RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 NPATQ14207 1427 aa20.7■□□□□ 0.9
HCG11-201ENST00000411553 NOLC1Q14978 699 aaKnown RBP eCLIP20.7■□□□□ 0.9
HCG11-201ENST00000411553 SAP30BPQ9UHR5 308 aaKnown RBP20.7■□□□□ 0.9
HCG11-201ENST00000411553 SV2BQ7L1I2 683 aa20.69■□□□□ 0.9
HCG11-201ENST00000411553 TXNDC16Q9P2K2 825 aa20.69■□□□□ 0.9
HCG11-201ENST00000411553 SOS1Q07889 1333 aaPredicted RBP20.69■□□□□ 0.9
HCG11-201ENST00000411553 CCDC117Q8IWD4 279 aaPredicted RBP20.69■□□□□ 0.9
HCG11-201ENST00000411553 EYA1Q99502 592 aa20.69■□□□□ 0.9
HCG11-201ENST00000411553 VAMP4O75379 141 aa20.69■□□□□ 0.9
HCG11-201ENST00000411553 ZKSCAN3Q9BRR0 538 aa20.69■□□□□ 0.9
HCG11-201ENST00000411553 FRMD4BQ9Y2L6 1034 aa20.69■□□□□ 0.9
HCG11-201ENST00000411553 UFL1O94874 794 aa20.69■□□□□ 0.9
HCG11-201ENST00000411553 ATP2A2P16615 1042 aaKnown RBP20.69■□□□□ 0.9
HCG11-201ENST00000411553 POLR3AO14802 1390 aaPredicted RBP20.69■□□□□ 0.9
HCG11-201ENST00000411553 DCAF17Q5H9S7 520 aaPredicted RBP20.68■□□□□ 0.9
HCG11-201ENST00000411553 GUCA1BQ9UMX6 200 aa20.68■□□□□ 0.9
HCG11-201ENST00000411553 NUP160Q12769 1436 aa20.68■□□□□ 0.9
HCG11-201ENST00000411553 MAPK8IP2Q13387 824 aaPredicted RBP20.68■□□□□ 0.9
HCG11-201ENST00000411553 CCDC129Q6ZRS4 1044 aa20.68■□□□□ 0.9
HCG11-201ENST00000411553 GJA3Q9Y6H8 435 aa20.68■□□□□ 0.9
HCG11-201ENST00000411553 TERF1P54274 439 aa20.68■□□□□ 0.9
HCG11-201ENST00000411553 MCM6Q14566 821 aa20.68■□□□□ 0.9
HCG11-201ENST00000411553 PICK1Q9NRD5 415 aa20.68■□□□□ 0.9
HCG11-201ENST00000411553 PKD2L1Q9P0L9 805 aa20.68■□□□□ 0.9
HCG11-201ENST00000411553 BIN2Q9UBW5 565 aaPredicted RBP20.68■□□□□ 0.9
HCG11-201ENST00000411553 CCDC6Q16204 474 aa20.68■□□□□ 0.9
HCG11-201ENST00000411553 LETM2Q2VYF4 491 aa20.68■□□□□ 0.9
HCG11-201ENST00000411553 PARP10Q53GL7 1025 aa20.68■□□□□ 0.9
HCG11-201ENST00000411553 TSPYL6Q8N831 410 aa20.68■□□□□ 0.9
HCG11-201ENST00000411553 GOLGA1Q92805 767 aa20.68■□□□□ 0.9
HCG11-201ENST00000411553 LUC7L2Q9Y383 392 aaKnown RBP20.68■□□□□ 0.9
HCG11-201ENST00000411553 GPATCH8Q9UKJ3 1502 aaKnown RBP20.68■□□□□ 0.9
HCG11-201ENST00000411553 HOXC9P31274 260 aa20.67■□□□□ 0.9
HCG11-201ENST00000411553 RAPGEF1Q13905 1077 aa20.67■□□□□ 0.9
HCG11-201ENST00000411553 CAPZA3Q96KX2 299 aa20.67■□□□□ 0.9
HCG11-201ENST00000411553 GPCPD1Q9NPB8 672 aa20.67■□□□□ 0.9
HCG11-201ENST00000411553 TMOD4Q9NZQ9 345 aa20.67■□□□□ 0.9
HCG11-201ENST00000411553 FAM169AQ9Y6X4 670 aa20.67■□□□□ 0.9
HCG11-201ENST00000411553 CCDC14Q49A88 953 aa20.67■□□□□ 0.9
HCG11-201ENST00000411553 ATRIPQ8WXE1 791 aa20.67■□□□□ 0.9
HCG11-201ENST00000411553 FNBP1Q96RU3 617 aa20.67■□□□□ 0.9
HCG11-201ENST00000411553 WDR44Q5JSH3 913 aa20.67■□□□□ 0.9
HCG11-201ENST00000411553 IP6K1Q92551 441 aa20.67■□□□□ 0.9
HCG11-201ENST00000411553 SMC6Q96SB8 1091 aa20.67■□□□□ 0.9
HCG11-201ENST00000411553 DDX21Q9NR30 783 aaKnown RBP eCLIP20.67■□□□□ 0.9
HCG11-201ENST00000411553 VWA3AA6NCI4 1184 aa20.66■□□□□ 0.9
HCG11-201ENST00000411553 HIBADHP31937 336 aaKnown RBP20.66■□□□□ 0.9
HCG11-201ENST00000411553 ZBTB16Q05516 673 aa20.66■□□□□ 0.9
HCG11-201ENST00000411553 MAK16Q9BXY0 300 aaKnown RBP20.66■□□□□ 0.9
HCG11-201ENST00000411553 BTG4Q9NY30 223 aa20.66■□□□□ 0.9
HCG11-201ENST00000411553 ABCC1P33527 1531 aa20.66■□□□□ 0.9
HCG11-201ENST00000411553 PLCD1P51178 756 aa20.66■□□□□ 0.9
HCG11-201ENST00000411553 KRT222Q8N1A0 295 aa20.66■□□□□ 0.9
HCG11-201ENST00000411553 SELENOSQ9BQE4 189 aa20.66■□□□□ 0.9
HCG11-201ENST00000411553 ARHGEF10LQ9HCE6 1279 aa20.66■□□□□ 0.9
HCG11-201ENST00000411553 EPB41P11171 864 aaKnown RBP20.66■□□□□ 0.9
HCG11-201ENST00000411553 PPP1R7Q15435 360 aa20.66■□□□□ 0.9
HCG11-201ENST00000411553 ZNF174Q15697 407 aa20.66■□□□□ 0.9
HCG11-201ENST00000411553 CDCA7Q9BWT1 371 aaPredicted RBP20.66■□□□□ 0.9
HCG11-201ENST00000411553 BIRC3Q13489 604 aa20.66■□□□□ 0.9
HCG11-201ENST00000411553 TRPM2O94759 1503 aa20.65■□□□□ 0.9
HCG11-201ENST00000411553 CHMLP26374 656 aa20.65■□□□□ 0.9
HCG11-201ENST00000411553 MTRF1LQ9UGC7 380 aaKnown RBP20.65■□□□□ 0.9
HCG11-201ENST00000411553 MTUS1Q9ULD2 1270 aa20.65■□□□□ 0.9
HCG11-201ENST00000411553 PPP1R2P41236 205 aa20.65■□□□□ 0.9
HCG11-201ENST00000411553 KRT24Q2M2I5 525 aa20.65■□□□□ 0.9
HCG11-201ENST00000411553 ZFYVE9O95405 1425 aa20.65■□□□□ 0.9
HCG11-201ENST00000411553 ITGA6P23229 1130 aa20.65■□□□□ 0.9
HCG11-201ENST00000411553 STK32BQ9NY57 414 aa20.65■□□□□ 0.9
HCG11-201ENST00000411553 CCNL1Q9UK58 526 aaPredicted RBP20.65■□□□□ 0.9
HCG11-201ENST00000411553 CCT6AP40227 531 aaKnown RBP20.65■□□□□ 0.9
HCG11-201ENST00000411553 SMTNP53814 917 aa20.64■□□□□ 0.9
HCG11-201ENST00000411553 PUM3Q15397 648 aaKnown RBP20.64■□□□□ 0.9
HCG11-201ENST00000411553 ATL3Q6DD88 541 aa20.64■□□□□ 0.9
HCG11-201ENST00000411553 ANKS4BQ8N8V4 417 aa20.64■□□□□ 0.9
HCG11-201ENST00000411553 FAM89AQ96GI7 184 aa20.64■□□□□ 0.9
HCG11-201ENST00000411553 THOC2Q8NI27 1593 aaKnown RBP20.64■□□□□ 0.9
HCG11-201ENST00000411553 PLBD2Q8NHP8 589 aa20.64■□□□□ 0.9
HCG11-201ENST00000411553 IFNKQ9P0W0 207 aa20.64■□□□□ 0.9
HCG11-201ENST00000411553 TRAF5O00463 557 aa20.64■□□□□ 0.89
HCG11-201ENST00000411553 KRT5P13647 590 aa20.64■□□□□ 0.89
HCG11-201ENST00000411553 TUBB4BP68371 445 aa20.64■□□□□ 0.89
HCG11-201ENST00000411553 KARSQ15046 597 aaKnown RBP20.64■□□□□ 0.89
HCG11-201ENST00000411553 LZTFL1Q9NQ48 299 aa20.64■□□□□ 0.89
HCG11-201ENST00000411553 EYA2O00167 538 aa20.64■□□□□ 0.89
HCG11-201ENST00000411553 SLU7O95391 586 aaKnown RBP20.64■□□□□ 0.89
HCG11-201ENST00000411553 HARSP12081 509 aaKnown RBP20.64■□□□□ 0.89
HCG11-201ENST00000411553 SNX16P57768 344 aa20.64■□□□□ 0.89
HCG11-201ENST00000411553 ELP1O95163 1332 aa20.64■□□□□ 0.89
HCG11-201ENST00000411553 ZNF569Q5MCW4 686 aa20.64■□□□□ 0.89
HCG11-201ENST00000411553 KIFAP3Q92845 792 aa20.64■□□□□ 0.89
HCG11-201ENST00000411553 TSGA10Q9BZW7 698 aa20.64■□□□□ 0.89
HCG11-201ENST00000411553 ASXL2Q76L83 1435 aa20.63■□□□□ 0.89
HCG11-201ENST00000411553 CCDC114Q96M63 670 aa20.63■□□□□ 0.89
HCG11-201ENST00000411553 PPP1R9BQ96SB3 815 aa20.63■□□□□ 0.89
HCG11-201ENST00000411553 MAST3O60307 1309 aa20.63■□□□□ 0.89
HCG11-201ENST00000411553 MAP7D1Q3KQU3 841 aa20.63■□□□□ 0.89
HCG11-201ENST00000411553 SEL1L2Q5TEA6 688 aa20.63■□□□□ 0.89
HCG11-201ENST00000411553 FCHSD1Q86WN1 690 aa20.63■□□□□ 0.89
HCG11-201ENST00000411553 GGA1Q9UJY5 639 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms