RNA–Protein interactions for RNA: ENST00000434452.5

DSC3-202, Transcript of desmocollin 3, humanhuman

TSL 5 BASIC

Gene DSC3, Length 6,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-202ENST00000434452 RDH13Q8NBN7 331 aa10.39□□□□□ -0.75
DSC3-202ENST00000434452 FHOD3Q2V2M9 1422 aa10.39□□□□□ -0.75
DSC3-202ENST00000434452 RILPL1Q5EBL4 403 aa10.39□□□□□ -0.75
DSC3-202ENST00000434452 FSIP1Q8NA03 581 aa10.39□□□□□ -0.75
DSC3-202ENST00000434452 HYPKQ9NX55 129 aa10.39□□□□□ -0.75
DSC3-202ENST00000434452 CCDC94Q9BW85 323 aaPredicted RBP10.39□□□□□ -0.75
DSC3-202ENST00000434452 ZSWIM4Q9H7M6 989 aa10.39□□□□□ -0.75
DSC3-202ENST00000434452 RMND1Q9NWS8 449 aa10.39□□□□□ -0.75
DSC3-202ENST00000434452 SLC8A2Q9UPR5 921 aa10.39□□□□□ -0.75
DSC3-202ENST00000434452 SBNO2Q9Y2G9 1366 aa10.39□□□□□ -0.75
DSC3-202ENST00000434452 PSMD2Q13200 908 aa10.39□□□□□ -0.75
DSC3-202ENST00000434452 RPS6KC1Q96S38 1066 aa10.39□□□□□ -0.75
DSC3-202ENST00000434452 TMEM106CQ9BVX2 250 aa10.39□□□□□ -0.75
DSC3-202ENST00000434452 FRMD4BQ9Y2L6 1034 aa10.39□□□□□ -0.75
DSC3-202ENST00000434452 ELF1P32519 619 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 INPP1P49441 399 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 SETDB1Q15047 1291 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 PTPN14Q15678 1187 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 ERCC6LQ2NKX8 1250 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 CEP120Q8N960 986 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 PPFIBP2Q8ND30 876 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 SEC62Q99442 399 aaKnown RBP10.38□□□□□ -0.75
DSC3-202ENST00000434452 ORC3Q9UBD5 711 aaPredicted RBP10.38□□□□□ -0.75
DSC3-202ENST00000434452 MAGEB6P1A0A0J9YX57 407 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 DPYSL4O14531 572 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 POLR3GO15318 223 aaPredicted RBP10.38□□□□□ -0.75
DSC3-202ENST00000434452 MAP7Q14244 749 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 ZCRB1Q8TBF4 217 aaKnown RBP10.38□□□□□ -0.75
DSC3-202ENST00000434452 UBN1Q9NPG3 1134 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 CCNL1Q9UK58 526 aaPredicted RBP10.38□□□□□ -0.75
DSC3-202ENST00000434452 RAB11FIP3O75154 756 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 SLC4A1P02730 911 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 MTERF4Q7Z6M4 381 aaKnown RBP10.38□□□□□ -0.75
DSC3-202ENST00000434452 MYLK4Q86YV6 388 aaPredicted RBP10.38□□□□□ -0.75
DSC3-202ENST00000434452 NCOA7Q8NI08 942 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 APOL6Q9BWW8 343 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 PRKRIP1Q9H875 184 aaPredicted RBP10.38□□□□□ -0.75
DSC3-202ENST00000434452 FAM95CA0A1B0GW59 222 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 NAIPQ13075 1403 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 DPP8Q6V1X1 898 aaPredicted RBP10.38□□□□□ -0.75
DSC3-202ENST00000434452 GBP7Q8N8V2 638 aaPredicted RBP10.38□□□□□ -0.75
DSC3-202ENST00000434452 MTRQ99707 1265 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 TRMT1Q9NXH9 659 aaKnown RBP10.38□□□□□ -0.75
DSC3-202ENST00000434452 PLEKHG3A1L390 1219 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 ANKRD35Q8N283 1001 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 KIFAP3Q92845 792 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 PIDD1Q9HB75 910 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 AMOTL2Q9Y2J4 779 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 TLDC2A0PJX2 215 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 DZIP3Q86Y13 1208 aaKnown RBP10.38□□□□□ -0.75
DSC3-202ENST00000434452 GDAP1Q8TB36 358 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 CCDC68Q9H2F9 335 aa10.38□□□□□ -0.75
DSC3-202ENST00000434452 TCP10Q12799 353 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 PABPC4Q13310 644 aaKnown RBP eCLIP10.37□□□□□ -0.75
DSC3-202ENST00000434452 NCAPG2Q86XI2 1143 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 PALM2Q8IXS6 379 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 CFAP36Q96G28 342 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 LMBR1Q8WVP7 490 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 TTC14Q96N46 770 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 PPIP5K2O43314 1243 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 TTC6Q86TZ1 520 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 LARP6Q9BRS8 491 aaKnown RBP10.37□□□□□ -0.75
DSC3-202ENST00000434452 AP5M1Q9H0R1 490 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 HNRNPCL2B2RXH8 293 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 HNRNPCL1O60812 293 aaKnown RBP10.37□□□□□ -0.75
DSC3-202ENST00000434452 BLVRAP53004 296 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 SND1Q7KZF4 910 aaKnown RBP eCLIP10.37□□□□□ -0.75
DSC3-202ENST00000434452 CCDC170Q8IYT3 715 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 PLIN2Q99541 437 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 ST7Q9NRC1 585 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 MAP3K2Q9Y2U5 619 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 NUB1Q9Y5A7 615 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 IGBP1P78318 339 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.37□□□□□ -0.75
DSC3-202ENST00000434452 SUPT20HQ8NEM7 779 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 TRERF1Q96PN7 1200 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 SRPK1Q96SB4 655 aaKnown RBP10.37□□□□□ -0.75
DSC3-202ENST00000434452 SCAPERQ9BY12 1400 aa10.37□□□□□ -0.75
DSC3-202ENST00000434452 DKC1O60832 514 aaKnown RBP eCLIP10.36□□□□□ -0.75
DSC3-202ENST00000434452 FOXD4Q12950 439 aaPredicted RBP10.36□□□□□ -0.75
DSC3-202ENST00000434452 HSP90AA4PQ58FG1 418 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 BAG1Q99933 345 aaPredicted RBP10.36□□□□□ -0.75
DSC3-202ENST00000434452 FAM8A1Q9UBU6 413 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 SYNDIG1LA6NDD5 238 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 DLGAP5Q15398 846 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 DCLK2Q8N568 766 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 USTQ9Y2C2 406 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 KAT6BQ8WYB5 2073 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 CASQ2O14958 399 aaPredicted RBP10.36□□□□□ -0.75
DSC3-202ENST00000434452 APOBRQ0VD83 1088 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 DNAAF4Q8WXU2 420 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 STMN4Q9H169 189 aaPredicted RBP10.36□□□□□ -0.75
DSC3-202ENST00000434452 SUDS3Q9H7L9 328 aaPredicted RBP10.36□□□□□ -0.75
DSC3-202ENST00000434452 PFDN6O15212 129 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 SMARCA5O60264 1052 aaPredicted RBP10.36□□□□□ -0.75
DSC3-202ENST00000434452 ZEB2O60315 1214 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 RTN1Q16799 776 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 TMC6Q7Z403 805 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 LRRC43Q8N309 656 aa10.36□□□□□ -0.75
DSC3-202ENST00000434452 MIGA1Q8NAN2 632 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms