RNA–Protein interactions for RNA: ENST00000433083.6

PHC1-201, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best) BASIC

Gene PHC1, Length 5,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-201ENST00000433083 TMEM87BQ96K49 555 aa12.79□□□□□ -0.36
PHC1-201ENST00000433083 TRIM75PA6NK02 468 aa12.79□□□□□ -0.36
PHC1-201ENST00000433083 PPIP5K2O43314 1243 aa12.79□□□□□ -0.36
PHC1-201ENST00000433083 CCDC40Q4G0X9 1142 aa12.79□□□□□ -0.36
PHC1-201ENST00000433083 NAP1L4Q99733 375 aaKnown RBP12.79□□□□□ -0.36
PHC1-201ENST00000433083 ZSCAN12O43309 604 aa12.79□□□□□ -0.36
PHC1-201ENST00000433083 CRKLP46109 303 aaKnown RBP12.79□□□□□ -0.36
PHC1-201ENST00000433083 MTIF2P46199 727 aaKnown RBP12.79□□□□□ -0.36
PHC1-201ENST00000433083 ZNF830Q96NB3 372 aaPredicted RBP12.79□□□□□ -0.36
PHC1-201ENST00000433083 PLA2R1Q13018 1463 aa12.79□□□□□ -0.36
PHC1-201ENST00000433083 ATP2B4P23634 1241 aa12.79□□□□□ -0.36
PHC1-201ENST00000433083 STX1AQ16623 288 aa12.79□□□□□ -0.36
PHC1-201ENST00000433083 RUFY3Q7L099 469 aa12.79□□□□□ -0.36
PHC1-201ENST00000433083 TRERF1Q96PN7 1200 aa12.79□□□□□ -0.36
PHC1-201ENST00000433083 TMOD4Q9NZQ9 345 aa12.79□□□□□ -0.36
PHC1-201ENST00000433083 SYKP43405 635 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 TMEM87AQ8NBN3 555 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 SAP30BPQ9UHR5 308 aaKnown RBP12.78□□□□□ -0.36
PHC1-201ENST00000433083 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 POLR3GO15318 223 aaPredicted RBP12.78□□□□□ -0.36
PHC1-201ENST00000433083 JAKMIP3Q5VZ66 844 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 TTLL7Q6ZT98 887 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 USP37Q86T82 979 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 GBP3Q9H0R5 595 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 ARMT1Q9H993 441 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 EXOC1Q9NV70 894 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 NEBLO76041 1014 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 TOP1P11387 765 aaKnown RBP12.78□□□□□ -0.36
PHC1-201ENST00000433083 C2CD5Q86YS7 1000 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 PAXBP1Q9Y5B6 917 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 KRT2P35908 639 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 ASAP1Q9ULH1 1129 aa12.78□□□□□ -0.36
PHC1-201ENST00000433083 PNMA6EA0A0J9YXQ4 647 aa12.77□□□□□ -0.36
PHC1-201ENST00000433083 GPAA1O43292 621 aa12.77□□□□□ -0.36
PHC1-201ENST00000433083 TRIM37O94972 964 aa12.77□□□□□ -0.36
PHC1-201ENST00000433083 ZNF165P49910 485 aa12.77□□□□□ -0.36
PHC1-201ENST00000433083 DLGAP5Q15398 846 aa12.77□□□□□ -0.36
PHC1-201ENST00000433083 USPL1Q5W0Q7 1092 aa12.77□□□□□ -0.36
PHC1-201ENST00000433083 H7C1D1 291 aa12.77□□□□□ -0.37
PHC1-201ENST00000433083 GTF2F1P35269 517 aaKnown RBP eCLIP12.77□□□□□ -0.37
PHC1-201ENST00000433083 STAT6P42226 847 aa12.77□□□□□ -0.37
PHC1-201ENST00000433083 APOBRQ0VD83 1088 aa12.77□□□□□ -0.37
PHC1-201ENST00000433083 SSR1P43307 286 aaKnown RBP12.77□□□□□ -0.37
PHC1-201ENST00000433083 TCERG1LQ5VWI1 586 aa12.77□□□□□ -0.37
PHC1-201ENST00000433083 MSL1Q68DK7 614 aa12.77□□□□□ -0.37
PHC1-201ENST00000433083 CDC42BPAQ5VT25 1732 aa12.77□□□□□ -0.37
PHC1-201ENST00000433083 GOLGA6L10A6NI86 522 aa12.77□□□□□ -0.37
PHC1-201ENST00000433083 AK2P54819 239 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 GSDMDP57764 484 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 KRT79Q5XKE5 535 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 CHST3Q7LGC8 479 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 BICD1Q96G01 975 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 GLT8D2Q9H1C3 349 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 BCS1LQ9Y276 419 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 RNF123Q5XPI4 1314 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 IQGAP3Q86VI3 1631 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 FAM193AP78312 1265 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 BMS1Q14692 1282 aaKnown RBP12.76□□□□□ -0.37
PHC1-201ENST00000433083 CCDC174Q6PII3 467 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 KRT222Q8N1A0 295 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 CCDC94Q9BW85 323 aaPredicted RBP12.76□□□□□ -0.37
PHC1-201ENST00000433083 GIMAP6Q6P9H5 292 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 GIGYF2Q6Y7W6 1299 aaKnown RBP12.76□□□□□ -0.37
PHC1-201ENST00000433083 VTI1AQ96AJ9 217 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 AATFQ9NY61 560 aaKnown RBP eCLIP12.76□□□□□ -0.37
PHC1-201ENST00000433083 YEATS4O95619 227 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 ATP5JP18859 108 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 TNFAIP1Q13829 316 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 CEP135Q66GS9 1140 aa12.76□□□□□ -0.37
PHC1-201ENST00000433083 TMC4Q7Z404 712 aa12.75□□□□□ -0.37
PHC1-201ENST00000433083 GTPBP4Q9BZE4 634 aaKnown RBP12.75□□□□□ -0.37
PHC1-201ENST00000433083 USP44Q9H0E7 712 aa12.75□□□□□ -0.37
PHC1-201ENST00000433083 TTC12Q9H892 705 aaPredicted RBP12.75□□□□□ -0.37
PHC1-201ENST00000433083 ABCC4O15439 1325 aa12.75□□□□□ -0.37
PHC1-201ENST00000433083 BEND3Q5T5X7 828 aa12.75□□□□□ -0.37
PHC1-201ENST00000433083 BRAPQ7Z569 592 aa12.75□□□□□ -0.37
PHC1-201ENST00000433083 SEPT12Q8IYM1 358 aa12.75□□□□□ -0.37
PHC1-201ENST00000433083 MRPS27Q92552 414 aaKnown RBP12.75□□□□□ -0.37
PHC1-201ENST00000433083 TIGD1Q96MW7 591 aa12.75□□□□□ -0.37
PHC1-201ENST00000433083 IBTKQ9P2D0 1353 aaPredicted RBP12.75□□□□□ -0.37
PHC1-201ENST00000433083 ADGRL3Q9HAR2 1447 aa12.75□□□□□ -0.37
PHC1-201ENST00000433083 BIN1O00499 593 aa12.75□□□□□ -0.37
PHC1-201ENST00000433083 PTPDC1A2A3K4 754 aa12.74□□□□□ -0.37
PHC1-201ENST00000433083 GPR162Q16538 588 aa12.74□□□□□ -0.37
PHC1-201ENST00000433083 DPY19L2Q6NUT2 758 aa12.74□□□□□ -0.37
PHC1-201ENST00000433083 SSH3Q8TE77 659 aa12.74□□□□□ -0.37
PHC1-201ENST00000433083 TEKT1Q969V4 418 aa12.74□□□□□ -0.37
PHC1-201ENST00000433083 USP26Q9BXU7 913 aa12.74□□□□□ -0.37
PHC1-201ENST00000433083 ZAP70P43403 619 aa12.74□□□□□ -0.37
PHC1-201ENST00000433083 PPP2R5BQ15173 497 aa12.74□□□□□ -0.37
PHC1-201ENST00000433083 INTS4Q96HW7 963 aaKnown RBP12.74□□□□□ -0.37
PHC1-201ENST00000433083 CRACR2AQ9BSW2 395 aa12.74□□□□□ -0.37
PHC1-201ENST00000433083 B4E1Z4 1266 aa12.74□□□□□ -0.37
PHC1-201ENST00000433083 MFSD14BQ5SR56 506 aa12.74□□□□□ -0.37
PHC1-201ENST00000433083 NUP88Q99567 741 aaPredicted RBP12.74□□□□□ -0.37
PHC1-201ENST00000433083 F13A1P00488 732 aa12.74□□□□□ -0.37
PHC1-201ENST00000433083 GTF2IP78347 998 aa12.74□□□□□ -0.37
PHC1-201ENST00000433083 SNW1Q13573 536 aaKnown RBP12.74□□□□□ -0.37
PHC1-201ENST00000433083 ABCA9Q8IUA7 1624 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms