RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 SMC1AQ14683 1233 aaKnown RBP12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 ANKRD20A12PQ8NF67 263 aa12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 WASF1Q92558 559 aa12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 GBP3Q9H0R5 595 aa12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 ST7Q9NRC1 585 aa12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 CWC25Q9NXE8 425 aaPredicted RBP12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 PPP2R2CQ9Y2T4 447 aa12.36□□□□□ -0.43
ATP2C1-204ENST00000428331 OAS2P29728 719 aaKnown RBP12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 PIP4K2AP48426 406 aaPredicted RBP12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 SLC39A14Q15043 492 aa12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 KIF4BQ2VIQ3 1234 aa12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 HSP90AA4PQ58FG1 418 aa12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 TTLL5Q6EMB2 1281 aa12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 NBPF11Q86T75 865 aa12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 TRIM22Q8IYM9 498 aa12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 CCDC175P0C221 793 aa12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 ATP1A3P13637 1013 aa12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 CYP2C19P33261 490 aa12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 AKAP17AQ02040 695 aaKnown RBP12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 ATP2B1P20020 1258 aa12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 IFNL2Q8IZJ0 200 aa12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 ZSWIM4Q9H7M6 989 aa12.35□□□□□ -0.43
ATP2C1-204ENST00000428331 HNRNPH2P55795 449 aaKnown RBP12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 A0A1B0GUL7 405 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 TUBB4BP68371 445 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 SLC52A2Q9HAB3 445 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 KCNH3Q9ULD8 1083 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 RGPD1P0DJD0 1748 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 EYA2O00167 538 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 CUTAO60888 179 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 KRBA2Q6ZNG9 492 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 VSTM4Q8IW00 320 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 ZNF496Q96IT1 587 aaPredicted RBP12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 GPR108Q9NPR9 543 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 FANCLQ9NW38 375 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 TBC1D2BQ9UPU7 963 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 STX10O60499 249 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 TSR1Q2NL82 804 aaKnown RBP12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 MICU3Q86XE3 530 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 MAST3O60307 1309 aa12.34□□□□□ -0.43
ATP2C1-204ENST00000428331 CHGBP05060 677 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 PNOCQ13519 176 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 VPS37DQ86XT2 251 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 NUTM2AQ8IVF1 878 aaPredicted RBP12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 CEP112Q8N8E3 955 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 NEK11Q8NG66 645 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 PLBD2Q8NHP8 589 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 RABGGTAQ92696 567 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 ERICH2A1L162 156 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 GOLGA8AA7E2F4 631 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 TADA3O75528 432 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 SEC31AO94979 1220 aaKnown RBP12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 ZC3H6P61129 1189 aaKnown RBP12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 KIF23Q02241 960 aaPredicted RBP12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 SART3Q15020 963 aaKnown RBP12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 KARSQ15046 597 aaKnown RBP12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 SPECC1LQ69YQ0 1117 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 FHOD1Q9Y613 1164 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 CCDC191Q8NCU4 936 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 CEP131Q9UPN4 1083 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 ZBTB43O43298 467 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 MCM6Q14566 821 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 KRT40Q6A162 431 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 KRI1Q8N9T8 703 aaKnown RBP12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 AGXT2Q9BYV1 514 aa12.33□□□□□ -0.44
ATP2C1-204ENST00000428331 PPP6R2O75170 966 aa12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 SSRP1Q08945 709 aaKnown RBP12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 MLKLQ8NB16 471 aa12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 ANGEL1Q9UNK9 670 aaKnown RBP12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 NFE2L3Q9Y4A8 694 aa12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 SETD1BQ9UPS6 1966 aaKnown RBP12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 DIP2BQ9P265 1576 aa12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 ZSCAN26Q16670 478 aa12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 CCDC102AQ96A19 550 aa12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 ZNF446Q9NWS9 450 aa12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 NRXN3Q9Y4C0 1643 aa12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 BRD3Q15059 726 aa12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 CPLX3Q8WVH0 158 aa12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 APPBP2Q92624 585 aa12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 RBM33Q96EV2 1170 aaKnown RBP12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 JCADQ9P266 1359 aa12.32□□□□□ -0.44
ATP2C1-204ENST00000428331 XBP1P17861 261 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 CCDC93Q567U6 631 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 PCDHA5Q9Y5H7 936 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 FGAP02671 866 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 FDPSP14324 419 aaKnown RBP12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 CHMP4BP1P59074 171 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 RABL6Q3YEC7 729 aaPredicted RBP12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 IVLP07476 585 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 ARHGEF25Q86VW2 580 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 SLC12A7Q9Y666 1083 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 PALLDQ8WX93 1383 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 SLIT1O75093 1534 aa12.31□□□□□ -0.44
ATP2C1-204ENST00000428331 AKR1B15C9JRZ8 316 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms