RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 TRIM42Q8IWZ5 723 aa8.52□□□□□ -1.05
CDKN3-203ENST00000395577 CACTIN-AS1Q8N1I8 211 aa8.52□□□□□ -1.05
CDKN3-203ENST00000395577 PMFBP1Q8TBY8 1022 aa8.52□□□□□ -1.05
CDKN3-203ENST00000395577 DDX54Q8TDD1 881 aaKnown RBP8.52□□□□□ -1.05
CDKN3-203ENST00000395577 NKD1Q969G9 470 aa8.52□□□□□ -1.05
CDKN3-203ENST00000395577 COL25A1Q9BXS0 654 aaPredicted RBP8.52□□□□□ -1.05
CDKN3-203ENST00000395577 MIR1-1HGQ9H1L0 117 aa8.52□□□□□ -1.05
CDKN3-203ENST00000395577 CBX8Q9HC52 389 aa8.52□□□□□ -1.05
CDKN3-203ENST00000395577 GDF2Q9UK05 429 aaPredicted RBP8.52□□□□□ -1.05
CDKN3-203ENST00000395577 EPHA1P21709 976 aa8.51□□□□□ -1.05
CDKN3-203ENST00000395577 ARNTP27540 789 aa8.51□□□□□ -1.05
CDKN3-203ENST00000395577 COL9A2Q14055 689 aaPredicted RBP8.51□□□□□ -1.05
CDKN3-203ENST00000395577 SOGA3Q5TF21 947 aa8.51□□□□□ -1.05
CDKN3-203ENST00000395577 BNC2Q6ZN30 1099 aaPredicted RBP8.51□□□□□ -1.05
CDKN3-203ENST00000395577 FAM196AQ6ZSG2 479 aa8.51□□□□□ -1.05
CDKN3-203ENST00000395577 CCDC84Q86UT8 332 aaPredicted RBP8.51□□□□□ -1.05
CDKN3-203ENST00000395577 STK35Q8TDR2 534 aa8.51□□□□□ -1.05
CDKN3-203ENST00000395577 JARID2Q92833 1246 aaPredicted RBP8.51□□□□□ -1.05
CDKN3-203ENST00000395577 EMILIN2Q9BXX0 1053 aa8.51□□□□□ -1.05
CDKN3-203ENST00000395577 H3BRJ5 948 aa8.5□□□□□ -1.05
CDKN3-203ENST00000395577 SOX1O00570 391 aaPredicted RBP8.5□□□□□ -1.05
CDKN3-203ENST00000395577 TLR3O15455 904 aaKnown RBP8.5□□□□□ -1.05
CDKN3-203ENST00000395577 CDC25BP30305 580 aa8.5□□□□□ -1.05
CDKN3-203ENST00000395577 CRKP46108 304 aa8.5□□□□□ -1.05
CDKN3-203ENST00000395577 SOX9P48436 509 aa8.5□□□□□ -1.05
CDKN3-203ENST00000395577 RNFT1Q5M7Z0 435 aa8.5□□□□□ -1.05
CDKN3-203ENST00000395577 LLGL2Q6P1M3 1020 aa8.5□□□□□ -1.05
CDKN3-203ENST00000395577 SLCO4C1Q6ZQN7 724 aa8.5□□□□□ -1.05
CDKN3-203ENST00000395577 IL22RA1Q8N6P7 574 aa8.5□□□□□ -1.05
CDKN3-203ENST00000395577 GRIN3AQ8TCU5 1115 aa8.5□□□□□ -1.05
CDKN3-203ENST00000395577 JPH1Q9HDC5 661 aaPredicted RBP8.5□□□□□ -1.05
CDKN3-203ENST00000395577 ROBO2Q9HCK4 1378 aa8.49□□□□□ -1.05
CDKN3-203ENST00000395577 F13A1P00488 732 aa8.49□□□□□ -1.05
CDKN3-203ENST00000395577 VSIG8P0DPA2 414 aa8.49□□□□□ -1.05
CDKN3-203ENST00000395577 NFX1Q12986 1120 aaKnown RBP8.49□□□□□ -1.05
CDKN3-203ENST00000395577 SEPT6Q14141 434 aa8.49□□□□□ -1.05
CDKN3-203ENST00000395577 SEZ6Q53EL9 994 aa8.49□□□□□ -1.05
CDKN3-203ENST00000395577 DIEXFQ68CQ4 756 aaKnown RBP8.49□□□□□ -1.05
CDKN3-203ENST00000395577 FBXO27Q8NI29 283 aa8.49□□□□□ -1.05
CDKN3-203ENST00000395577 CPLX3Q8WVH0 158 aa8.49□□□□□ -1.05
CDKN3-203ENST00000395577 GATAD2BQ8WXI9 593 aa8.49□□□□□ -1.05
CDKN3-203ENST00000395577 STRIP2Q9ULQ0 834 aa8.49□□□□□ -1.05
CDKN3-203ENST00000395577 STARD13Q9Y3M8 1113 aa8.49□□□□□ -1.05
CDKN3-203ENST00000395577 EPXP11678 715 aa8.48□□□□□ -1.05
CDKN3-203ENST00000395577 GRIK5Q16478 980 aa8.48□□□□□ -1.05
CDKN3-203ENST00000395577 CCDC144BQ3MJ40 725 aa8.48□□□□□ -1.05
CDKN3-203ENST00000395577 C20orf204Q6ZNR8 217 aa8.48□□□□□ -1.05
CDKN3-203ENST00000395577 SLITRK4Q8IW52 837 aa8.48□□□□□ -1.05
CDKN3-203ENST00000395577 SLC7A3Q8WY07 619 aa8.48□□□□□ -1.05
CDKN3-203ENST00000395577 PPME1Q9Y570 386 aa8.48□□□□□ -1.05
CDKN3-203ENST00000395577 ALBP02768 609 aa8.47□□□□□ -1.05
CDKN3-203ENST00000395577 GSTM4Q03013 218 aa8.47□□□□□ -1.05
CDKN3-203ENST00000395577 SRSF11Q05519 484 aaKnown RBP8.47□□□□□ -1.05
CDKN3-203ENST00000395577 AP3B2Q13367 1082 aa8.47□□□□□ -1.05
CDKN3-203ENST00000395577 MPP2Q14168 576 aa8.47□□□□□ -1.05
CDKN3-203ENST00000395577 FAM117BQ6P1L5 589 aa8.47□□□□□ -1.05
CDKN3-203ENST00000395577 TXNDC11Q6PKC3 985 aa8.47□□□□□ -1.05
CDKN3-203ENST00000395577 CKAP2LQ8IYA6 745 aa8.47□□□□□ -1.05
CDKN3-203ENST00000395577 LRRC3Q9BY71 257 aa8.47□□□□□ -1.05
CDKN3-203ENST00000395577 SOX17Q9H6I2 414 aaPredicted RBP8.47□□□□□ -1.05
CDKN3-203ENST00000395577 ZNF408Q9H9D4 720 aa8.47□□□□□ -1.05
CDKN3-203ENST00000395577 MRVI1Q9Y6F6 885 aa8.47□□□□□ -1.05
CDKN3-203ENST00000395577 FAM221AA4D161 298 aa8.46□□□□□ -1.06
CDKN3-203ENST00000395577 LINC01387J3KSC0 135 aa8.46□□□□□ -1.06
CDKN3-203ENST00000395577 SMARCA5O60264 1052 aaPredicted RBP8.46□□□□□ -1.06
CDKN3-203ENST00000395577 MCM4P33991 863 aa8.46□□□□□ -1.06
CDKN3-203ENST00000395577 BAG6P46379 1132 aa8.46□□□□□ -1.06
CDKN3-203ENST00000395577 ARL4DP49703 201 aa8.46□□□□□ -1.06
CDKN3-203ENST00000395577 CWF19L2Q2TBE0 894 aaKnown RBP8.46□□□□□ -1.06
CDKN3-203ENST00000395577 HGSNATQ68CP4 663 aa8.46□□□□□ -1.06
CDKN3-203ENST00000395577 KANK3Q6NY19 840 aa8.46□□□□□ -1.06
CDKN3-203ENST00000395577 PDZD3Q86UT5 571 aa8.46□□□□□ -1.06
CDKN3-203ENST00000395577 FAM177A1Q8N128 213 aaPredicted RBP8.46□□□□□ -1.06
CDKN3-203ENST00000395577 SLC16A10Q8TF71 515 aa8.46□□□□□ -1.06
CDKN3-203ENST00000395577 GAL3ST3Q96A11 431 aa8.46□□□□□ -1.06
CDKN3-203ENST00000395577 ACDQ96AP0 544 aa8.46□□□□□ -1.06
CDKN3-203ENST00000395577 SRRTQ9BXP5 876 aaKnown RBP8.46□□□□□ -1.06
CDKN3-203ENST00000395577 RB1CC1Q8TDY2 1594 aa8.46□□□□□ -1.06
CDKN3-203ENST00000395577 LILRB5O75023 590 aa8.45□□□□□ -1.06
CDKN3-203ENST00000395577 CILPO75339 1184 aa8.45□□□□□ -1.06
CDKN3-203ENST00000395577 BPNT1O95861 308 aa8.45□□□□□ -1.06
CDKN3-203ENST00000395577 GSTP1P09211 210 aaKnown RBP8.45□□□□□ -1.06
CDKN3-203ENST00000395577 ETFBP38117 255 aa8.45□□□□□ -1.06
CDKN3-203ENST00000395577 AFF1P51825 1210 aaKnown RBP8.45□□□□□ -1.06
CDKN3-203ENST00000395577 PIP4K2BP78356 416 aa8.45□□□□□ -1.06
CDKN3-203ENST00000395577 ZNF252P-AS1Q0IIN9 211 aa8.45□□□□□ -1.06
CDKN3-203ENST00000395577 C19orf57Q0VDD7 668 aa8.45□□□□□ -1.06
CDKN3-203ENST00000395577 KCNB2Q92953 911 aa8.45□□□□□ -1.06
CDKN3-203ENST00000395577 OSBPL2Q9H1P3 480 aa8.45□□□□□ -1.06
CDKN3-203ENST00000395577 ZSWIM4Q9H7M6 989 aa8.45□□□□□ -1.06
CDKN3-203ENST00000395577 ERBB4Q15303 1308 aa8.45□□□□□ -1.06
CDKN3-203ENST00000395577 M0R082 166 aa8.44□□□□□ -1.06
CDKN3-203ENST00000395577 TERTO14746 1132 aaKnown RBP8.44□□□□□ -1.06
CDKN3-203ENST00000395577 TRIM37O94972 964 aa8.44□□□□□ -1.06
CDKN3-203ENST00000395577 ADAMTS2O95450 1211 aa8.44□□□□□ -1.06
CDKN3-203ENST00000395577 ZNF165P49910 485 aa8.44□□□□□ -1.06
CDKN3-203ENST00000395577 MAP1SQ66K74 1059 aaPredicted RBP8.44□□□□□ -1.06
CDKN3-203ENST00000395577 GIMAP6Q6P9H5 292 aa8.44□□□□□ -1.06
CDKN3-203ENST00000395577 MPRIPQ6WCQ1 1025 aa8.44□□□□□ -1.06
CDKN3-203ENST00000395577 CCDC81Q6ZN84 652 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms