RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 PZPP20742 1482 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 TTC22Q5TAA0 569 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 MCTP2Q6DN12 878 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.04□□□□□ -0.96
USP47-203ENST00000399455 OVOS2A0A0G2JMS6 1433 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 OVOS2A0A0J9YW53 1432 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 OVOS2Q6IE36 1432 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 SERPINB2P05120 415 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 FMNL3Q8IVF7 1028 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 AP5M1Q9H0R1 490 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 ERBB4Q15303 1308 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 WDR17Q8IZU2 1322 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 KDM2BQ8NHM5 1336 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 GSE1Q14687 1217 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 TDRD12Q587J7 1177 aaKnown RBP9.04□□□□□ -0.96
USP47-203ENST00000399455 TTLL6Q8N841 843 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 RSPH6AQ9H0K4 717 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.04□□□□□ -0.965e-7■■■□□ 17.6
USP47-203ENST00000399455 PNMA3Q9UL41 463 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 ARAP3Q8WWN8 1544 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 USPL1Q5W0Q7 1092 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 RSPH3Q86UC2 560 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 MCF2L2Q86YR7 1114 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 PLVAPQ9BX97 442 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 MMRN2Q9H8L6 949 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 SLC1A4P43007 532 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 MFSD14BQ5SR56 506 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 CDC37L1Q7L3B6 337 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 ARID3AQ99856 593 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 TCP10L2B9ZVM9 353 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 FAM193BQ96PV7 902 aaPredicted RBP9.03□□□□□ -0.96
USP47-203ENST00000399455 NUP88Q99567 741 aaPredicted RBP9.03□□□□□ -0.96
USP47-203ENST00000399455 AATFQ9NY61 560 aaKnown RBP eCLIP9.03□□□□□ -0.96
USP47-203ENST00000399455 A1BGP04217 495 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 ARHGEF16Q5VV41 709 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 ARPP21Q9UBL0 812 aaPredicted RBP9.03□□□□□ -0.96
USP47-203ENST00000399455 LEMD3Q9Y2U8 911 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 PARD3Q8TEW0 1356 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 CCDC171Q6TFL3 1326 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 HAUS3Q68CZ6 603 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 HS2ST1Q7LGA3 356 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 DPP9Q86TI2 863 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 SPATA5Q8NB90 893 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 ALS2CR12Q96Q35 445 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 STAMBPO95630 424 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 XAGE2Q96GT9 111 aa9.03□□□□□ -0.96
USP47-203ENST00000399455 BIRC2Q13490 618 aa9.02□□□□□ -0.96
USP47-203ENST00000399455 ARHGAP29Q52LW3 1261 aa9.02□□□□□ -0.96
USP47-203ENST00000399455 NCAPG2Q86XI2 1143 aa9.02□□□□□ -0.96
USP47-203ENST00000399455 IQCA1LA6NCM1 817 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 ERLIN1O75477 346 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 BBOX1O75936 387 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 NACA2Q9H009 215 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 RNF216Q9NWF9 866 aaPredicted RBP9.02□□□□□ -0.97
USP47-203ENST00000399455 CD2APQ9Y5K6 639 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 ATP7BP35670 1465 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 C8orf58Q8NAV2 365 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 GAS8O95995 478 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 A0A1B0GUL7 405 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 GJB2P29033 226 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 PDE4DQ08499 809 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 ERFEQ4G0M1 354 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 RNF214Q8ND24 703 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 SREK1Q8WXA9 508 aaKnown RBP9.02□□□□□ -0.97
USP47-203ENST00000399455 KIFC2Q96AC6 838 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 MAP3K15Q6ZN16 1313 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 ATP10DQ9P241 1426 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 IL13P35225 146 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 WDR44Q5JSH3 913 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 MASTLQ96GX5 879 aa9.02□□□□□ -0.97
USP47-203ENST00000399455 IBTKQ9P2D0 1353 aaPredicted RBP9.01□□□□□ -0.97
USP47-203ENST00000399455 CIAPIN1Q6FI81 312 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 OTUD6AQ7L8S5 288 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 DPH6Q7L8W6 267 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 MRVI1Q9Y6F6 885 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 SYNMO15061 1565 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 PRPHP41219 470 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 DOK7Q18PE1 504 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 TRIM47Q96LD4 638 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 MEIS3Q99687 375 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 MLXIPQ9HAP2 919 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 NOC2LQ9Y3T9 749 aaKnown RBP9.01□□□□□ -0.97
USP47-203ENST00000399455 MACROD2A1Z1Q3 448 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 IL6STP40189 918 aaPredicted RBP9.01□□□□□ -0.97
USP47-203ENST00000399455 NMIQ13287 307 aaPredicted RBP9.01□□□□□ -0.97
USP47-203ENST00000399455 FSIP1Q8NA03 581 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 SLC10A4Q96EP9 437 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 INSRP06213 1382 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 KCTD2Q14681 263 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 CCDC102BQ68D86 513 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 ANKRD44Q8N8A2 993 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 FNBP1Q96RU3 617 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 RTEL1Q9NZ71 1219 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 FRMD4BQ9Y2L6 1034 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 TET3O43151 1660 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 TRAK2O60296 914 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 MRE11P49959 708 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 SMC1AQ14683 1233 aaKnown RBP9.01□□□□□ -0.97
USP47-203ENST00000399455 RRAGBQ5VZM2 374 aa9.01□□□□□ -0.97
USP47-203ENST00000399455 CCDC24Q8N4L8 307 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms