RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 COA1Q9GZY4 146 aa15.21■□□□□ 0.03
TRIM39-204ENST00000396548 ALDH8A1Q9H2A2 487 aaPredicted RBP15.21■□□□□ 0.03
TRIM39-204ENST00000396548 ABCF2Q9UG63 623 aa15.21■□□□□ 0.03
TRIM39-204ENST00000396548 GOLGB1Q14789 3259 aaKnown RBP15.21■□□□□ 0.02
TRIM39-204ENST00000396548 SCN9AQ15858 1988 aa15.2■□□□□ 0.02
TRIM39-204ENST00000396548 C6orf229H3BNL8 230 aa15.2■□□□□ 0.02
TRIM39-204ENST00000396548 RNF20Q5VTR2 975 aa15.2■□□□□ 0.02
TRIM39-204ENST00000396548 MYH2Q9UKX2 1941 aa15.2■□□□□ 0.02
TRIM39-204ENST00000396548 ST18O60284 1047 aa15.2■□□□□ 0.02
TRIM39-204ENST00000396548 TGFB2P61812 414 aa15.2■□□□□ 0.02
TRIM39-204ENST00000396548 RUFY3Q7L099 469 aa15.2■□□□□ 0.02
TRIM39-204ENST00000396548 ERICH6Q7L0X2 663 aa15.2■□□□□ 0.02
TRIM39-204ENST00000396548 LCORLQ8N3X6 602 aa15.2■□□□□ 0.02
TRIM39-204ENST00000396548 UPF3BQ9BZI7 483 aaKnown RBP15.2■□□□□ 0.02
TRIM39-204ENST00000396548 NBPF3Q9H094 633 aa15.2■□□□□ 0.02
TRIM39-204ENST00000396548 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
TRIM39-204ENST00000396548 MBD4O95243 580 aa15.2■□□□□ 0.02
TRIM39-204ENST00000396548 ZKSCAN1P17029 563 aaPredicted RBP15.2■□□□□ 0.02
TRIM39-204ENST00000396548 TTLL5Q6EMB2 1281 aa15.2■□□□□ 0.02
TRIM39-204ENST00000396548 EPB41L4AQ9HCS5 686 aaPredicted RBP15.2■□□□□ 0.02
TRIM39-204ENST00000396548 RAI14Q9P0K7 980 aa15.2■□□□□ 0.02
TRIM39-204ENST00000396548 FER1L6Q2WGJ9 1857 aa15.19■□□□□ 0.02
TRIM39-204ENST00000396548 PATL2C9JE40 543 aaKnown RBP15.19■□□□□ 0.02
TRIM39-204ENST00000396548 CYP7A1P22680 504 aa15.19■□□□□ 0.02
TRIM39-204ENST00000396548 CHAF1AQ13111 956 aaPredicted RBP15.19■□□□□ 0.02
TRIM39-204ENST00000396548 ARMT1Q9H993 441 aa15.19■□□□□ 0.02
TRIM39-204ENST00000396548 FOCADQ5VW36 1801 aa15.19■□□□□ 0.02
TRIM39-204ENST00000396548 GSG1L2A8MUP6 293 aa15.19■□□□□ 0.02
TRIM39-204ENST00000396548 CASTP20810 708 aaKnown RBP15.19■□□□□ 0.02
TRIM39-204ENST00000396548 CC2D2BQ6DHV5 1058 aa15.19■□□□□ 0.02
TRIM39-204ENST00000396548 ZGPATQ8N5A5 531 aaKnown RBP15.19■□□□□ 0.02
TRIM39-204ENST00000396548 JAKMIP1Q96N16 626 aaKnown RBP15.19■□□□□ 0.02
TRIM39-204ENST00000396548 LAMB1P07942 1786 aa15.19■□□□□ 0.02
TRIM39-204ENST00000396548 FRAT2O75474 233 aaPredicted RBP15.18■□□□□ 0.02
TRIM39-204ENST00000396548 CPA1P15085 419 aa15.18■□□□□ 0.02
TRIM39-204ENST00000396548 AIDAQ96BJ3 306 aa15.18■□□□□ 0.02
TRIM39-204ENST00000396548 JAG2Q9Y219 1238 aa15.18■□□□□ 0.02
TRIM39-204ENST00000396548 DDX60LQ5H9U9 1706 aaKnown RBP15.18■□□□□ 0.02
TRIM39-204ENST00000396548 SPTY2D1Q68D10 685 aaPredicted RBP15.18■□□□□ 0.02
TRIM39-204ENST00000396548 NAA16Q6N069 864 aaPredicted RBP15.18■□□□□ 0.02
TRIM39-204ENST00000396548 TTLL6Q8N841 843 aa15.18■□□□□ 0.02
TRIM39-204ENST00000396548 KRT32Q14532 448 aa15.18■□□□□ 0.02
TRIM39-204ENST00000396548 COL4A5P29400 1685 aa15.17■□□□□ 0.02
TRIM39-204ENST00000396548 RIMBP2O15034 1052 aa15.17■□□□□ 0.02
TRIM39-204ENST00000396548 GNAT2P19087 354 aa15.17■□□□□ 0.02
TRIM39-204ENST00000396548 MCM2P49736 904 aa15.17■□□□□ 0.02
TRIM39-204ENST00000396548 GRIPAP1Q4V328 841 aa15.17■□□□□ 0.02
TRIM39-204ENST00000396548 ZC3H12CQ9C0D7 883 aaKnown RBP15.17■□□□□ 0.02
TRIM39-204ENST00000396548 CTNNA3Q9UI47 895 aa15.17■□□□□ 0.02
TRIM39-204ENST00000396548 PRKAB2O43741 272 aa15.17■□□□□ 0.02
TRIM39-204ENST00000396548 MIGA1Q8NAN2 632 aa15.17■□□□□ 0.02
TRIM39-204ENST00000396548 EYA3Q99504 573 aa15.17■□□□□ 0.02
TRIM39-204ENST00000396548 MAGEB6P1A0A0J9YX57 407 aa15.16■□□□□ 0.02
TRIM39-204ENST00000396548 E7EWF7 191 aa15.16■□□□□ 0.02
TRIM39-204ENST00000396548 RPS6KB1P23443 525 aa15.16■□□□□ 0.02
TRIM39-204ENST00000396548 PSMA5P28066 241 aa15.16■□□□□ 0.02
TRIM39-204ENST00000396548 AK2P54819 239 aa15.16■□□□□ 0.02
TRIM39-204ENST00000396548 IFNL3Q8IZI9 196 aa15.16■□□□□ 0.02
TRIM39-204ENST00000396548 ADAMTSL1Q8N6G6 1762 aa15.16■□□□□ 0.02
TRIM39-204ENST00000396548 POLD1P28340 1107 aa15.16■□□□□ 0.02
TRIM39-204ENST00000396548 CUL4AQ13619 759 aa15.16■□□□□ 0.02
TRIM39-204ENST00000396548 CYP46A1Q9Y6A2 500 aa15.16■□□□□ 0.02
TRIM39-204ENST00000396548 C21orf2O43822 256 aa15.16■□□□□ 0.02
TRIM39-204ENST00000396548 LDHBP07195 334 aaKnown RBP15.16■□□□□ 0.02
TRIM39-204ENST00000396548 DYNLL1P63167 89 aaKnown RBP15.16■□□□□ 0.02
TRIM39-204ENST00000396548 EXOSC10Q01780 885 aaKnown RBP15.16■□□□□ 0.02
TRIM39-204ENST00000396548 BAZ2AQ9UIF9 1905 aaKnown RBP15.16■□□□□ 0.02
TRIM39-204ENST00000396548 ARFGEF1Q9Y6D6 1849 aa15.15■□□□□ 0.02
TRIM39-204ENST00000396548 CERS5Q8N5B7 392 aa15.15■□□□□ 0.02
TRIM39-204ENST00000396548 FAM163AQ96GL9 167 aaPredicted RBP15.15■□□□□ 0.02
TRIM39-204ENST00000396548 NEK1Q96PY6 1258 aa15.15■□□□□ 0.02
TRIM39-204ENST00000396548 PSMD1Q99460 953 aa15.15■□□□□ 0.02
TRIM39-204ENST00000396548 TMX4Q9H1E5 349 aaPredicted RBP15.15■□□□□ 0.02
TRIM39-204ENST00000396548 DAXXQ9UER7 740 aaPredicted RBP15.15■□□□□ 0.02
TRIM39-204ENST00000396548 TACC3Q9Y6A5 838 aa15.15■□□□□ 0.02
TRIM39-204ENST00000396548 PSDA5PKW4 1024 aaPredicted RBP15.15■□□□□ 0.02
TRIM39-204ENST00000396548 KIAA2012Q0VF49 1180 aa15.15■□□□□ 0.02
TRIM39-204ENST00000396548 TBC1D22AQ8WUA7 517 aa15.15■□□□□ 0.02
TRIM39-204ENST00000396548 TMX3Q96JJ7 454 aa15.15■□□□□ 0.02
TRIM39-204ENST00000396548 TOB2Q14106 344 aaPredicted RBP15.14■□□□□ 0.01
TRIM39-204ENST00000396548 DOK7Q18PE1 504 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 PDRG1Q9NUG6 133 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 SUGT1Q9Y2Z0 365 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 CD2APQ9Y5K6 639 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 PPP4CP60510 307 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 IMMTQ16891 758 aaKnown RBP15.14■□□□□ 0.01
TRIM39-204ENST00000396548 PODNQ7Z5L7 613 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 AGXT2Q9BYV1 514 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 SLC4A4Q9Y6R1 1079 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 ECM29Q5VYK3 1845 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 NAV1Q8NEY1 1877 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 GAKO14976 1311 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 FKBP1AP62942 108 aaKnown RBP15.14■□□□□ 0.01
TRIM39-204ENST00000396548 FBXL16Q8N461 479 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 NKX2-3Q8TAU0 364 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 KCNQ5Q9NR82 932 aa15.14■□□□□ 0.01
TRIM39-204ENST00000396548 ZNF219Q9P2Y4 722 aaPredicted RBP15.14■□□□□ 0.01
TRIM39-204ENST00000396548 MROH7-TTC4A0A0A0MT08 1334 aa15.13■□□□□ 0.01
TRIM39-204ENST00000396548 GTF2IP78347 998 aa15.13■□□□□ 0.01
TRIM39-204ENST00000396548 MFSD14BQ5SR56 506 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms