RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 WDR91A4D1P6 747 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 LRRIQ3A6PVS8 624 aaPredicted RBP14.36□□□□□ -0.11
CCBE1-201ENST00000398179 SYCE1LA8MT33 242 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 WDR46O15213 610 aaKnown RBP14.36□□□□□ -0.11
CCBE1-201ENST00000398179 ZC3H6P61129 1189 aaKnown RBP14.36□□□□□ -0.11
CCBE1-201ENST00000398179 IRX4P78413 519 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 ESCO1Q5FWF5 840 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 YIPF3Q9GZM5 350 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 MYO1CO00159 1063 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 LSM1O15116 133 aaKnown RBP14.36□□□□□ -0.11
CCBE1-201ENST00000398179 SLC26A4O43511 780 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 APOA4P06727 396 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 ARHGAP22Q7Z5H3 698 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 DHX57Q6P158 1386 aaKnown RBP14.36□□□□□ -0.11
CCBE1-201ENST00000398179 CAPN1P07384 714 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 STAT2P52630 851 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 PPCSQ9HAB8 311 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 GABBR1Q9UBS5 961 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 ZNF652Q9Y2D9 606 aa14.36□□□□□ -0.11
CCBE1-201ENST00000398179 XRCC6P12956 609 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCBE1-201ENST00000398179 KIF6Q6ZMV9 814 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 TANGO6Q9C0B7 1094 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 TMCC3Q9ULS5 477 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 SOGA1O94964 1423 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 HAND2P61296 217 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 ANO1Q5XXA6 986 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 VPS36Q86VN1 386 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 NME8Q8N427 588 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 ZNF396Q96N95 335 aaPredicted RBP14.35□□□□□ -0.11
CCBE1-201ENST00000398179 ST20-MTHFSA0A0A6YYL1 179 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 NDUFAB1O14561 156 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 IFIT2P09913 472 aaKnown RBP14.35□□□□□ -0.11
CCBE1-201ENST00000398179 SSFA2P28290 1259 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 CDC37Q16543 378 aaPredicted RBP14.35□□□□□ -0.11
CCBE1-201ENST00000398179 STAG1Q8WVM7 1258 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 SFMBT1Q9UHJ3 866 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 EIF2B5Q13144 721 aaKnown RBP14.35□□□□□ -0.11
CCBE1-201ENST00000398179 GOLGA8CPA6NN73 597 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 ATN1P54259 1190 aaPredicted RBP14.35□□□□□ -0.11
CCBE1-201ENST00000398179 P3H4Q92791 437 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 VTI1AQ96AJ9 217 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 SAMD15Q9P1V8 674 aa14.35□□□□□ -0.11
CCBE1-201ENST00000398179 CFAP157Q5JU67 520 aa14.34□□□□□ -0.11
CCBE1-201ENST00000398179 INTS8Q75QN2 995 aaKnown RBP14.34□□□□□ -0.11
CCBE1-201ENST00000398179 PNISRQ8TF01 805 aaKnown RBP14.34□□□□□ -0.11
CCBE1-201ENST00000398179 Q9H521 79 aa14.34□□□□□ -0.11
CCBE1-201ENST00000398179 RASAL2Q9UJF2 1139 aa14.34□□□□□ -0.11
CCBE1-201ENST00000398179 NUP155O75694 1391 aa14.34□□□□□ -0.11
CCBE1-201ENST00000398179 RASSF10A6NK89 507 aa14.34□□□□□ -0.11
CCBE1-201ENST00000398179 MCF2LO15068 1137 aa14.34□□□□□ -0.11
CCBE1-201ENST00000398179 TRIM74Q86UV6 250 aa14.34□□□□□ -0.11
CCBE1-201ENST00000398179 TRIM73Q86UV7 250 aa14.34□□□□□ -0.11
CCBE1-201ENST00000398179 XPOTO43592 962 aaKnown RBP14.34□□□□□ -0.11
CCBE1-201ENST00000398179 CHMP4BP1P59074 171 aa14.34□□□□□ -0.11
CCBE1-201ENST00000398179 CCDC30Q5VVM6 783 aa14.34□□□□□ -0.11
CCBE1-201ENST00000398179 C16orf45Q96MC5 204 aaPredicted RBP14.34□□□□□ -0.11
CCBE1-201ENST00000398179 UBE2OQ9C0C9 1292 aaKnown RBP14.34□□□□□ -0.11
CCBE1-201ENST00000398179 NAIF1Q69YI7 327 aaPredicted RBP14.33□□□□□ -0.11
CCBE1-201ENST00000398179 PHLDB3Q6NSJ2 640 aa14.33□□□□□ -0.11
CCBE1-201ENST00000398179 SCHIP1Q9P0W5 487 aaPredicted RBP14.33□□□□□ -0.11
CCBE1-201ENST00000398179 COBLO75128 1261 aa14.33□□□□□ -0.12
CCBE1-201ENST00000398179 CHRM1P11229 460 aaPredicted RBP14.33□□□□□ -0.12
CCBE1-201ENST00000398179 MLH1P40692 756 aa14.33□□□□□ -0.12
CCBE1-201ENST00000398179 MMP14P50281 582 aa14.33□□□□□ -0.12
CCBE1-201ENST00000398179 GSDMDP57764 484 aa14.33□□□□□ -0.12
CCBE1-201ENST00000398179 NOP9Q86U38 636 aaKnown RBP14.33□□□□□ -0.12
CCBE1-201ENST00000398179 CCDC125Q86Z20 511 aa14.33□□□□□ -0.12
CCBE1-201ENST00000398179 OMA1Q96E52 524 aa14.33□□□□□ -0.12
CCBE1-201ENST00000398179 NR1H4Q96RI1 486 aaPredicted RBP14.33□□□□□ -0.12
CCBE1-201ENST00000398179 DHX36Q9H2U1 1008 aaKnown RBP14.33□□□□□ -0.12
CCBE1-201ENST00000398179 FMN1Q68DA7 1419 aa14.33□□□□□ -0.12
CCBE1-201ENST00000398179 LSM14BQ9BX40 385 aaKnown RBP14.33□□□□□ -0.12
CCBE1-201ENST00000398179 NACA2Q9H009 215 aa14.33□□□□□ -0.12
CCBE1-201ENST00000398179 TRAK1Q9UPV9 953 aa14.33□□□□□ -0.12
CCBE1-201ENST00000398179 E9PMD0 336 aa14.33□□□□□ -0.12
CCBE1-201ENST00000398179 PUS10Q3MIT2 529 aaKnown RBP14.33□□□□□ -0.12
CCBE1-201ENST00000398179 IQCF2Q8IXL9 164 aa14.33□□□□□ -0.12
CCBE1-201ENST00000398179 C10orf88Q9H8K7 445 aa14.33□□□□□ -0.12
CCBE1-201ENST00000398179 ARHGEF25Q86VW2 580 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 BACH2Q9BYV9 841 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 STIM1Q13586 685 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 SEPT2Q15019 361 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 ANGPTL8Q6UXH0 198 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 SAMD3Q8N6K7 520 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 ZC3H15Q8WU90 426 aaKnown RBP14.32□□□□□ -0.12
CCBE1-201ENST00000398179 DDX21Q9NR30 783 aaKnown RBP eCLIP14.32□□□□□ -0.12
CCBE1-201ENST00000398179 A0A1B0GW55 424 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 CCDC189A1A4V9 331 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 RNF40O75150 1001 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 DUX4L2P0CJ85 424 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 DUX4L3P0CJ86 424 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 DUX4L4P0CJ87 422 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 DUX4L5P0CJ88 424 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 DUX4L6P0CJ89 424 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 DUX4L7P0CJ90 424 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 SNW1Q13573 536 aaKnown RBP14.32□□□□□ -0.12
CCBE1-201ENST00000398179 LMBRD2Q68DH5 695 aaPredicted RBP14.32□□□□□ -0.12
CCBE1-201ENST00000398179 AATFQ9NY61 560 aaKnown RBP eCLIP14.32□□□□□ -0.12
CCBE1-201ENST00000398179 DUX4Q9UBX2 424 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 SLC39A3Q9BRY0 314 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms