RNA–Protein interactions for RNA: ENST00000397968.3

CDH7-202, Transcript of cadherin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH7, Length 12,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH7-202ENST00000397968 PTGS1P23219 599 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 TMEM87BQ96K49 555 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 DRC1Q96MC2 740 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 MMRN2Q9H8L6 949 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 PLXNC1O60486 1568 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 GBP1P32455 592 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 CCDC85AQ96PX6 553 aaPredicted RBP11.18□□□□□ -0.62
CDH7-202ENST00000397968 WAPLQ7Z5K2 1190 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 FCHSD1Q86WN1 690 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 PLEKHM2Q8IWE5 1019 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 URB2Q14146 1524 aaKnown RBP11.18□□□□□ -0.62
CDH7-202ENST00000397968 GOLGA6CA6NDK9 693 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 GOLGA6DP0CG33 693 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 BICD1Q96G01 975 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 USP26Q9BXU7 913 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 GOLGA6AQ9NYA3 693 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 ZEB2O60315 1214 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 CCDC84Q86UT8 332 aaPredicted RBP11.17□□□□□ -0.62
CDH7-202ENST00000397968 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDH7-202ENST00000397968 TMX1Q9H3N1 280 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 IFNKQ9P0W0 207 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 RNF113AO15541 343 aaKnown RBP11.17□□□□□ -0.62
CDH7-202ENST00000397968 CEP85Q6P2H3 762 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 SYT10Q6XYQ8 523 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 PARP2Q9UGN5 583 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 RAPGEF3O95398 923 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 C8orf74Q6P047 294 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 CCDC65Q8IXS2 484 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 PPP1R7Q15435 360 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 UBL4BQ8N7F7 174 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 TRPM2O94759 1503 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 ZC3H6P61129 1189 aaKnown RBP11.17□□□□□ -0.62
CDH7-202ENST00000397968 CCDC144CPQ8IYA2 1237 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 SYCE1Q8N0S2 351 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 PTPDC1A2A3K4 754 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 DEXIO95424 95 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 VCXQ9H320 206 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 KDM5AP29375 1690 aaKnown RBP11.17□□□□□ -0.62
CDH7-202ENST00000397968 CHMLP26374 656 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 LZTFL1Q9NQ48 299 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 ZNF518AQ6AHZ1 1483 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 DHX37Q8IY37 1157 aaKnown RBP11.17□□□□□ -0.62
CDH7-202ENST00000397968 FRMD4BQ9Y2L6 1034 aa11.17□□□□□ -0.62
CDH7-202ENST00000397968 KRBA2Q6ZNG9 492 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 NDUFAB1O14561 156 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 INTS8Q75QN2 995 aaKnown RBP11.16□□□□□ -0.62
CDH7-202ENST00000397968 ZNF830Q96NB3 372 aaPredicted RBP11.16□□□□□ -0.62
CDH7-202ENST00000397968 DNMT1P26358 1616 aaKnown RBP11.16□□□□□ -0.62
CDH7-202ENST00000397968 HOXB7P09629 217 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 TSNAXIP1Q2TAA8 658 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 CCDC51Q96ER9 411 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 PPIP5K1Q6PFW1 1433 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 NAPAP54920 295 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 SNX16P57768 344 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 BCAP29Q9UHQ4 241 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 SLC4A4Q9Y6R1 1079 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 COL17A1Q9UMD9 1497 aaPredicted RBP11.16□□□□□ -0.62
CDH7-202ENST00000397968 EXOC5O00471 708 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 IRX4P78413 519 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 INF2Q27J81 1249 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 PAIP2Q9BPZ3 127 aaKnown RBP11.16□□□□□ -0.62
CDH7-202ENST00000397968 PPFIA3O75145 1194 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 SLC9C2Q5TAH2 1124 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 TRERF1Q96PN7 1200 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 NYXQ9GZU5 481 aa11.16□□□□□ -0.62
CDH7-202ENST00000397968 HAUS3Q68CZ6 603 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 MARCKSP29966 332 aaPredicted RBP11.15□□□□□ -0.62
CDH7-202ENST00000397968 HAND2P61296 217 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
CDH7-202ENST00000397968 NBPF6Q5VWK0 638 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 SV2BQ7L1I2 683 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 NECAB1Q8N987 351 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 NBPF4Q96M43 638 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 CIB2O75838 187 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 NCBP1Q09161 790 aaKnown RBP11.15□□□□□ -0.62
CDH7-202ENST00000397968 GAS8O95995 478 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 INPP5BP32019 993 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 APBB1IPQ7Z5R6 666 aaPredicted RBP11.15□□□□□ -0.62
CDH7-202ENST00000397968 ABCC1P33527 1531 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 MAPK8IP2Q13387 824 aaPredicted RBP11.15□□□□□ -0.62
CDH7-202ENST00000397968 CFAP157Q5JU67 520 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 CNGA1P29973 690 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 BRD3Q15059 726 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 PHLDB2Q86SQ0 1253 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 SELENOSQ9BQE4 189 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 CHPF2Q9P2E5 772 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 GMNNO75496 209 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 DHX58Q96C10 678 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 CLSTN2Q9H4D0 955 aa11.15□□□□□ -0.62
CDH7-202ENST00000397968 PUF60Q9UHX1 559 aaKnown RBP11.15□□□□□ -0.62
CDH7-202ENST00000397968 ST5P78524 1137 aa11.15□□□□□ -0.63
CDH7-202ENST00000397968 NAA16Q6N069 864 aaPredicted RBP11.15□□□□□ -0.63
CDH7-202ENST00000397968 CCDC160A6NGH7 325 aa11.14□□□□□ -0.63
CDH7-202ENST00000397968 NMIQ13287 307 aaPredicted RBP11.14□□□□□ -0.63
CDH7-202ENST00000397968 CFAP221Q4G0U5 840 aa11.14□□□□□ -0.63
CDH7-202ENST00000397968 PHACTR2O75167 634 aa11.14□□□□□ -0.63
CDH7-202ENST00000397968 SETSIPP0DME0 302 aa11.14□□□□□ -0.63
CDH7-202ENST00000397968 SLC9C1Q4G0N8 1177 aa11.14□□□□□ -0.63
CDH7-202ENST00000397968 CCDC63Q8NA47 563 aa11.14□□□□□ -0.63
CDH7-202ENST00000397968 ACEP12821 1306 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms