RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 RASGRF1Q13972 1273 aa19.42■□□□□ 0.7
TRIM39-205ENST00000396551 SPATA5Q8NB90 893 aa19.42■□□□□ 0.7
TRIM39-205ENST00000396551 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.42■□□□□ 0.7
TRIM39-205ENST00000396551 PARP10Q53GL7 1025 aa19.42■□□□□ 0.7
TRIM39-205ENST00000396551 CYB5R4Q7L1T6 521 aa19.42■□□□□ 0.7
TRIM39-205ENST00000396551 MPNDQ8N594 471 aa19.42■□□□□ 0.7
TRIM39-205ENST00000396551 CHMP4CQ96CF2 233 aa19.42■□□□□ 0.7
TRIM39-205ENST00000396551 STRBPQ96SI9 672 aaKnown RBP19.42■□□□□ 0.7
TRIM39-205ENST00000396551 MPHOSPH8Q99549 860 aa19.42■□□□□ 0.7
TRIM39-205ENST00000396551 NUTM2BA6NNL0 878 aaPredicted RBP19.41■□□□□ 0.7
TRIM39-205ENST00000396551 NUTM2EB1AL46 878 aaPredicted RBP19.41■□□□□ 0.7
TRIM39-205ENST00000396551 OTUD7BQ6GQQ9 843 aa19.41■□□□□ 0.7
TRIM39-205ENST00000396551 NUTM2AQ8IVF1 878 aaPredicted RBP19.41■□□□□ 0.7
TRIM39-205ENST00000396551 NIP7Q9Y221 180 aaKnown RBP eCLIP19.41■□□□□ 0.7
TRIM39-205ENST00000396551 CHD4Q14839 1912 aa19.41■□□□□ 0.7
TRIM39-205ENST00000396551 KCNQ2O43526 872 aa19.41■□□□□ 0.7
TRIM39-205ENST00000396551 CASZ1Q86V15 1759 aa19.4■□□□□ 0.7
TRIM39-205ENST00000396551 FAM200AQ8TCP9 573 aa19.4■□□□□ 0.7
TRIM39-205ENST00000396551 APPP05067 770 aa19.4■□□□□ 0.7
TRIM39-205ENST00000396551 RTL9Q8NET4 1388 aa19.4■□□□□ 0.7
TRIM39-205ENST00000396551 CCDC152Q4G0S7 254 aa19.4■□□□□ 0.7
TRIM39-205ENST00000396551 GOLPH3LQ9H4A5 285 aa19.4■□□□□ 0.7
TRIM39-205ENST00000396551 EPB41L4AQ9HCS5 686 aaPredicted RBP19.4■□□□□ 0.7
TRIM39-205ENST00000396551 BARGINQ6ZT62 677 aa19.39■□□□□ 0.69
TRIM39-205ENST00000396551 A0A1B0GUL6 1792 aa19.39■□□□□ 0.69
TRIM39-205ENST00000396551 ATL3Q6DD88 541 aa19.39■□□□□ 0.69
TRIM39-205ENST00000396551 MAGEB6Q8N7X4 407 aa19.39■□□□□ 0.69
TRIM39-205ENST00000396551 AIDAQ96BJ3 306 aa19.39■□□□□ 0.69
TRIM39-205ENST00000396551 ZNF396Q96N95 335 aaPredicted RBP19.39■□□□□ 0.69
TRIM39-205ENST00000396551 ANO6Q4KMQ2 910 aa19.38■□□□□ 0.69
TRIM39-205ENST00000396551 ORC3Q9UBD5 711 aaPredicted RBP19.38■□□□□ 0.69
TRIM39-205ENST00000396551 ECM29Q5VYK3 1845 aa19.38■□□□□ 0.69
TRIM39-205ENST00000396551 NEDD4P46934 1319 aa19.38■□□□□ 0.69
TRIM39-205ENST00000396551 BCL9LQ86UU0 1499 aa19.38■□□□□ 0.69
TRIM39-205ENST00000396551 SH2B2O14492 632 aaPredicted RBP19.38■□□□□ 0.69
TRIM39-205ENST00000396551 BCAMP50895 628 aa19.38■□□□□ 0.69
TRIM39-205ENST00000396551 TRDNQ13061 729 aa19.38■□□□□ 0.69
TRIM39-205ENST00000396551 SENP2Q9HC62 589 aa19.38■□□□□ 0.69
TRIM39-205ENST00000396551 GJB4Q9NTQ9 266 aa19.38■□□□□ 0.69
TRIM39-205ENST00000396551 TAF1P21675 1872 aa19.38■□□□□ 0.69
TRIM39-205ENST00000396551 PLCB2Q00722 1185 aa19.38■□□□□ 0.69
TRIM39-205ENST00000396551 ALX1Q15699 326 aa19.38■□□□□ 0.69
TRIM39-205ENST00000396551 CCAR1Q8IX12 1150 aaKnown RBP19.38■□□□□ 0.69
TRIM39-205ENST00000396551 ZNF830Q96NB3 372 aaPredicted RBP19.38■□□□□ 0.69
TRIM39-205ENST00000396551 INCENPQ9NQS7 918 aa19.38■□□□□ 0.69
TRIM39-205ENST00000396551 TACC3Q9Y6A5 838 aa19.38■□□□□ 0.69
TRIM39-205ENST00000396551 B4E1Z4 1266 aa19.37■□□□□ 0.69
TRIM39-205ENST00000396551 DHX16O60231 1041 aaKnown RBP19.37■□□□□ 0.69
TRIM39-205ENST00000396551 MBD4O95243 580 aa19.37■□□□□ 0.69
TRIM39-205ENST00000396551 LUZP1Q86V48 1076 aa19.37■□□□□ 0.69
TRIM39-205ENST00000396551 C8orf76Q96K31 380 aa19.37■□□□□ 0.69
TRIM39-205ENST00000396551 CBX8Q9HC52 389 aa19.37■□□□□ 0.69
TRIM39-205ENST00000396551 ANGEL1Q9UNK9 670 aaKnown RBP19.37■□□□□ 0.69
TRIM39-205ENST00000396551 TIAM2Q8IVF5 1701 aa19.37■□□□□ 0.69
TRIM39-205ENST00000396551 IGHMBP2P38935 993 aaKnown RBP19.36■□□□□ 0.69
TRIM39-205ENST00000396551 SNW1Q13573 536 aaKnown RBP19.36■□□□□ 0.69
TRIM39-205ENST00000396551 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.36■□□□□ 0.69
TRIM39-205ENST00000396551 FBXO18Q8NFZ0 1043 aa19.36■□□□□ 0.69
TRIM39-205ENST00000396551 ARMT1Q9H993 441 aa19.36■□□□□ 0.69
TRIM39-205ENST00000396551 ZMYM6O95789 1325 aa19.36■□□□□ 0.69
TRIM39-205ENST00000396551 PATL2C9JE40 543 aaKnown RBP19.36■□□□□ 0.69
TRIM39-205ENST00000396551 CHRNDQ07001 517 aa19.36■□□□□ 0.69
TRIM39-205ENST00000396551 MAP3K12Q12852 859 aa19.36■□□□□ 0.69
TRIM39-205ENST00000396551 IFNL3Q8IZI9 196 aa19.36■□□□□ 0.69
TRIM39-205ENST00000396551 ZNF831Q5JPB2 1677 aa19.36■□□□□ 0.69
TRIM39-205ENST00000396551 CPLX1O14810 134 aa19.35■□□□□ 0.69
TRIM39-205ENST00000396551 ENGASEQ8NFI3 743 aa19.35■□□□□ 0.69
TRIM39-205ENST00000396551 LINC00116Q8NCU8 138 aa19.35■□□□□ 0.69
TRIM39-205ENST00000396551 IGDCC4Q8TDY8 1250 aa19.35■□□□□ 0.69
TRIM39-205ENST00000396551 TTC12Q9H892 705 aaPredicted RBP19.35■□□□□ 0.69
TRIM39-205ENST00000396551 RTEL1Q9NZ71 1219 aa19.35■□□□□ 0.69
TRIM39-205ENST00000396551 KIF28PB7ZC32 967 aa19.34■□□□□ 0.69
TRIM39-205ENST00000396551 RXRAP19793 462 aa19.34■□□□□ 0.69
TRIM39-205ENST00000396551 CTDSPL2Q05D32 466 aa19.34■□□□□ 0.69
TRIM39-205ENST00000396551 C3orf67Q6ZVT6 689 aa19.34■□□□□ 0.69
TRIM39-205ENST00000396551 SMARCC1Q92922 1105 aaPredicted RBP19.34■□□□□ 0.69
TRIM39-205ENST00000396551 GSG1L2A8MUP6 293 aa19.34■□□□□ 0.69
TRIM39-205ENST00000396551 APOA5Q6Q788 366 aa19.34■□□□□ 0.69
TRIM39-205ENST00000396551 SASS6Q6UVJ0 657 aa19.34■□□□□ 0.69
TRIM39-205ENST00000396551 ZMYND15Q9H091 742 aa19.34■□□□□ 0.69
TRIM39-205ENST00000396551 PRKAB2O43741 272 aa19.34■□□□□ 0.69
TRIM39-205ENST00000396551 PCDHA7Q9UN72 937 aa19.34■□□□□ 0.69
TRIM39-205ENST00000396551 POLR3DP05423 398 aaPredicted RBP19.33■□□□□ 0.69
TRIM39-205ENST00000396551 CDC27P30260 824 aa19.33■□□□□ 0.69
TRIM39-205ENST00000396551 LCORLQ8N3X6 602 aa19.33■□□□□ 0.69
TRIM39-205ENST00000396551 DNAJC25Q9H1X3 360 aa19.33■□□□□ 0.69
TRIM39-205ENST00000396551 CLIC4Q9Y696 253 aa19.33■□□□□ 0.69
TRIM39-205ENST00000396551 ME1P48163 572 aa19.33■□□□□ 0.68
TRIM39-205ENST00000396551 METAP2P50579 478 aaKnown RBP eCLIP19.33■□□□□ 0.68
TRIM39-205ENST00000396551 AIFM3Q96NN9 605 aa19.33■□□□□ 0.68
TRIM39-205ENST00000396551 NAPBQ9H115 298 aa19.33■□□□□ 0.68
TRIM39-205ENST00000396551 LY9Q9HBG7 655 aa19.33■□□□□ 0.68
TRIM39-205ENST00000396551 KCNQ4P56696 695 aa19.32■□□□□ 0.68
TRIM39-205ENST00000396551 ERFEQ4G0M1 354 aa19.32■□□□□ 0.68
TRIM39-205ENST00000396551 LINC00301Q8NCQ3 95 aa19.32■□□□□ 0.68
TRIM39-205ENST00000396551 TMEM87BQ96K49 555 aa19.32■□□□□ 0.68
TRIM39-205ENST00000396551 FSIP1Q8NA03 581 aa19.32■□□□□ 0.68
TRIM39-205ENST00000396551 ZNF652Q9Y2D9 606 aa19.32■□□□□ 0.68
TRIM39-205ENST00000396551 WTIPA6NIX2 430 aaPredicted RBP19.32■□□□□ 0.68
TRIM39-205ENST00000396551 KIF23Q02241 960 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms