RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 BCL9O00512 1426 aa18.96■□□□□ 0.63
CDK11B-204ENST00000407249 STARD3NLO95772 234 aa18.96■□□□□ 0.63
CDK11B-204ENST00000407249 NAA16Q6N069 864 aaPredicted RBP18.96■□□□□ 0.63
CDK11B-204ENST00000407249 MNS1Q8NEH6 495 aa18.96■□□□□ 0.63
CDK11B-204ENST00000407249 KIF18AQ8NI77 898 aa18.96■□□□□ 0.63
CDK11B-204ENST00000407249 BECN2A8MW95 431 aa18.96■□□□□ 0.63
CDK11B-204ENST00000407249 DHX40Q8IX18 779 aaKnown RBP18.96■□□□□ 0.63
CDK11B-204ENST00000407249 FTOQ9C0B1 505 aaKnown RBP eCLIP18.96■□□□□ 0.63
CDK11B-204ENST00000407249 MED4Q9NPJ6 270 aa18.96■□□□□ 0.63
CDK11B-204ENST00000407249 DBNLQ9UJU6 430 aaKnown RBP18.96■□□□□ 0.63
CDK11B-204ENST00000407249 PHLPP1O60346 1717 aa18.95■□□□□ 0.62
CDK11B-204ENST00000407249 RFX7Q2KHR2 1363 aa18.95■□□□□ 0.62
CDK11B-204ENST00000407249 CCZ1BP86790 482 aa18.95■□□□□ 0.62
CDK11B-204ENST00000407249 CCZ1P86791 482 aaPredicted RBP18.95■□□□□ 0.62
CDK11B-204ENST00000407249 PIGBQ92521 554 aa18.95■□□□□ 0.62
CDK11B-204ENST00000407249 RASSF4Q9H2L5 321 aa18.95■□□□□ 0.62
CDK11B-204ENST00000407249 ZNF215Q9UL58 517 aaPredicted RBP18.95■□□□□ 0.62
CDK11B-204ENST00000407249 THRAP3Q9Y2W1 955 aaKnown RBP18.95■□□□□ 0.62
CDK11B-204ENST00000407249 NRAPQ86VF7 1730 aa18.95■□□□□ 0.62
CDK11B-204ENST00000407249 CCDC189A1A4V9 331 aa18.95■□□□□ 0.62
CDK11B-204ENST00000407249 CCDC69A6NI79 296 aa18.95■□□□□ 0.62
CDK11B-204ENST00000407249 PFKFB2O60825 505 aa18.95■□□□□ 0.62
CDK11B-204ENST00000407249 TRIM28Q13263 835 aaKnown RBP18.95■□□□□ 0.62
CDK11B-204ENST00000407249 ENGASEQ8NFI3 743 aa18.95■□□□□ 0.62
CDK11B-204ENST00000407249 ATG3Q9NT62 314 aa18.95■□□□□ 0.62
CDK11B-204ENST00000407249 EXOC5O00471 708 aa18.94■□□□□ 0.62
CDK11B-204ENST00000407249 CCDC129Q6ZRS4 1044 aa18.94■□□□□ 0.62
CDK11B-204ENST00000407249 FILIP1Q7Z7B0 1213 aa18.94■□□□□ 0.62
CDK11B-204ENST00000407249 NSUN7Q8NE18 718 aaKnown RBP18.94■□□□□ 0.62
CDK11B-204ENST00000407249 LRRC2Q9BYS8 371 aa18.94■□□□□ 0.62
CDK11B-204ENST00000407249 ZNF609O15014 1411 aa18.94■□□□□ 0.62
CDK11B-204ENST00000407249 CHGBP05060 677 aa18.94■□□□□ 0.62
CDK11B-204ENST00000407249 FOXO4P98177 505 aa18.94■□□□□ 0.62
CDK11B-204ENST00000407249 KIF6Q6ZMV9 814 aa18.94■□□□□ 0.62
CDK11B-204ENST00000407249 CCDC73Q6ZRK6 1079 aa18.94■□□□□ 0.62
CDK11B-204ENST00000407249 SEC62Q99442 399 aaKnown RBP18.94■□□□□ 0.62
CDK11B-204ENST00000407249 ISCA1Q9BUE6 129 aa18.94■□□□□ 0.62
CDK11B-204ENST00000407249 ANO10Q9NW15 660 aa18.94■□□□□ 0.62
CDK11B-204ENST00000407249 FAM160A1Q05DH4 1040 aa18.93■□□□□ 0.62
CDK11B-204ENST00000407249 TRERF1Q96PN7 1200 aa18.93■□□□□ 0.62
CDK11B-204ENST00000407249 USP28Q96RU2 1077 aa18.93■□□□□ 0.62
CDK11B-204ENST00000407249 GPR108Q9NPR9 543 aa18.93■□□□□ 0.62
CDK11B-204ENST00000407249 KCND1Q9NSA2 647 aa18.93■□□□□ 0.62
CDK11B-204ENST00000407249 NDUFB9Q9Y6M9 179 aa18.93■□□□□ 0.62
CDK11B-204ENST00000407249 KINO60870 393 aaKnown RBP18.93■□□□□ 0.62
CDK11B-204ENST00000407249 CTDNEP1O95476 244 aa18.93■□□□□ 0.62
CDK11B-204ENST00000407249 KMT5BQ4FZB7 885 aa18.93■□□□□ 0.62
CDK11B-204ENST00000407249 MCMDC2Q4G0Z9 681 aa18.93■□□□□ 0.62
CDK11B-204ENST00000407249 TNNI3KQ59H18 835 aa18.93■□□□□ 0.62
CDK11B-204ENST00000407249 DNAJC21Q5F1R6 531 aaKnown RBP18.93■□□□□ 0.62
CDK11B-204ENST00000407249 CCAR2Q8N163 923 aaKnown RBP18.93■□□□□ 0.62
CDK11B-204ENST00000407249 CALR3Q96L12 384 aaKnown RBP18.93■□□□□ 0.62
CDK11B-204ENST00000407249 FPGT-TNNI3KV9GXZ4 949 aa18.93■□□□□ 0.62
CDK11B-204ENST00000407249 ATL3Q6DD88 541 aa18.92■□□□□ 0.62
CDK11B-204ENST00000407249 LMBR1LQ6UX01 489 aa18.92■□□□□ 0.62
CDK11B-204ENST00000407249 STOX1Q6ZVD7 989 aa18.92■□□□□ 0.62
CDK11B-204ENST00000407249 CREBRFQ8IUR6 639 aa18.92■□□□□ 0.62
CDK11B-204ENST00000407249 ZNF397Q8NF99 534 aaPredicted RBP18.92■□□□□ 0.62
CDK11B-204ENST00000407249 A0A087WWV3 80 aa18.92■□□□□ 0.62
CDK11B-204ENST00000407249 RAD51AP2Q09MP3 1159 aa18.92■□□□□ 0.62
CDK11B-204ENST00000407249 TCIRG1Q13488 830 aa18.92■□□□□ 0.62
CDK11B-204ENST00000407249 CEP57L1Q8IYX8 460 aa18.91■□□□□ 0.62
CDK11B-204ENST00000407249 ZNF513Q8N8E2 541 aaPredicted RBP18.91■□□□□ 0.62
CDK11B-204ENST00000407249 ZBTB3Q9H5J0 574 aa18.91■□□□□ 0.62
CDK11B-204ENST00000407249 TRMT1Q9NXH9 659 aaKnown RBP18.91■□□□□ 0.62
CDK11B-204ENST00000407249 ASAP1Q9ULH1 1129 aa18.91■□□□□ 0.62
CDK11B-204ENST00000407249 PTPDC1A2A3K4 754 aa18.91■□□□□ 0.62
CDK11B-204ENST00000407249 DHX32Q7L7V1 743 aaKnown RBP18.91■□□□□ 0.62
CDK11B-204ENST00000407249 ERO1AQ96HE7 468 aa18.91■□□□□ 0.62
CDK11B-204ENST00000407249 SUFUQ9UMX1 484 aa18.91■□□□□ 0.62
CDK11B-204ENST00000407249 NWD2Q9ULI1 1742 aa18.91■□□□□ 0.62
CDK11B-204ENST00000407249 TFCP2Q12800 502 aa18.9■□□□□ 0.62
CDK11B-204ENST00000407249 DNAJC10Q8IXB1 793 aa18.9■□□□□ 0.62
CDK11B-204ENST00000407249 TMX1Q9H3N1 280 aa18.9■□□□□ 0.62
CDK11B-204ENST00000407249 FOSBP53539 338 aa18.9■□□□□ 0.62
CDK11B-204ENST00000407249 ZNF396Q96N95 335 aaPredicted RBP18.9■□□□□ 0.62
CDK11B-204ENST00000407249 CIAO1O76071 339 aa18.89■□□□□ 0.62
CDK11B-204ENST00000407249 IL15P40933 162 aaPredicted RBP18.89■□□□□ 0.62
CDK11B-204ENST00000407249 AOPEPQ8N6M6 819 aa18.89■□□□□ 0.62
CDK11B-204ENST00000407249 ITFG2Q969R8 447 aa18.89■□□□□ 0.62
CDK11B-204ENST00000407249 HAUS7Q99871 368 aa18.89■□□□□ 0.62
CDK11B-204ENST00000407249 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.89■□□□□ 0.62
CDK11B-204ENST00000407249 V9GYY5 206 aaPredicted RBP18.89■□□□□ 0.62
CDK11B-204ENST00000407249 ME1P48163 572 aa18.89■□□□□ 0.61
CDK11B-204ENST00000407249 GSDMDP57764 484 aa18.89■□□□□ 0.61
CDK11B-204ENST00000407249 KRT222Q8N1A0 295 aa18.89■□□□□ 0.61
CDK11B-204ENST00000407249 FSIP1Q8NA03 581 aa18.89■□□□□ 0.61
CDK11B-204ENST00000407249 PLA2G12BQ9BX93 195 aa18.89■□□□□ 0.61
CDK11B-204ENST00000407249 AGXT2Q9BYV1 514 aa18.89■□□□□ 0.61
CDK11B-204ENST00000407249 NAT10Q9H0A0 1025 aaKnown RBP18.89■□□□□ 0.61
CDK11B-204ENST00000407249 OSBPL5Q9H0X9 879 aaPredicted RBP18.89■□□□□ 0.61
CDK11B-204ENST00000407249 SALL1Q9NSC2 1324 aa18.89■□□□□ 0.61
CDK11B-204ENST00000407249 APOBRQ0VD83 1088 aa18.88■□□□□ 0.61
CDK11B-204ENST00000407249 FAM53CQ9NYF3 392 aa18.88■□□□□ 0.61
CDK11B-204ENST00000407249 DOT1LQ8TEK3 1739 aa18.88■□□□□ 0.61
CDK11B-204ENST00000407249 MAP3K15Q6ZN16 1313 aa18.88■□□□□ 0.61
CDK11B-204ENST00000407249 KIF2AO00139 706 aaPredicted RBP18.88■□□□□ 0.61
CDK11B-204ENST00000407249 SLFNL1Q499Z3 407 aa18.88■□□□□ 0.61
CDK11B-204ENST00000407249 FBXO38Q6PIJ6 1188 aa18.88■□□□□ 0.61
CDK11B-204ENST00000407249 ERCC4Q92889 916 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms