RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 HMGN5P82970 282 aaKnown RBP10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 SCRN1Q12765 414 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 MAGEB6Q8N7X4 407 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 CNBD1Q8NA66 436 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 RGS22Q8NE09 1264 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 NSUN7Q8NE18 718 aaKnown RBP10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 NCOA7Q8NI08 942 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 GPT2Q8TD30 523 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 AIDAQ96BJ3 306 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 NAV1Q8NEY1 1877 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 FOCADQ5VW36 1801 aa10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 DDX60LQ5H9U9 1706 aaKnown RBP10.7□□□□□ -0.7
LINCMD1-201ENST00000418518 GOLGA6L3A6NEY3 463 aa10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 ZNF213O14771 459 aa10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 PLSCR1O15162 318 aa10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 PRPF40AO75400 957 aaKnown RBP10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 MBD4O95243 580 aa10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 GRAPQ13588 217 aa10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 CAVIN4Q5BKX8 364 aa10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 FOXD4L5Q5VV16 416 aaPredicted RBP10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 ZNF772Q68DY9 489 aaPredicted RBP10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 PRR5LQ6MZQ0 368 aa10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 TBC1D10CQ8IV04 446 aa10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 KLHL34Q8N239 644 aa10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 GRAPLQ8TC17 118 aaPredicted RBP10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 FOXD4L4Q8WXT5 416 aaPredicted RBP10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 MTA3Q9BTC8 594 aa10.69□□□□□ -0.7
LINCMD1-201ENST00000418518 KLRG2A4D1S0 409 aaPredicted RBP10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 GSG1L2A8MUP6 293 aa10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 PRC1O43663 620 aa10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 CTDNEP1O95476 244 aa10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 PDIA3P30101 505 aaKnown RBP10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 GYG1P46976 350 aa10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 MRE11P49959 708 aa10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 HAND2P61296 217 aa10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 APOBRQ0VD83 1088 aa10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 LARP1BQ659C4 914 aaKnown RBP10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 RALYLQ86SE5 291 aaKnown RBP10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 IFNL3Q8IZI9 196 aa10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 CHAMP1Q96JM3 812 aa10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 LRRC2Q9BYS8 371 aa10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 GZF1Q9H116 711 aaPredicted RBP10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 LEMD3Q9Y2U8 911 aa10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 KIF3AQ9Y496 699 aa10.68□□□□□ -0.7
LINCMD1-201ENST00000418518 ELP1O95163 1332 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 XDHP47989 1333 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 JAK2O60674 1132 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 PHF14O94880 888 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 HOXA10P31260 410 aaPredicted RBP10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 FGD1P98174 961 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 STK3Q13188 491 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 TXNRD1Q16881 649 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 CSPP1Q1MSJ5 1256 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 NAA16Q6N069 864 aaPredicted RBP10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 CDC37L1Q7L3B6 337 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 PROM2Q8N271 834 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 LCORLQ8N3X6 602 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 STAG1Q8WVM7 1258 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 TMEM87BQ96K49 555 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 RIOK1Q9BRS2 568 aaKnown RBP10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 ARMT1Q9H993 441 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 LRP2BPQ9P2M1 347 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 ANAPC4Q9UJX5 808 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 HPS5Q9UPZ3 1129 aa10.67□□□□□ -0.7
LINCMD1-201ENST00000418518 NEDD4P46934 1319 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 PTPDC1A2A3K4 754 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 VPS37CA5D8V6 355 aaPredicted RBP10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 WTIPA6NIX2 430 aaPredicted RBP10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 POLRMTO00411 1230 aaKnown RBP10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 SH2B2O14492 632 aaPredicted RBP10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 TRIM37O94972 964 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 CYP7A1P22680 504 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 KLRK1P26718 216 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 HIBADHP31937 336 aaKnown RBP10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 UBE2HP62256 183 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 ST5P78524 1137 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 TRDNQ13061 729 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 RESTQ13127 1097 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 ZSCAN23Q3MJ62 389 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 GIMAP6Q6P9H5 292 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 USP48Q86UV5 1035 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 SGMS1Q86VZ5 419 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 GAS2L3Q86XJ1 694 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 ZNF384Q8TF68 577 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 AKT1S1Q96B36 256 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 NACAP1Q9BZK3 213 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 NAPBQ9H115 298 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 CNNM2Q9H8M5 875 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 TMEM63CQ9P1W3 806 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 ANGEL1Q9UNK9 670 aaKnown RBP10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 CNPY2Q9Y2B0 182 aa10.66□□□□□ -0.7
LINCMD1-201ENST00000418518 ZNF646O15015 1829 aaPredicted RBP10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 SERPINB2P05120 415 aa10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 XRCC6P12956 609 aaKnown RBP eCLIP10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 LIFRP42702 1097 aa10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 RCAN1P53805 252 aa10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 DDR1Q08345 913 aa10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 AKNAD1Q5T1N1 836 aa10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 CAVIN1Q6NZI2 390 aaKnown RBP10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 CYB5R4Q7L1T6 521 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms