RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 DISP2A7MBM2 1401 aa17.47■□□□□ 0.39
SHTN1-204ENST00000392903 CCDC69A6NI79 296 aa17.47■□□□□ 0.39
SHTN1-204ENST00000392903 CAPN2P17655 700 aa17.47■□□□□ 0.39
SHTN1-204ENST00000392903 CTSWP56202 376 aa17.47■□□□□ 0.39
SHTN1-204ENST00000392903 HAND2P61296 217 aa17.47■□□□□ 0.39
SHTN1-204ENST00000392903 BCL11BQ9C0K0 894 aaPredicted RBP17.47■□□□□ 0.39
SHTN1-204ENST00000392903 CCT2P78371 535 aaKnown RBP17.46■□□□□ 0.39
SHTN1-204ENST00000392903 BICD2Q8TD16 824 aa17.46■□□□□ 0.39
SHTN1-204ENST00000392903 ANKRD18BA2A2Z9 1011 aa17.46■□□□□ 0.38
SHTN1-204ENST00000392903 FOSBP53539 338 aa17.46■□□□□ 0.38
SHTN1-204ENST00000392903 FBXO3Q9UK99 471 aa17.46■□□□□ 0.38
SHTN1-204ENST00000392903 FHOD1Q9Y613 1164 aa17.46■□□□□ 0.38
SHTN1-204ENST00000392903 LAMA4Q16363 1823 aa17.45■□□□□ 0.38
SHTN1-204ENST00000392903 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.45■□□□□ 0.38
SHTN1-204ENST00000392903 PUS7LQ9H0K6 701 aaKnown RBP17.45■□□□□ 0.38
SHTN1-204ENST00000392903 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.45■□□□□ 0.38
SHTN1-204ENST00000392903 HMGB1P09429 215 aaKnown RBP17.45■□□□□ 0.38
SHTN1-204ENST00000392903 STX1AQ16623 288 aa17.45■□□□□ 0.38
SHTN1-204ENST00000392903 HELBQ8NG08 1087 aaPredicted RBP17.45■□□□□ 0.38
SHTN1-204ENST00000392903 NCOA5Q9HCD5 579 aaKnown RBP17.45■□□□□ 0.38
SHTN1-204ENST00000392903 TRMT1Q9NXH9 659 aaKnown RBP17.45■□□□□ 0.38
SHTN1-204ENST00000392903 UBN2Q6ZU65 1347 aa17.44■□□□□ 0.38
SHTN1-204ENST00000392903 CDHR2Q9BYE9 1310 aa17.44■□□□□ 0.38
SHTN1-204ENST00000392903 MCAMP43121 646 aa17.44■□□□□ 0.38
SHTN1-204ENST00000392903 C11orf57Q6ZUT1 292 aaPredicted RBP17.44■□□□□ 0.38
SHTN1-204ENST00000392903 CTAGE5O15320 804 aa17.43■□□□□ 0.38
SHTN1-204ENST00000392903 GSDMDP57764 484 aa17.43■□□□□ 0.38
SHTN1-204ENST00000392903 EXOSC10Q01780 885 aaKnown RBP17.43■□□□□ 0.38
SHTN1-204ENST00000392903 COL14A1Q05707 1796 aaKnown RBP17.43■□□□□ 0.38
SHTN1-204ENST00000392903 H3BQV1 296 aa17.43■□□□□ 0.38
SHTN1-204ENST00000392903 FOXP2O15409 715 aa17.43■□□□□ 0.38
SHTN1-204ENST00000392903 CCDC93Q567U6 631 aa17.43■□□□□ 0.38
SHTN1-204ENST00000392903 IFFO2Q5TF58 517 aa17.43■□□□□ 0.38
SHTN1-204ENST00000392903 GPHNQ9NQX3 736 aaPredicted RBP17.43■□□□□ 0.38
SHTN1-204ENST00000392903 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.43■□□□□ 0.38
SHTN1-204ENST00000392903 ROBO1Q9Y6N7 1651 aa17.43■□□□□ 0.38
SHTN1-204ENST00000392903 RIC1Q4ADV7 1423 aa17.42■□□□□ 0.38
SHTN1-204ENST00000392903 FGAP02671 866 aa17.42■□□□□ 0.38
SHTN1-204ENST00000392903 IL6STP40189 918 aaPredicted RBP17.42■□□□□ 0.38
SHTN1-204ENST00000392903 HNRNPH2P55795 449 aaKnown RBP17.42■□□□□ 0.38
SHTN1-204ENST00000392903 DDB1Q16531 1140 aa17.42■□□□□ 0.38
SHTN1-204ENST00000392903 NUP98P52948 1817 aa17.42■□□□□ 0.38
SHTN1-204ENST00000392903 NUTM2BA6NNL0 878 aaPredicted RBP17.42■□□□□ 0.38
SHTN1-204ENST00000392903 NUTM2EB1AL46 878 aaPredicted RBP17.42■□□□□ 0.38
SHTN1-204ENST00000392903 PNMA6AP0CW24 399 aaPredicted RBP17.42■□□□□ 0.38
SHTN1-204ENST00000392903 CLCN6P51797 869 aa17.42■□□□□ 0.38
SHTN1-204ENST00000392903 SNW1Q13573 536 aaKnown RBP17.42■□□□□ 0.38
SHTN1-204ENST00000392903 ERCC6LQ2NKX8 1250 aa17.42■□□□□ 0.38
SHTN1-204ENST00000392903 FILIP1Q7Z7B0 1213 aa17.42■□□□□ 0.38
SHTN1-204ENST00000392903 NUTM2AQ8IVF1 878 aaPredicted RBP17.42■□□□□ 0.38
SHTN1-204ENST00000392903 SNAP23O00161 211 aa17.41■□□□□ 0.38
SHTN1-204ENST00000392903 PDE8AO60658 829 aa17.41■□□□□ 0.38
SHTN1-204ENST00000392903 PFKFB2O60825 505 aa17.41■□□□□ 0.38
SHTN1-204ENST00000392903 ATP6V1AP38606 617 aa17.41■□□□□ 0.38
SHTN1-204ENST00000392903 LRRFIP1Q32MZ4 808 aaKnown RBP17.41■□□□□ 0.38
SHTN1-204ENST00000392903 OSBPL5Q9H0X9 879 aaPredicted RBP17.41■□□□□ 0.38
SHTN1-204ENST00000392903 CTDNEP1O95476 244 aa17.41■□□□□ 0.38
SHTN1-204ENST00000392903 TUBB4AP04350 444 aa17.41■□□□□ 0.38
SHTN1-204ENST00000392903 LRP6O75581 1613 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 BECN2A8MW95 431 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 PDE8BO95263 885 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 ZFYP08048 801 aaPredicted RBP17.4■□□□□ 0.38
SHTN1-204ENST00000392903 PLA2G4AP47712 749 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 CEBPZQ03701 1054 aaKnown RBP17.4■□□□□ 0.38
SHTN1-204ENST00000392903 RESTQ13127 1097 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 SLC9C2Q5TAH2 1124 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 DHX40Q8IX18 779 aaKnown RBP17.4■□□□□ 0.38
SHTN1-204ENST00000392903 NSUN7Q8NE18 718 aaKnown RBP17.4■□□□□ 0.38
SHTN1-204ENST00000392903 IMPACTQ9P2X3 320 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 ERVV-1B6SEH8 477 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 GPAA1O43292 621 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 IDH1O75874 414 aaKnown RBP17.4■□□□□ 0.38
SHTN1-204ENST00000392903 ZRANB2O95218 330 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHTN1-204ENST00000392903 KCNJ6P48051 423 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 SUSD4Q5VX71 490 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 TICAM2Q86XR7 235 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 ZNF34Q8IZ26 560 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 VGLL2Q8N8G2 317 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 APPBP2Q92624 585 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 CFAP45Q9UL16 551 aa17.4■□□□□ 0.38
SHTN1-204ENST00000392903 PDIA3P30101 505 aaKnown RBP17.39■□□□□ 0.37
SHTN1-204ENST00000392903 PHKA1P46020 1223 aa17.39■□□□□ 0.37
SHTN1-204ENST00000392903 IMMTQ16891 758 aaKnown RBP17.39■□□□□ 0.37
SHTN1-204ENST00000392903 INTS5Q6P9B9 1019 aaKnown RBP17.39■□□□□ 0.37
SHTN1-204ENST00000392903 COL16A1Q07092 1604 aaPredicted RBP17.39■□□□□ 0.37
SHTN1-204ENST00000392903 MYH3P11055 1940 aa17.39■□□□□ 0.37
SHTN1-204ENST00000392903 PTPDC1A2A3K4 754 aa17.39■□□□□ 0.37
SHTN1-204ENST00000392903 PSDA5PKW4 1024 aaPredicted RBP17.39■□□□□ 0.37
SHTN1-204ENST00000392903 NPHP1O15259 732 aa17.39■□□□□ 0.37
SHTN1-204ENST00000392903 CRKLP46109 303 aaKnown RBP17.39■□□□□ 0.37
SHTN1-204ENST00000392903 E4F1Q66K89 784 aaPredicted RBP17.39■□□□□ 0.37
SHTN1-204ENST00000392903 SMARCC2Q8TAQ2 1214 aa17.39■□□□□ 0.37
SHTN1-204ENST00000392903 AGXT2Q9BYV1 514 aa17.39■□□□□ 0.37
SHTN1-204ENST00000392903 ZSCAN16Q9H4T2 348 aaPredicted RBP17.39■□□□□ 0.37
SHTN1-204ENST00000392903 SPEF2Q9C093 1822 aa17.39■□□□□ 0.37
SHTN1-204ENST00000392903 EIF5P55010 431 aaKnown RBP17.38■□□□□ 0.37
SHTN1-204ENST00000392903 GUCY1B3Q02153 619 aa17.38■□□□□ 0.37
SHTN1-204ENST00000392903 CCDC102BQ68D86 513 aa17.38■□□□□ 0.37
SHTN1-204ENST00000392903 MARCH10Q8NA82 808 aaPredicted RBP17.38■□□□□ 0.37
SHTN1-204ENST00000392903 PPP1R13BQ96KQ4 1090 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms