RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 ZNF213O14771 459 aa15.12■□□□□ 0.01
COL12A1-205ENST00000425443 EXOSC10Q01780 885 aaKnown RBP15.12■□□□□ 0.01
COL12A1-205ENST00000425443 TRDNQ13061 729 aa15.12■□□□□ 0.01
COL12A1-205ENST00000425443 DZIP3Q86Y13 1208 aaKnown RBP15.12■□□□□ 0.01
COL12A1-205ENST00000425443 TTLL11Q8NHH1 800 aa15.12■□□□□ 0.01
COL12A1-205ENST00000425443 APPBP2Q92624 585 aa15.12■□□□□ 0.01
COL12A1-205ENST00000425443 GOLGA6L19H0YKK7 550 aa15.12■□□□□ 0.01
COL12A1-205ENST00000425443 CPLX1O14810 134 aa15.12■□□□□ 0.01
COL12A1-205ENST00000425443 FGAP02671 866 aa15.12■□□□□ 0.01
COL12A1-205ENST00000425443 CSF1RP07333 972 aa15.12■□□□□ 0.01
COL12A1-205ENST00000425443 PSEN1P49768 467 aa15.12■□□□□ 0.01
COL12A1-205ENST00000425443 CTSWP56202 376 aa15.12■□□□□ 0.01
COL12A1-205ENST00000425443 SLC9C2Q5TAH2 1124 aa15.12■□□□□ 0.01
COL12A1-205ENST00000425443 DHX40Q8IX18 779 aaKnown RBP15.12■□□□□ 0.01
COL12A1-205ENST00000425443 PDIA3P30101 505 aaKnown RBP15.11■□□□□ 0.01
COL12A1-205ENST00000425443 FILIP1Q7Z7B0 1213 aa15.11■□□□□ 0.01
COL12A1-205ENST00000425443 PDCL2Q8N4E4 241 aa15.11■□□□□ 0.01
COL12A1-205ENST00000425443 PUS7LQ9H0K6 701 aaKnown RBP15.11■□□□□ 0.01
COL12A1-205ENST00000425443 NUP188Q5SRE5 1749 aa15.11■□□□□ 0.01
COL12A1-205ENST00000425443 UBR2Q8IWV8 1755 aa15.11■□□□□ 0.01
COL12A1-205ENST00000425443 GPAA1O43292 621 aa15.11■□□□□ 0.01
COL12A1-205ENST00000425443 RXRAP19793 462 aa15.11■□□□□ 0.01
COL12A1-205ENST00000425443 CHAF1AQ13111 956 aaPredicted RBP15.11■□□□□ 0.01
COL12A1-205ENST00000425443 PLA2G12BQ9BX93 195 aa15.11■□□□□ 0.01
COL12A1-205ENST00000425443 RCOR1Q9UKL0 485 aa15.11■□□□□ 0.01
COL12A1-205ENST00000425443 SALL1Q9NSC2 1324 aa15.11■□□□□ 0.01
COL12A1-205ENST00000425443 BECN2A8MW95 431 aa15.1■□□□□ 0.01
COL12A1-205ENST00000425443 PRC1O43663 620 aa15.1■□□□□ 0.01
COL12A1-205ENST00000425443 CYP19A1P11511 503 aaPredicted RBP15.1■□□□□ 0.01
COL12A1-205ENST00000425443 ENGASEQ8NFI3 743 aa15.1■□□□□ 0.01
COL12A1-205ENST00000425443 HELBQ8NG08 1087 aaPredicted RBP15.1■□□□□ 0.01
COL12A1-205ENST00000425443 ZNF274Q96GC6 653 aaPredicted RBP15.1■□□□□ 0.01
COL12A1-205ENST00000425443 TNNT1P13805 278 aa15.1■□□□□ 0.01
COL12A1-205ENST00000425443 FDPSP14324 419 aaKnown RBP15.1■□□□□ 0.01
COL12A1-205ENST00000425443 SF3A1Q15459 793 aaKnown RBP15.1■□□□□ 0.01
COL12A1-205ENST00000425443 CCDC73Q6ZRK6 1079 aa15.1■□□□□ 0.01
COL12A1-205ENST00000425443 STK11IPQ8N1F8 1099 aa15.1■□□□□ 0.01
COL12A1-205ENST00000425443 NCOA7Q8NI08 942 aa15.1■□□□□ 0.01
COL12A1-205ENST00000425443 ZNF396Q96N95 335 aaPredicted RBP15.1■□□□□ 0.01
COL12A1-205ENST00000425443 DHX16O60231 1041 aaKnown RBP15.1■□□□□ 0.01
COL12A1-205ENST00000425443 ISM2Q6H9L7 571 aa15.1■□□□□ 0.01
COL12A1-205ENST00000425443 NAA16Q6N069 864 aaPredicted RBP15.1■□□□□ 0.01
COL12A1-205ENST00000425443 LRRC8AQ8IWT6 810 aa15.1■□□□□ 0.01
COL12A1-205ENST00000425443 FSIP1Q8NA03 581 aa15.1■□□□□ 0.01
COL12A1-205ENST00000425443 GTPBP4Q9BZE4 634 aaKnown RBP15.1■□□□□ 0.01
COL12A1-205ENST00000425443 RIPOR2Q9Y4F9 1068 aa15.1■□□□□ 0.01
COL12A1-205ENST00000425443 TJP1Q07157 1748 aa15.09■□□□□ 0.01
COL12A1-205ENST00000425443 KLF18A0A0U1RQI7 1052 aa15.09■□□□□ 0.01
COL12A1-205ENST00000425443 A0A1B0GVL5 298 aa15.09■□□□□ 0.01
COL12A1-205ENST00000425443 GOLGA8BA8MQT2 603 aa15.09■□□□□ 0.01
COL12A1-205ENST00000425443 BIN1O00499 593 aa15.09■□□□□ 0.01
COL12A1-205ENST00000425443 FOXP2O15409 715 aa15.09■□□□□ 0.01
COL12A1-205ENST00000425443 KINO60870 393 aaKnown RBP15.09■□□□□ 0.01
COL12A1-205ENST00000425443 MCAMP43121 646 aa15.09■□□□□ 0.01
COL12A1-205ENST00000425443 PDE8AO60658 829 aa15.09■□□□□ 0.01
COL12A1-205ENST00000425443 TTF1Q15361 905 aaPredicted RBP15.09■□□□□ 0.01
COL12A1-205ENST00000425443 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.09■□□□□ 0.01
COL12A1-205ENST00000425443 SDF4Q9BRK5 362 aa15.09■□□□□ 0.01
COL12A1-205ENST00000425443 CDHR2Q9BYE9 1310 aa15.08■□□□□ 0.01
COL12A1-205ENST00000425443 AGXT2Q9BYV1 514 aa15.08■□□□□ 0.01
COL12A1-205ENST00000425443 DENND2AQ9ULE3 1009 aa15.08■□□□□ 0.01
COL12A1-205ENST00000425443 NWD2Q9ULI1 1742 aa15.08■□□□□ 0
COL12A1-205ENST00000425443 NKX2-3Q8TAU0 364 aa15.08■□□□□ 0
COL12A1-205ENST00000425443 MPHOSPH8Q99549 860 aa15.08■□□□□ 0
COL12A1-205ENST00000425443 ZNF526Q8TF50 670 aaPredicted RBP15.08■□□□□ 0
COL12A1-205ENST00000425443 SLC4A9Q96Q91 983 aa15.08■□□□□ 0
COL12A1-205ENST00000425443 PDE8BO95263 885 aa15.07■□□□□ 0
COL12A1-205ENST00000425443 ADAMTS2O95450 1211 aa15.07■□□□□ 0
COL12A1-205ENST00000425443 MMP14P50281 582 aa15.07■□□□□ 0
COL12A1-205ENST00000425443 TPD52L1Q16890 204 aaPredicted RBP15.07■□□□□ 0
COL12A1-205ENST00000425443 NEDD4P46934 1319 aa15.07■□□□□ 0
COL12A1-205ENST00000425443 ACSBG1Q96GR2 724 aa15.07■□□□□ 0
COL12A1-205ENST00000425443 C8orf76Q96K31 380 aa15.07■□□□□ 0
COL12A1-205ENST00000425443 PCDHA7Q9UN72 937 aa15.07■□□□□ 0
COL12A1-205ENST00000425443 CARMIL3Q8ND23 1372 aa15.07■□□□□ 0
COL12A1-205ENST00000425443 STX1AQ16623 288 aa15.06■□□□□ 0
COL12A1-205ENST00000425443 SARM1Q6SZW1 724 aa15.06■□□□□ 0
COL12A1-205ENST00000425443 AOPEPQ8N6M6 819 aa15.06■□□□□ 0
COL12A1-205ENST00000425443 AIDAQ96BJ3 306 aa15.06■□□□□ 0
COL12A1-205ENST00000425443 ORC3Q9UBD5 711 aaPredicted RBP15.06■□□□□ 0
COL12A1-205ENST00000425443 CDC25BP30305 580 aa15.06■□□□□ 0
COL12A1-205ENST00000425443 PHKA1P46020 1223 aa15.06■□□□□ 0
COL12A1-205ENST00000425443 CCZ1BP86790 482 aa15.06■□□□□ 0
COL12A1-205ENST00000425443 CCZ1P86791 482 aaPredicted RBP15.06■□□□□ 0
COL12A1-205ENST00000425443 CCDC102BQ68D86 513 aa15.06■□□□□ 0
COL12A1-205ENST00000425443 NBPF11Q86T75 865 aa15.06■□□□□ 0
COL12A1-205ENST00000425443 ZNF622Q969S3 477 aaKnown RBP eCLIP15.06■□□□□ 0
COL12A1-205ENST00000425443 TRMT1Q9NXH9 659 aaKnown RBP15.06■□□□□ 0
COL12A1-205ENST00000425443 CLIC4Q9Y696 253 aa15.06■□□□□ 0
COL12A1-205ENST00000425443 SMTNL1A8MU46 457 aa15.06■□□□□ 0
COL12A1-205ENST00000425443 ZRSR1Q15695 479 aaKnown RBP15.06■□□□□ 0
COL12A1-205ENST00000425443 PAPPAQ13219 1627 aa15.05■□□□□ 0
COL12A1-205ENST00000425443 IL6STP40189 918 aaPredicted RBP15.05■□□□□ -0
COL12A1-205ENST00000425443 NDUFA8P51970 172 aa15.05■□□□□ -0
COL12A1-205ENST00000425443 STK38Q15208 465 aa15.05■□□□□ -0
COL12A1-205ENST00000425443 FMR1NBQ8N0W7 255 aaPredicted RBP15.05■□□□□ -0
COL12A1-205ENST00000425443 AIFM3Q96NN9 605 aa15.05■□□□□ -0
COL12A1-205ENST00000425443 TRIM34Q9BYJ4 488 aa15.05■□□□□ -0
COL12A1-205ENST00000425443 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.05■□□□□ -0
COL12A1-205ENST00000425443 V9GYY5 206 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms