RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 GAS2O43903 313 aaKnown RBP6.23□□□□□ -1.41
CLK1-204ENST00000432425 B3GALT4O96024 378 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 FCGRTP55899 365 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 ATP2B2Q01814 1243 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 FMR1Q06787 632 aaKnown RBP eCLIP6.23□□□□□ -1.41
CLK1-204ENST00000432425 HP1BP3Q5SSJ5 553 aaPredicted RBP6.23□□□□□ -1.41
CLK1-204ENST00000432425 PI16Q6UXB8 463 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 DTHD1Q6ZMT9 781 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 ARMC10Q8N2F6 343 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 ZFYVE1Q9HBF4 777 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 PREPP48147 710 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 POU4F3Q15319 338 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.23□□□□□ -1.41
CLK1-204ENST00000432425 RPS26P11Q5JNZ5 115 aaPredicted RBP6.23□□□□□ -1.41
CLK1-204ENST00000432425 EXOSC6Q5RKV6 272 aaKnown RBP6.23□□□□□ -1.41
CLK1-204ENST00000432425 MYRFLQ96LU7 910 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 TMPRSS13Q9BYE2 586 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 BCO2Q9BYV7 579 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 STOML1Q9UBI4 398 aa6.23□□□□□ -1.41
CLK1-204ENST00000432425 FSTP19883 344 aa6.22□□□□□ -1.41
CLK1-204ENST00000432425 MAOBP27338 520 aa6.22□□□□□ -1.41
CLK1-204ENST00000432425 ALG1LQ6GMV1 187 aa6.22□□□□□ -1.41
CLK1-204ENST00000432425 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.22□□□□□ -1.41
CLK1-204ENST00000432425 SND1Q7KZF4 910 aaKnown RBP eCLIP6.22□□□□□ -1.41
CLK1-204ENST00000432425 C12orf50Q8NA57 414 aaPredicted RBP6.22□□□□□ -1.41
CLK1-204ENST00000432425 GLIS3Q8NEA6 775 aa6.22□□□□□ -1.41
CLK1-204ENST00000432425 FBF1Q8TES7 1133 aa6.22□□□□□ -1.41
CLK1-204ENST00000432425 CORO1BQ9BR76 489 aa6.22□□□□□ -1.41
CLK1-204ENST00000432425 GSC2O15499 205 aa6.21□□□□□ -1.42
CLK1-204ENST00000432425 AP3B2Q13367 1082 aa6.21□□□□□ -1.42
CLK1-204ENST00000432425 SMG8Q8ND04 991 aaKnown RBP6.21□□□□□ -1.42
CLK1-204ENST00000432425 NRSN2Q9GZP1 204 aa6.21□□□□□ -1.42
CLK1-204ENST00000432425 KCNF1Q9H3M0 494 aa6.21□□□□□ -1.42
CLK1-204ENST00000432425 SUGCTQ9HAC7 445 aa6.21□□□□□ -1.42
CLK1-204ENST00000432425 HIF3AQ9Y2N7 669 aa6.21□□□□□ -1.42
CLK1-204ENST00000432425 SCO2A0A1W2PP80 73 aa6.2□□□□□ -1.42
CLK1-204ENST00000432425 DLGAP3O95886 979 aa6.2□□□□□ -1.42
CLK1-204ENST00000432425 BMP3P12645 472 aa6.2□□□□□ -1.42
CLK1-204ENST00000432425 XRCC5P13010 732 aaKnown RBP6.2□□□□□ -1.42
CLK1-204ENST00000432425 SLC51AQ86UW1 340 aa6.2□□□□□ -1.42
CLK1-204ENST00000432425 FAM20CQ8IXL6 584 aa6.2□□□□□ -1.42
CLK1-204ENST00000432425 TRIM56Q9BRZ2 755 aaKnown RBP6.2□□□□□ -1.42
CLK1-204ENST00000432425 GPN3Q9UHW5 284 aaPredicted RBP6.2□□□□□ -1.42
CLK1-204ENST00000432425 ZNF157P51786 506 aaPredicted RBP6.2□□□□□ -1.42
CLK1-204ENST00000432425 PDE3AQ14432 1141 aa6.2□□□□□ -1.42
CLK1-204ENST00000432425 NXPE4Q6UWF7 544 aa6.2□□□□□ -1.42
CLK1-204ENST00000432425 RAD18Q9NS91 495 aa6.2□□□□□ -1.42
CLK1-204ENST00000432425 TIAF1O95411 115 aa6.19□□□□□ -1.42
CLK1-204ENST00000432425 IGLV1-40P01703 118 aa6.19□□□□□ -1.42
CLK1-204ENST00000432425 RXRBP28702 533 aa6.19□□□□□ -1.42
CLK1-204ENST00000432425 PPP2R3AQ06190 1150 aa6.19□□□□□ -1.42
CLK1-204ENST00000432425 FAAP100Q0VG06 881 aa6.19□□□□□ -1.42
CLK1-204ENST00000432425 BEND4Q6ZU67 534 aa6.19□□□□□ -1.42
CLK1-204ENST00000432425 CLEC10AQ8IUN9 316 aa6.19□□□□□ -1.42
CLK1-204ENST00000432425 C7orf69Q9H7B7 122 aa6.19□□□□□ -1.42
CLK1-204ENST00000432425 AKAP2Q9Y2D5 859 aa6.19□□□□□ -1.42
CLK1-204ENST00000432425 P4HBP07237 508 aaKnown RBP6.18□□□□□ -1.42
CLK1-204ENST00000432425 CTSBP07858 339 aa6.18□□□□□ -1.42
CLK1-204ENST00000432425 USP11P51784 963 aa6.18□□□□□ -1.42
CLK1-204ENST00000432425 HNRNPUQ00839 825 aaKnown RBP eCLIP6.18□□□□□ -1.42
CLK1-204ENST00000432425 TRIM42Q8IWZ5 723 aa6.18□□□□□ -1.42
CLK1-204ENST00000432425 SETDB2Q96T68 719 aa6.18□□□□□ -1.42
CLK1-204ENST00000432425 SRCIN1Q9C0H9 1055 aa6.18□□□□□ -1.42
CLK1-204ENST00000432425 WWC3Q9ULE0 1092 aa6.18□□□□□ -1.42
CLK1-204ENST00000432425 SPG7Q9UQ90 795 aa6.18□□□□□ -1.42
CLK1-204ENST00000432425 GIPC1O14908 333 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 LDHBP07195 334 aaKnown RBP6.17□□□□□ -1.42
CLK1-204ENST00000432425 DRD2P14416 443 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 GSTT1P30711 240 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 SOX4Q06945 474 aaPredicted RBP6.17□□□□□ -1.42
CLK1-204ENST00000432425 SGO2Q562F6 1265 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 AKAP4Q5JQC9 854 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 Q8N3U1 123 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 FAM83CQ9BQN1 747 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 YIPF2Q9BWQ6 316 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 TMEM39AQ9NV64 488 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 HMX2A2RU54 273 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 ECEL1O95672 775 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 ADH5P11766 374 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 MAP4P27816 1152 aaKnown RBP6.17□□□□□ -1.42
CLK1-204ENST00000432425 NFIAQ12857 509 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 RNF112Q9ULX5 631 aa6.17□□□□□ -1.42
CLK1-204ENST00000432425 FGD1P98174 961 aa6.16□□□□□ -1.42
CLK1-204ENST00000432425 RNF43Q68DV7 783 aa6.16□□□□□ -1.42
CLK1-204ENST00000432425 C2CD4AQ8NCU7 369 aaPredicted RBP6.16□□□□□ -1.42
CLK1-204ENST00000432425 DBNDD2Q9BQY9 259 aa6.16□□□□□ -1.42
CLK1-204ENST00000432425 AP4E1Q9UPM8 1137 aa6.16□□□□□ -1.42
CLK1-204ENST00000432425 ANKRD33BA6NCL7 494 aa6.15□□□□□ -1.42
CLK1-204ENST00000432425 AOC2O75106 756 aa6.15□□□□□ -1.42
CLK1-204ENST00000432425 OSBPL7Q9BZF2 842 aa6.15□□□□□ -1.42
CLK1-204ENST00000432425 ZC3H12CQ9C0D7 883 aaKnown RBP6.15□□□□□ -1.42
CLK1-204ENST00000432425 GSTP1P09211 210 aaKnown RBP6.14□□□□□ -1.43
CLK1-204ENST00000432425 LRP8Q14114 963 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 COL19A1Q14993 1142 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 NFKBIBQ15653 356 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 PAOXQ6QHF9 649 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 DYMQ7RTS9 669 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 C3orf58Q8NDZ4 430 aa6.14□□□□□ -1.43
CLK1-204ENST00000432425 FBLIM1Q8WUP2 373 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms