RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 PRMT3O60678 531 aa5.37□□□□□ -1.55
CD47-203ENST00000398258 CD8BP10966 210 aa5.37□□□□□ -1.55
CD47-203ENST00000398258 LRRN4CLQ8ND94 238 aa5.37□□□□□ -1.55
CD47-203ENST00000398258 TMEM40Q8WWA1 233 aa5.37□□□□□ -1.55
CD47-203ENST00000398258 CHRDQ9H2X0 955 aa5.37□□□□□ -1.55
CD47-203ENST00000398258 RC3H2Q9HBD1 1191 aaKnown RBP5.37□□□□□ -1.55
CD47-203ENST00000398258 ADH5P11766 374 aa5.36□□□□□ -1.55
CD47-203ENST00000398258 FUT4P22083 530 aa5.36□□□□□ -1.55
CD47-203ENST00000398258 PKN1Q16512 942 aa5.36□□□□□ -1.55
CD47-203ENST00000398258 EXOSC6Q5RKV6 272 aaKnown RBP5.36□□□□□ -1.55
CD47-203ENST00000398258 HOMEZQ8IX15 550 aa5.36□□□□□ -1.55
CD47-203ENST00000398258 VRTNQ9H8Y1 702 aa5.36□□□□□ -1.55
CD47-203ENST00000398258 A6NHS1 94 aa5.35□□□□□ -1.55
CD47-203ENST00000398258 BIN1O00499 593 aa5.35□□□□□ -1.55
CD47-203ENST00000398258 RAB6AP20340 208 aa5.35□□□□□ -1.55
CD47-203ENST00000398258 LMOD1P29536 600 aaPredicted RBP5.35□□□□□ -1.55
CD47-203ENST00000398258 FAM69CQ0P6D2 419 aa5.35□□□□□ -1.55
CD47-203ENST00000398258 IKBKEQ14164 716 aa5.35□□□□□ -1.55
CD47-203ENST00000398258 NAA30Q147X3 362 aaPredicted RBP5.35□□□□□ -1.55
CD47-203ENST00000398258 PLD6Q8N2A8 252 aaKnown RBP5.35□□□□□ -1.55
CD47-203ENST00000398258 TMEM102Q8N9M5 508 aaPredicted RBP5.35□□□□□ -1.55
CD47-203ENST00000398258 NXPE3Q969Y0 559 aa5.35□□□□□ -1.55
CD47-203ENST00000398258 MKNK1Q9BUB5 465 aa5.35□□□□□ -1.55
CD47-203ENST00000398258 ACSS3Q9H6R3 686 aa5.35□□□□□ -1.55
CD47-203ENST00000398258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.35□□□□□ -1.55
CD47-203ENST00000398258 FAM105AQ9NUU6 356 aa5.35□□□□□ -1.55
CD47-203ENST00000398258 ZNF503-AS2A6NEH8 195 aa5.34□□□□□ -1.55
CD47-203ENST00000398258 FAM177BA6PVY3 158 aa5.34□□□□□ -1.55
CD47-203ENST00000398258 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.34□□□□□ -1.55
CD47-203ENST00000398258 DUSP27Q5VZP5 1158 aa5.34□□□□□ -1.55
CD47-203ENST00000398258 ATCAYQ86WG3 371 aa5.34□□□□□ -1.55
CD47-203ENST00000398258 NUDT16Q96DE0 195 aaKnown RBP5.34□□□□□ -1.55
CD47-203ENST00000398258 ZKSCAN3Q9BRR0 538 aa5.34□□□□□ -1.55
CD47-203ENST00000398258 FNDC3AQ9Y2H6 1198 aaKnown RBP5.34□□□□□ -1.55
CD47-203ENST00000398258 ESRRAP11474 423 aaPredicted RBP5.33□□□□□ -1.56
CD47-203ENST00000398258 ARL4DP49703 201 aa5.33□□□□□ -1.56
CD47-203ENST00000398258 CDCA8Q53HL2 280 aa5.33□□□□□ -1.56
CD47-203ENST00000398258 FAM181AQ8N9Y4 354 aa5.33□□□□□ -1.56
CD47-203ENST00000398258 FAM200AQ8TCP9 573 aa5.33□□□□□ -1.56
CD47-203ENST00000398258 BSNDQ8WZ55 320 aa5.33□□□□□ -1.56
CD47-203ENST00000398258 LMCD1Q9NZU5 365 aa5.33□□□□□ -1.56
CD47-203ENST00000398258 CRIM1Q9NZV1 1036 aa5.33□□□□□ -1.56
CD47-203ENST00000398258 ARID3CA6NKF2 412 aa5.32□□□□□ -1.56
CD47-203ENST00000398258 ECEL1O95672 775 aa5.32□□□□□ -1.56
CD47-203ENST00000398258 KRT1P04264 644 aa5.32□□□□□ -1.56
CD47-203ENST00000398258 ECM1Q16610 540 aa5.32□□□□□ -1.56
CD47-203ENST00000398258 PDE12Q6L8Q7 609 aaKnown RBP5.32□□□□□ -1.56
CD47-203ENST00000398258 ZNF438Q7Z4V0 828 aa5.32□□□□□ -1.56
CD47-203ENST00000398258 FAM84AQ96KN4 292 aa5.32□□□□□ -1.56
CD47-203ENST00000398258 GGNBP2Q9H3C7 697 aa5.32□□□□□ -1.56
CD47-203ENST00000398258 SOX17Q9H6I2 414 aaPredicted RBP5.32□□□□□ -1.56
CD47-203ENST00000398258 LGR6Q9HBX8 967 aa5.32□□□□□ -1.56
CD47-203ENST00000398258 METTL12A8MUP2 240 aa5.31□□□□□ -1.56
CD47-203ENST00000398258 CES1P23141 567 aa5.31□□□□□ -1.56
CD47-203ENST00000398258 CFAP70Q5T0N1 1121 aa5.31□□□□□ -1.56
CD47-203ENST00000398258 OGFOD3Q6PK18 319 aa5.31□□□□□ -1.56
CD47-203ENST00000398258 TTLL10Q6ZVT0 673 aa5.31□□□□□ -1.56
CD47-203ENST00000398258 LRRC56Q8IYG6 542 aaPredicted RBP5.31□□□□□ -1.56
CD47-203ENST00000398258 OSMRQ99650 979 aa5.31□□□□□ -1.56
CD47-203ENST00000398258 FAM13BQ9NYF5 915 aa5.31□□□□□ -1.56
CD47-203ENST00000398258 ZMIZ1Q9ULJ6 1067 aa5.31□□□□□ -1.56
CD47-203ENST00000398258 LRRC10BA6NIK2 292 aa5.3□□□□□ -1.56
CD47-203ENST00000398258 CYP27A1Q02318 531 aa5.3□□□□□ -1.56
CD47-203ENST00000398258 GSTM4Q03013 218 aa5.3□□□□□ -1.56
CD47-203ENST00000398258 STK11IPQ8N1F8 1099 aa5.3□□□□□ -1.56
CD47-203ENST00000398258 CCDC82Q8N4S0 544 aa5.3□□□□□ -1.56
CD47-203ENST00000398258 SLC38A3Q99624 504 aa5.3□□□□□ -1.56
CD47-203ENST00000398258 GSX1Q9H4S2 264 aaPredicted RBP5.3□□□□□ -1.56
CD47-203ENST00000398258 PRDM7Q9NQW5 492 aa5.3□□□□□ -1.56
CD47-203ENST00000398258 STIM2Q9P246 746 aa5.3□□□□□ -1.56
CD47-203ENST00000398258 ZNF777Q9ULD5 760 aaPredicted RBP5.3□□□□□ -1.56
CD47-203ENST00000398258 NOVA2Q9UNW9 492 aaKnown RBP5.3□□□□□ -1.56
CD47-203ENST00000398258 MAP7Q14244 749 aa5.29□□□□□ -1.56
CD47-203ENST00000398258 MLANAQ16655 118 aa5.29□□□□□ -1.56
CD47-203ENST00000398258 DYMQ7RTS9 669 aa5.29□□□□□ -1.56
CD47-203ENST00000398258 BHLHE22Q8NFJ8 381 aaPredicted RBP5.29□□□□□ -1.56
CD47-203ENST00000398258 LATS2Q9NRM7 1088 aa5.29□□□□□ -1.56
CD47-203ENST00000398258 SERPINA10Q9UK55 444 aa5.29□□□□□ -1.56
CD47-203ENST00000398258 EREGO14944 169 aa5.28□□□□□ -1.56
CD47-203ENST00000398258 TSPAN15O95858 294 aa5.28□□□□□ -1.56
CD47-203ENST00000398258 ZSCAN22P10073 491 aaPredicted RBP5.28□□□□□ -1.56
CD47-203ENST00000398258 RAP1GAPP47736 663 aa5.28□□□□□ -1.56
CD47-203ENST00000398258 CDK5R2Q13319 367 aa5.28□□□□□ -1.56
CD47-203ENST00000398258 PEAR1Q5VY43 1037 aaPredicted RBP5.28□□□□□ -1.56
CD47-203ENST00000398258 XKR5Q6UX68 686 aa5.28□□□□□ -1.56
CD47-203ENST00000398258 ASAP3Q8TDY4 903 aa5.28□□□□□ -1.56
CD47-203ENST00000398258 STK32AQ8WU08 396 aa5.28□□□□□ -1.56
CD47-203ENST00000398258 LIN37Q96GY3 246 aaPredicted RBP5.28□□□□□ -1.56
CD47-203ENST00000398258 CALR3Q96L12 384 aaKnown RBP5.28□□□□□ -1.56
CD47-203ENST00000398258 YIPF2Q9BWQ6 316 aa5.28□□□□□ -1.56
CD47-203ENST00000398258 BHLHE41Q9C0J9 482 aaPredicted RBP5.28□□□□□ -1.56
CD47-203ENST00000398258 CXXC1Q9P0U4 656 aaPredicted RBP5.28□□□□□ -1.56
CD47-203ENST00000398258 PLAGL2Q9UPG8 496 aa5.28□□□□□ -1.56
CD47-203ENST00000398258 DAGLAQ9Y4D2 1042 aa5.28□□□□□ -1.56
CD47-203ENST00000398258 ACIN1Q9UKV3 1341 aaKnown RBP5.27□□□□□ -1.57
CD47-203ENST00000398258 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.27□□□□□ -1.57
CD47-203ENST00000398258 MAOBP27338 520 aa5.27□□□□□ -1.57
CD47-203ENST00000398258 SWI5Q1ZZU3 235 aa5.27□□□□□ -1.57
CD47-203ENST00000398258 ZNF423Q2M1K9 1284 aa5.27□□□□□ -1.57
CD47-203ENST00000398258 AKAP4Q5JQC9 854 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms