RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 HAUS2Q9NVX0 235 aa12.69□□□□□ -0.38
RGPD2-201ENST00000398146 CAPN15O75808 1086 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 SUPT20HQ8NEM7 779 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 BSPRYQ5W0U4 402 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 USP48Q86UV5 1035 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 TRIM7Q9C029 511 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 CD109Q6YHK3 1445 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 LEO1Q8WVC0 666 aaPredicted RBP12.68□□□□□ -0.38
RGPD2-201ENST00000398146 CCDC77Q9BR77 488 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 TCP10L2B9ZVM9 353 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 RXRAP19793 462 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 DPP9Q86TI2 863 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 MICALL1Q8N3F8 863 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 ATF5Q9Y2D1 282 aaPredicted RBP12.68□□□□□ -0.38
RGPD2-201ENST00000398146 MAN1A1P33908 653 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 PDE6BP35913 854 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 FBXW4P57775 412 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 CASC4Q6P4E1 433 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 TTC6Q86TZ1 520 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 VPS52Q8N1B4 723 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 KCNK9Q9NPC2 374 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 MOSPD1Q9UJG1 213 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 USTQ9Y2C2 406 aa12.68□□□□□ -0.38
RGPD2-201ENST00000398146 CLGNO14967 610 aa12.67□□□□□ -0.38
RGPD2-201ENST00000398146 YARSP54577 528 aaKnown RBP12.67□□□□□ -0.38
RGPD2-201ENST00000398146 CCDC102BQ68D86 513 aa12.67□□□□□ -0.38
RGPD2-201ENST00000398146 CNNM2Q9H8M5 875 aa12.67□□□□□ -0.38
RGPD2-201ENST00000398146 NCAPH2Q6IBW4 605 aa12.67□□□□□ -0.38
RGPD2-201ENST00000398146 C1orf228Q6PIY5 440 aa12.67□□□□□ -0.38
RGPD2-201ENST00000398146 BZW2Q9Y6E2 419 aaKnown RBP12.67□□□□□ -0.38
RGPD2-201ENST00000398146 FGD5Q6ZNL6 1462 aa12.67□□□□□ -0.38
RGPD2-201ENST00000398146 FAM83GA6ND36 823 aa12.67□□□□□ -0.38
RGPD2-201ENST00000398146 KANK3Q6NY19 840 aa12.67□□□□□ -0.38
RGPD2-201ENST00000398146 LMBR1LQ6UX01 489 aa12.67□□□□□ -0.38
RGPD2-201ENST00000398146 ATAD2BQ9ULI0 1458 aa12.67□□□□□ -0.38
RGPD2-201ENST00000398146 MICALCLQ6ZW33 695 aa12.67□□□□□ -0.38
RGPD2-201ENST00000398146 ACBD5Q5T8D3 534 aaPredicted RBP12.67□□□□□ -0.38
RGPD2-201ENST00000398146 RNASELQ05823 741 aaKnown RBP12.66□□□□□ -0.38
RGPD2-201ENST00000398146 HINFPQ9BQA5 517 aa12.66□□□□□ -0.38
RGPD2-201ENST00000398146 PRPHP41219 470 aa12.66□□□□□ -0.38
RGPD2-201ENST00000398146 LETM2Q2VYF4 491 aa12.66□□□□□ -0.38
RGPD2-201ENST00000398146 HS1BP3Q53T59 392 aa12.66□□□□□ -0.38
RGPD2-201ENST00000398146 KIAA1841Q6NSI8 718 aa12.66□□□□□ -0.38
RGPD2-201ENST00000398146 SYNJ2BP-COX16A0A087WUM0 186 aa12.66□□□□□ -0.38
RGPD2-201ENST00000398146 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.66□□□□□ -0.38
RGPD2-201ENST00000398146 NFATC2IPQ8NCF5 419 aa12.66□□□□□ -0.38
RGPD2-201ENST00000398146 SCAND2PQ9GZW5 306 aaPredicted RBP12.66□□□□□ -0.38
RGPD2-201ENST00000398146 COX16Q9P0S2 106 aa12.66□□□□□ -0.38
RGPD2-201ENST00000398146 KRT2P35908 639 aa12.66□□□□□ -0.38
RGPD2-201ENST00000398146 GDPD2Q9HCC8 539 aa12.66□□□□□ -0.38
RGPD2-201ENST00000398146 FTOQ9C0B1 505 aaKnown RBP eCLIP12.66□□□□□ -0.38
RGPD2-201ENST00000398146 SH2B1Q9NRF2 756 aaPredicted RBP12.66□□□□□ -0.38
RGPD2-201ENST00000398146 ACEP12821 1306 aa12.66□□□□□ -0.38
RGPD2-201ENST00000398146 CD19P15391 556 aa12.65□□□□□ -0.38
RGPD2-201ENST00000398146 ECHDC1Q9NTX5 307 aa12.65□□□□□ -0.38
RGPD2-201ENST00000398146 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.65□□□□□ -0.38
RGPD2-201ENST00000398146 V9GYY5 206 aaPredicted RBP12.65□□□□□ -0.38
RGPD2-201ENST00000398146 ITIH3Q06033 890 aa12.65□□□□□ -0.38
RGPD2-201ENST00000398146 SEPT6Q14141 434 aa12.65□□□□□ -0.38
RGPD2-201ENST00000398146 TMTC4Q5T4D3 741 aa12.65□□□□□ -0.38
RGPD2-201ENST00000398146 CFBP00751 764 aa12.65□□□□□ -0.38
RGPD2-201ENST00000398146 SLC4A1P02730 911 aa12.65□□□□□ -0.38
RGPD2-201ENST00000398146 RNF217Q8TC41 542 aa12.65□□□□□ -0.38
RGPD2-201ENST00000398146 SYKP43405 635 aa12.65□□□□□ -0.38
RGPD2-201ENST00000398146 KIFAP3Q92845 792 aa12.65□□□□□ -0.38
RGPD2-201ENST00000398146 TESPA1A2RU30 521 aaPredicted RBP12.65□□□□□ -0.39
RGPD2-201ENST00000398146 HCLS1P14317 486 aaPredicted RBP12.65□□□□□ -0.39
RGPD2-201ENST00000398146 MMS19Q96T76 1030 aa12.65□□□□□ -0.39
RGPD2-201ENST00000398146 SEPT10Q9P0V9 454 aa12.65□□□□□ -0.39
RGPD2-201ENST00000398146 WIZO95785 1651 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 ARHGEF16Q5VV41 709 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 DACT3Q96B18 629 aaPredicted RBP12.64□□□□□ -0.39
RGPD2-201ENST00000398146 USP25Q9UHP3 1055 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 C9orf84Q5VXU9 1444 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 ARHGEF35A5YM69 484 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 BNIP3LO60238 219 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 ERCC3P19447 782 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 KRT33BQ14525 404 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 NEK11Q8NG66 645 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 SLITRK6Q9H5Y7 841 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 CAPN9O14815 690 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 FBLN1P23142 703 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 CAPZA3Q96KX2 299 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 TCEANC2Q96MN5 208 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 AS3MTQ9HBK9 375 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 SEPT14Q6ZU15 432 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 SPDYE1Q8NFV5 336 aaPredicted RBP12.64□□□□□ -0.39
RGPD2-201ENST00000398146 ZBBXA8MT70 800 aa12.64□□□□□ -0.39
RGPD2-201ENST00000398146 CCNT1O60563 726 aaKnown RBP12.64□□□□□ -0.39
RGPD2-201ENST00000398146 RBM46Q8TBY0 533 aaKnown RBP12.64□□□□□ -0.39
RGPD2-201ENST00000398146 PSMA7O14818 248 aa12.63□□□□□ -0.39
RGPD2-201ENST00000398146 NECAB1Q8N987 351 aa12.63□□□□□ -0.39
RGPD2-201ENST00000398146 SEC62Q99442 399 aaKnown RBP12.63□□□□□ -0.39
RGPD2-201ENST00000398146 STIM2Q9P246 746 aa12.63□□□□□ -0.39
RGPD2-201ENST00000398146 BRD4O60885 1362 aaPredicted RBP12.63□□□□□ -0.39
RGPD2-201ENST00000398146 EPB41P11171 864 aaKnown RBP12.63□□□□□ -0.39
RGPD2-201ENST00000398146 BRF1Q92994 677 aa12.63□□□□□ -0.39
RGPD2-201ENST00000398146 NOX5Q96PH1 765 aa12.63□□□□□ -0.39
RGPD2-201ENST00000398146 ST7Q9NRC1 585 aa12.63□□□□□ -0.39
RGPD2-201ENST00000398146 TMTC2Q8N394 836 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms