RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 KDM4AO75164 1064 aa16.67■□□□□ 0.26
PRAME-205ENST00000405655 CTDNEP1O95476 244 aa16.67■□□□□ 0.26
PRAME-205ENST00000405655 SERPINB2P05120 415 aa16.67■□□□□ 0.26
PRAME-205ENST00000405655 MAP3K12Q12852 859 aa16.67■□□□□ 0.26
PRAME-205ENST00000405655 IMMTQ16891 758 aaKnown RBP16.67■□□□□ 0.26
PRAME-205ENST00000405655 CYB5R4Q7L1T6 521 aa16.67■□□□□ 0.26
PRAME-205ENST00000405655 SDR42E1Q8WUS8 393 aa16.67■□□□□ 0.26
PRAME-205ENST00000405655 GTF3C6Q969F1 213 aa16.67■□□□□ 0.26
PRAME-205ENST00000405655 RAI14Q9P0K7 980 aa16.67■□□□□ 0.26
PRAME-205ENST00000405655 BAZ2AQ9UIF9 1905 aaKnown RBP16.67■□□□□ 0.26
PRAME-205ENST00000405655 ZNF213O14771 459 aa16.67■□□□□ 0.26
PRAME-205ENST00000405655 APBA3O96018 575 aa16.67■□□□□ 0.26
PRAME-205ENST00000405655 OLFM4Q6UX06 510 aa16.67■□□□□ 0.26
PRAME-205ENST00000405655 ALDH8A1Q9H2A2 487 aaPredicted RBP16.67■□□□□ 0.26
PRAME-205ENST00000405655 ZNF804BA4D1E1 1349 aa16.66■□□□□ 0.26
PRAME-205ENST00000405655 WDR33Q9C0J8 1336 aaKnown RBP16.66■□□□□ 0.26
PRAME-205ENST00000405655 GSG1L2A8MUP6 293 aa16.66■□□□□ 0.26
PRAME-205ENST00000405655 GOLGA6L22H0YM25 854 aa16.66■□□□□ 0.26
PRAME-205ENST00000405655 RXRAP19793 462 aa16.66■□□□□ 0.26
PRAME-205ENST00000405655 CYP7A1P22680 504 aa16.66■□□□□ 0.26
PRAME-205ENST00000405655 UBE4AQ14139 1066 aa16.66■□□□□ 0.26
PRAME-205ENST00000405655 LARP1BQ659C4 914 aaKnown RBP16.66■□□□□ 0.26
PRAME-205ENST00000405655 USP48Q86UV5 1035 aa16.66■□□□□ 0.26
PRAME-205ENST00000405655 NEDD4P46934 1319 aa16.66■□□□□ 0.26
PRAME-205ENST00000405655 CYP2D7A0A087X1C5 515 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 B4E1Z4 1266 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 F13A1P00488 732 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 DNM1Q05193 864 aaKnown RBP16.65■□□□□ 0.26
PRAME-205ENST00000405655 LRRFIP1Q32MZ4 808 aaKnown RBP16.65■□□□□ 0.26
PRAME-205ENST00000405655 MSL1Q68DK7 614 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 ZSCAN25Q6NSZ9 544 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 MB21D2Q8IYB1 491 aaPredicted RBP16.65■□□□□ 0.26
PRAME-205ENST00000405655 PANK2Q9BZ23 570 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 PRC1O43663 620 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 ANKRD1Q15327 319 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 GRIK5Q16478 980 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 SLC4A8Q2Y0W8 1093 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 IFNL3Q8IZI9 196 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 ANKIB1Q9P2G1 1089 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 SLC4A4Q9Y6R1 1079 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 UTRNP46939 3433 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 CACNA1SQ13698 1873 aa16.65■□□□□ 0.26
PRAME-205ENST00000405655 RBM6P78332 1123 aaKnown RBP16.64■□□□□ 0.25
PRAME-205ENST00000405655 FBXO33Q7Z6M2 555 aa16.64■□□□□ 0.25
PRAME-205ENST00000405655 CHD4Q14839 1912 aa16.64■□□□□ 0.25
PRAME-205ENST00000405655 FIBPO43427 364 aa16.64■□□□□ 0.25
PRAME-205ENST00000405655 PRDX5P30044 214 aa16.64■□□□□ 0.25
PRAME-205ENST00000405655 PDIA3P30101 505 aaKnown RBP16.64■□□□□ 0.25
PRAME-205ENST00000405655 GUCY1B3Q02153 619 aa16.64■□□□□ 0.25
PRAME-205ENST00000405655 COL23A1Q86Y22 540 aaPredicted RBP16.64■□□□□ 0.25
PRAME-205ENST00000405655 CAVIN4Q5BKX8 364 aa16.63■□□□□ 0.25
PRAME-205ENST00000405655 ZKSCAN3Q9BRR0 538 aa16.63■□□□□ 0.25
PRAME-205ENST00000405655 GJB4Q9NTQ9 266 aa16.63■□□□□ 0.25
PRAME-205ENST00000405655 CTNNA3Q9UI47 895 aa16.63■□□□□ 0.25
PRAME-205ENST00000405655 HIBADHP31937 336 aaKnown RBP16.62■□□□□ 0.25
PRAME-205ENST00000405655 GPSM2P81274 684 aa16.62■□□□□ 0.25
PRAME-205ENST00000405655 CCDC144CPQ8IYA2 1237 aa16.62■□□□□ 0.25
PRAME-205ENST00000405655 TMEM63CQ9P1W3 806 aa16.62■□□□□ 0.25
PRAME-205ENST00000405655 RGS17Q9UGC6 210 aaPredicted RBP16.62■□□□□ 0.25
PRAME-205ENST00000405655 PATL2C9JE40 543 aaKnown RBP16.62■□□□□ 0.25
PRAME-205ENST00000405655 POLRMTO00411 1230 aaKnown RBP16.62■□□□□ 0.25
PRAME-205ENST00000405655 PFKFB2O60825 505 aa16.62■□□□□ 0.25
PRAME-205ENST00000405655 KLHL40Q2TBA0 621 aa16.62■□□□□ 0.25
PRAME-205ENST00000405655 RRP12Q5JTH9 1297 aaKnown RBP16.62■□□□□ 0.25
PRAME-205ENST00000405655 SLC27A3Q5K4L6 730 aa16.62■□□□□ 0.25
PRAME-205ENST00000405655 OTUD7BQ6GQQ9 843 aa16.62■□□□□ 0.25
PRAME-205ENST00000405655 NSUN7Q8NE18 718 aaKnown RBP16.62■□□□□ 0.25
PRAME-205ENST00000405655 MYL10Q9BUA6 226 aa16.62■□□□□ 0.25
PRAME-205ENST00000405655 TFIP11Q9UBB9 837 aaKnown RBP16.62■□□□□ 0.25
PRAME-205ENST00000405655 XRCC6P12956 609 aaKnown RBP eCLIP16.61■□□□□ 0.25
PRAME-205ENST00000405655 GRAPQ13588 217 aa16.61■□□□□ 0.25
PRAME-205ENST00000405655 GRAPLQ8TC17 118 aaPredicted RBP16.61■□□□□ 0.25
PRAME-205ENST00000405655 AGXT2Q9BYV1 514 aa16.61■□□□□ 0.25
PRAME-205ENST00000405655 HPS5Q9UPZ3 1129 aa16.61■□□□□ 0.25
PRAME-205ENST00000405655 IRS2Q9Y4H2 1338 aa16.61■□□□□ 0.25
PRAME-205ENST00000405655 KLF18A0A0U1RQI7 1052 aa16.61■□□□□ 0.25
PRAME-205ENST00000405655 POTEAQ6S8J7 498 aa16.61■□□□□ 0.25
PRAME-205ENST00000405655 NCOA7Q8NI08 942 aa16.61■□□□□ 0.25
PRAME-205ENST00000405655 RPGRQ92834 1020 aaKnown RBP16.61■□□□□ 0.25
PRAME-205ENST00000405655 NAPBQ9H115 298 aa16.61■□□□□ 0.25
PRAME-205ENST00000405655 FSD2A1L4K1 749 aa16.6■□□□□ 0.25
PRAME-205ENST00000405655 MINDY4BA8MYZ0 360 aa16.6■□□□□ 0.25
PRAME-205ENST00000405655 UBE2Q2LH0YL09 131 aa16.6■□□□□ 0.25
PRAME-205ENST00000405655 HMGB1P09429 215 aaKnown RBP16.6■□□□□ 0.25
PRAME-205ENST00000405655 MECOMQ03112 1051 aa16.6■□□□□ 0.25
PRAME-205ENST00000405655 GNL3LQ9NVN8 582 aaKnown RBP16.6■□□□□ 0.25
PRAME-205ENST00000405655 PTPDC1A2A3K4 754 aa16.6■□□□□ 0.25
PRAME-205ENST00000405655 GOLGA6L3A6NEY3 463 aa16.6■□□□□ 0.25
PRAME-205ENST00000405655 RGL2O15211 777 aa16.6■□□□□ 0.25
PRAME-205ENST00000405655 ADRA2BP18089 450 aa16.6■□□□□ 0.25
PRAME-205ENST00000405655 MCM5P33992 734 aa16.6■□□□□ 0.25
PRAME-205ENST00000405655 TDO2P48775 406 aa16.6■□□□□ 0.25
PRAME-205ENST00000405655 SKOR2Q2VWA4 1001 aaPredicted RBP16.6■□□□□ 0.25
PRAME-205ENST00000405655 RALYLQ86SE5 291 aaKnown RBP16.6■□□□□ 0.25
PRAME-205ENST00000405655 TICAM2Q86XR7 235 aa16.6■□□□□ 0.25
PRAME-205ENST00000405655 TOMM22Q9NS69 142 aa16.6■□□□□ 0.25
PRAME-205ENST00000405655 MYH2Q9UKX2 1941 aa16.59■□□□□ 0.25
PRAME-205ENST00000405655 FDPSP14324 419 aaKnown RBP16.59■□□□□ 0.25
PRAME-205ENST00000405655 ZSCAN23Q3MJ62 389 aa16.59■□□□□ 0.25
PRAME-205ENST00000405655 AATFQ9NY61 560 aaKnown RBP eCLIP16.59■□□□□ 0.253e-7■□□□□ 9.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms