RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 AIFM3Q96NN9 605 aa11.53□□□□□ -0.56
MSH2-202ENST00000406134 FAM217BQ9NTX9 383 aaPredicted RBP11.53□□□□□ -0.56
MSH2-202ENST00000406134 PRC1O43663 620 aa11.53□□□□□ -0.56
MSH2-202ENST00000406134 FBXO18Q8NFZ0 1043 aa11.53□□□□□ -0.56
MSH2-202ENST00000406134 WDHD1O75717 1129 aaPredicted RBP11.53□□□□□ -0.56
MSH2-202ENST00000406134 TPM3P06753 285 aa11.53□□□□□ -0.56
MSH2-202ENST00000406134 FGD1P98174 961 aa11.53□□□□□ -0.56
MSH2-202ENST00000406134 GIGYF2Q6Y7W6 1299 aaKnown RBP11.53□□□□□ -0.56
MSH2-202ENST00000406134 MRFAP1L1Q96HT8 127 aa11.53□□□□□ -0.56
MSH2-202ENST00000406134 CEP126Q9P2H0 1117 aa11.53□□□□□ -0.56
MSH2-202ENST00000406134 LAMB1P07942 1786 aa11.53□□□□□ -0.56
MSH2-202ENST00000406134 RBM6P78332 1123 aaKnown RBP11.52□□□□□ -0.56
MSH2-202ENST00000406134 CCDC57Q2TAC2 916 aa11.52□□□□□ -0.56
MSH2-202ENST00000406134 TTC39AQ5SRH9 613 aa11.52□□□□□ -0.56
MSH2-202ENST00000406134 ADALQ6DHV7 355 aa11.52□□□□□ -0.56
MSH2-202ENST00000406134 POLR3EQ9NVU0 708 aa11.52□□□□□ -0.56
MSH2-202ENST00000406134 A0A1B0GVL5 298 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 A0A1W2PQ27 194 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 A0A1W2PQ64 194 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 A0A1W2PQD8 194 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 CYP19A1P11511 503 aaPredicted RBP11.52□□□□□ -0.57
MSH2-202ENST00000406134 FGFR2P21802 821 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 CDC27P30260 824 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 KIF23Q02241 960 aaPredicted RBP11.52□□□□□ -0.57
MSH2-202ENST00000406134 NCAPHQ15003 741 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 NTRK3Q16288 839 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 STX1AQ16623 288 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 LRRC8AQ8IWT6 810 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 CLIP2Q9UDT6 1046 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 MYH13Q9UKX3 1938 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.52□□□□□ -0.57
MSH2-202ENST00000406134 KLF18A0A0U1RQI7 1052 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 ITGA6P23229 1130 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 ARID4AP29374 1257 aaPredicted RBP11.52□□□□□ -0.57
MSH2-202ENST00000406134 DPCR1Q3MIW9 517 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 FSIP1Q8NA03 581 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 EPB41L4AQ9HCS5 686 aaPredicted RBP11.52□□□□□ -0.57
MSH2-202ENST00000406134 INCENPQ9NQS7 918 aa11.52□□□□□ -0.57
MSH2-202ENST00000406134 NID2Q14112 1375 aa11.51□□□□□ -0.57
MSH2-202ENST00000406134 GOLGA6L4A6NEF3 574 aa11.51□□□□□ -0.57
MSH2-202ENST00000406134 RANBP6O60518 1105 aaKnown RBP11.51□□□□□ -0.57
MSH2-202ENST00000406134 CTSWP56202 376 aa11.51□□□□□ -0.57
MSH2-202ENST00000406134 MAP3K14Q99558 947 aa11.51□□□□□ -0.57
MSH2-202ENST00000406134 TRIM5Q9C035 493 aa11.51□□□□□ -0.57
MSH2-202ENST00000406134 ZFYP08048 801 aaPredicted RBP11.51□□□□□ -0.57
MSH2-202ENST00000406134 MYSM1Q5VVJ2 828 aa11.51□□□□□ -0.57
MSH2-202ENST00000406134 WWC3Q9ULE0 1092 aa11.51□□□□□ -0.57
MSH2-202ENST00000406134 SH2B2O14492 632 aaPredicted RBP11.5□□□□□ -0.57
MSH2-202ENST00000406134 PTPAQ15257 358 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 NYAP1Q6ZVC0 841 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 SBF2Q86WG5 1849 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 GOLGA8BA8MQT2 603 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 CTAGE5O15320 804 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 CAVIN2O95810 425 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 PHKA1P46020 1223 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 CCDC158Q5M9N0 1113 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 IGDCC4Q8TDY8 1250 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 MRPS27Q92552 414 aaKnown RBP11.5□□□□□ -0.57
MSH2-202ENST00000406134 MAP7D2Q96T17 732 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 SLAIN2Q9P270 581 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 AKAP2Q9Y2D5 859 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 KIAA1551Q9HCM1 1747 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 ATP2B3Q16720 1220 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 IMMTQ16891 758 aaKnown RBP11.5□□□□□ -0.57
MSH2-202ENST00000406134 DNTTIP2Q5QJE6 756 aaKnown RBP11.5□□□□□ -0.57
MSH2-202ENST00000406134 AEBP2Q6ZN18 517 aaPredicted RBP11.5□□□□□ -0.57
MSH2-202ENST00000406134 STRN4Q9NRL3 753 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 KCND1Q9NSA2 647 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 TMOD3Q9NYL9 352 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 HPSEQ9Y251 543 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 ZMYM6O95789 1325 aa11.5□□□□□ -0.57
MSH2-202ENST00000406134 COL1A1P02452 1464 aaPredicted RBP11.5□□□□□ -0.57
MSH2-202ENST00000406134 POLR3DP05423 398 aaPredicted RBP11.49□□□□□ -0.57
MSH2-202ENST00000406134 NCBP1Q09161 790 aaKnown RBP11.49□□□□□ -0.57
MSH2-202ENST00000406134 BPIFA3Q9BQP9 254 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 ZBTB1Q9Y2K1 713 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 ZNF335Q9H4Z2 1342 aaPredicted RBP11.49□□□□□ -0.57
MSH2-202ENST00000406134 ZNF831Q5JPB2 1677 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 YEATS4O95619 227 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 GPTP24298 496 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 IFIT5Q13325 482 aaKnown RBP11.49□□□□□ -0.57
MSH2-202ENST00000406134 SHISA4Q96DD7 197 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 ZNF396Q96N95 335 aaPredicted RBP11.49□□□□□ -0.57
MSH2-202ENST00000406134 BCL11BQ9C0K0 894 aaPredicted RBP11.49□□□□□ -0.57
MSH2-202ENST00000406134 LY9Q9HBG7 655 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 DUOX1Q9NRD9 1551 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 FAM237AA0A1B0GTK4 181 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 GOLGA6L6A8MZA4 724 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 ME1P48163 572 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 NAA30Q147X3 362 aaPredicted RBP11.49□□□□□ -0.57
MSH2-202ENST00000406134 WASHC4Q2M389 1173 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 AOPEPQ8N6M6 819 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 RGS22Q8NE09 1264 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 NCOA7Q8NI08 942 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 KIAA1468Q9P260 1216 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 KIF3AQ9Y496 699 aa11.49□□□□□ -0.57
MSH2-202ENST00000406134 SNAP23O00161 211 aa11.48□□□□□ -0.57
MSH2-202ENST00000406134 C16orf45Q96MC5 204 aaPredicted RBP11.48□□□□□ -0.57
MSH2-202ENST00000406134 PDE8BO95263 885 aa11.48□□□□□ -0.57
MSH2-202ENST00000406134 RXRAP19793 462 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms