099 aaKnown RBP23.28■■□□□ 1.32
APTR-204ENST00000440088 ME3Q16798 604 aa23.28■■□□□ 1.32
APTR-204ENST00000440088 ATF5Q9Y2D1 282 aaPredicted RBP23.28■■□□□ 1.32
APTR-204ENST00000440088 GRIK5Q16478 980 aa23.28■■□□□ 1.32
APTR-204ENST00000440088 TBC1D10CQ8IV04 446 aa23.28■■□□□ 1.32
APTR-204ENST00000440088 CRNKL1Q9BZJ0 848 aaKnown RBP23.28■■□□□ 1.32
APTR-204ENST00000440088 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.28■■□□□ 1.32
APTR-204ENST00000440088 MCM5P33992 734 aa23.27■■□□□ 1.32
APTR-204ENST00000440088 DOK7Q18PE1 504 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms