RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 MB21D2Q8IYB1 491 aaPredicted RBP23.69■■□□□ 1.38
PTPN11-202ENST00000392597 MAGEB6Q8N7X4 407 aa23.69■■□□□ 1.38
PTPN11-202ENST00000392597 PNPLA7Q6ZV29 1317 aa23.69■■□□□ 1.38
PTPN11-202ENST00000392597 HAND2P61296 217 aa23.68■■□□□ 1.38
PTPN11-202ENST00000392597 SCRN1Q12765 414 aa23.68■■□□□ 1.38
PTPN11-202ENST00000392597 SMARCC2Q8TAQ2 1214 aa23.68■■□□□ 1.38
PTPN11-202ENST00000392597 ANKRD2Q9GZV1 360 aa23.68■■□□□ 1.38
PTPN11-202ENST00000392597 CAVIN4Q5BKX8 364 aa23.68■■□□□ 1.38
PTPN11-202ENST00000392597 USP48Q86UV5 1035 aa23.68■■□□□ 1.38
PTPN11-202ENST00000392597 PATL2C9JE40 543 aaKnown RBP23.67■■□□□ 1.38
PTPN11-202ENST00000392597 XRCC6P12956 609 aaKnown RBP eCLIP23.67■■□□□ 1.388e-6■■□□□ 12.6
PTPN11-202ENST00000392597 GNAT2P19087 354 aa23.67■■□□□ 1.38
PTPN11-202ENST00000392597 APOBRQ0VD83 1088 aa23.67■■□□□ 1.38
PTPN11-202ENST00000392597 ZSCAN23Q3MJ62 389 aa23.67■■□□□ 1.38
PTPN11-202ENST00000392597 RALYLQ86SE5 291 aaKnown RBP23.67■■□□□ 1.38
PTPN11-202ENST00000392597 GRPEL1Q9HAV7 217 aa23.67■■□□□ 1.38
PTPN11-202ENST00000392597 SEMA3EO15041 775 aa23.66■■□□□ 1.38
PTPN11-202ENST00000392597 HMGN5P82970 282 aaKnown RBP23.66■■□□□ 1.38
PTPN11-202ENST00000392597 ZBTB22O15209 634 aa23.66■■□□□ 1.38
PTPN11-202ENST00000392597 KIF3AQ9Y496 699 aa23.66■■□□□ 1.38
PTPN11-202ENST00000392597 SOCS7O14512 581 aa23.65■■□□□ 1.38
PTPN11-202ENST00000392597 PRC1O43663 620 aa23.65■■□□□ 1.38
PTPN11-202ENST00000392597 APPP05067 770 aa23.65■■□□□ 1.38
PTPN11-202ENST00000392597 PDIA3P30101 505 aaKnown RBP23.65■■□□□ 1.38
PTPN11-202ENST00000392597 TRDNQ13061 729 aa23.65■■□□□ 1.38
PTPN11-202ENST00000392597 FOXD4L6Q3SYB3 417 aaPredicted RBP23.65■■□□□ 1.38
PTPN11-202ENST00000392597 FOXD4L3Q6VB84 417 aaPredicted RBP23.65■■□□□ 1.38
PTPN11-202ENST00000392597 GAS2L3Q86XJ1 694 aa23.65■■□□□ 1.38
PTPN11-202ENST00000392597 LRP2BPQ9P2M1 347 aa23.65■■□□□ 1.38
PTPN11-202ENST00000392597 DENND2AQ9ULE3 1009 aa23.65■■□□□ 1.38
PTPN11-202ENST00000392597 CNPY2Q9Y2B0 182 aa23.65■■□□□ 1.38
PTPN11-202ENST00000392597 PDS5AQ29RF7 1337 aaKnown RBP23.65■■□□□ 1.38
PTPN11-202ENST00000392597 MBD4O95243 580 aa23.64■■□□□ 1.38
PTPN11-202ENST00000392597 TM4SF1P30408 202 aa23.64■■□□□ 1.38
PTPN11-202ENST00000392597 CDC37L1Q7L3B6 337 aa23.64■■□□□ 1.38
PTPN11-202ENST00000392597 COL23A1Q86Y22 540 aaPredicted RBP23.64■■□□□ 1.38
PTPN11-202ENST00000392597 NSUN7Q8NE18 718 aaKnown RBP23.64■■□□□ 1.38
PTPN11-202ENST00000392597 SYAP1Q96A49 352 aaPredicted RBP23.64■■□□□ 1.38
PTPN11-202ENST00000392597 NBPF3Q9H094 633 aa23.64■■□□□ 1.38
PTPN11-202ENST00000392597 JAK2O60674 1132 aa23.64■■□□□ 1.37
PTPN11-202ENST00000392597 GYG1P46976 350 aa23.64■■□□□ 1.37
PTPN11-202ENST00000392597 NFIXQ14938 502 aa23.64■■□□□ 1.37
PTPN11-202ENST00000392597 FBXO33Q7Z6M2 555 aa23.64■■□□□ 1.37
PTPN11-202ENST00000392597 TNRC6CQ9HCJ0 1690 aaKnown RBP23.63■■□□□ 1.37
PTPN11-202ENST00000392597 VPS37DQ86XT2 251 aa23.63■■□□□ 1.37
PTPN11-202ENST00000392597 FAM84BQ96KN1 310 aaPredicted RBP23.63■■□□□ 1.37
PTPN11-202ENST00000392597 GDPD2Q9HCC8 539 aa23.63■■□□□ 1.37
PTPN11-202ENST00000392597 UBE2HP62256 183 aa23.62■■□□□ 1.37
PTPN11-202ENST00000392597 IFNL3Q8IZI9 196 aa23.62■■□□□ 1.37
PTPN11-202ENST00000392597 TMEM63CQ9P1W3 806 aa23.62■■□□□ 1.37
PTPN11-202ENST00000392597 NSFL1CQ9UNZ2 370 aaKnown RBP23.62■■□□□ 1.37
PTPN11-202ENST00000392597 COL1A1P02452 1464 aaPredicted RBP23.62■■□□□ 1.37
PTPN11-202ENST00000392597 TIAM2Q8IVF5 1701 aa23.62■■□□□ 1.37
PTPN11-202ENST00000392597 NPHP1O15259 732 aa23.62■■□□□ 1.37
PTPN11-202ENST00000392597 ANTXR2P58335 489 aa23.62■■□□□ 1.37
PTPN11-202ENST00000392597 DNM1Q05193 864 aaKnown RBP23.62■■□□□ 1.37
PTPN11-202ENST00000392597 CHST3Q7LGC8 479 aa23.62■■□□□ 1.37
PTPN11-202ENST00000392597 TBC1D10CQ8IV04 446 aa23.62■■□□□ 1.37
PTPN11-202ENST00000392597 CNBD1Q8NA66 436 aa23.62■■□□□ 1.37
PTPN11-202ENST00000392597 FAM184AQ8NB25 1140 aa23.62■■□□□ 1.37
PTPN11-202ENST00000392597 NACAP1Q9BZK3 213 aa23.62■■□□□ 1.37
PTPN11-202ENST00000392597 SALL1Q9NSC2 1324 aa23.62■■□□□ 1.37
PTPN11-202ENST00000392597 DTNBO60941 627 aa23.61■■□□□ 1.37
PTPN11-202ENST00000392597 NAPBQ9H115 298 aa23.61■■□□□ 1.37
PTPN11-202ENST00000392597 ARMT1Q9H993 441 aa23.61■■□□□ 1.37
PTPN11-202ENST00000392597 EPB41L4AQ9HCS5 686 aaPredicted RBP23.61■■□□□ 1.37
PTPN11-202ENST00000392597 CHD4Q14839 1912 aa23.6■■□□□ 1.37
PTPN11-202ENST00000392597 GSG1L2A8MUP6 293 aa23.6■■□□□ 1.37
PTPN11-202ENST00000392597 GADD45BO75293 160 aaPredicted RBP23.6■■□□□ 1.37
PTPN11-202ENST00000392597 CTDNEP1O95476 244 aa23.6■■□□□ 1.37
PTPN11-202ENST00000392597 TMED8Q6PL24 325 aaPredicted RBP23.6■■□□□ 1.37
PTPN11-202ENST00000392597 RBM27Q9P2N5 1060 aaKnown RBP23.6■■□□□ 1.37
PTPN11-202ENST00000392597 PTPDC1A2A3K4 754 aa23.6■■□□□ 1.37
PTPN11-202ENST00000392597 DHX16O60231 1041 aaKnown RBP23.6■■□□□ 1.37
PTPN11-202ENST00000392597 KRT85P78386 507 aa23.6■■□□□ 1.37
PTPN11-202ENST00000392597 NAA16Q6N069 864 aaPredicted RBP23.6■■□□□ 1.37
PTPN11-202ENST00000392597 MYH13Q9UKX3 1938 aa23.6■■□□□ 1.37
PTPN11-202ENST00000392597 GYS1P13807 737 aa23.59■■□□□ 1.37
PTPN11-202ENST00000392597 ZSCAN16Q9H4T2 348 aaPredicted RBP23.59■■□□□ 1.37
PTPN11-202ENST00000392597 BRPF3Q9ULD4 1205 aa23.59■■□□□ 1.37
PTPN11-202ENST00000392597 CACNA1SQ13698 1873 aa23.59■■□□□ 1.37
PTPN11-202ENST00000392597 FIBPO43427 364 aa23.58■■□□□ 1.37
PTPN11-202ENST00000392597 ELP1O95163 1332 aa23.58■■□□□ 1.37
PTPN11-202ENST00000392597 CYP7A1P22680 504 aa23.58■■□□□ 1.37
PTPN11-202ENST00000392597 CCT2P78371 535 aaKnown RBP23.58■■□□□ 1.37
PTPN11-202ENST00000392597 LCORLQ8N3X6 602 aa23.58■■□□□ 1.37
PTPN11-202ENST00000392597 CNNM2Q9H8M5 875 aa23.58■■□□□ 1.37
PTPN11-202ENST00000392597 IQSEC3Q9UPP2 1182 aaPredicted RBP23.58■■□□□ 1.37
PTPN11-202ENST00000392597 WTIPA6NIX2 430 aaPredicted RBP23.58■■□□□ 1.36
PTPN11-202ENST00000392597 H3BQV1 296 aa23.58■■□□□ 1.36
PTPN11-202ENST00000392597 GRAPQ13588 217 aa23.58■■□□□ 1.36
PTPN11-202ENST00000392597 IFFO2Q5TF58 517 aa23.58■■□□□ 1.36
PTPN11-202ENST00000392597 CCDC24Q8N4L8 307 aa23.58■■□□□ 1.36
PTPN11-202ENST00000392597 GRAPLQ8TC17 118 aaPredicted RBP23.58■■□□□ 1.36
PTPN11-202ENST00000392597 DDX11Q96FC9 970 aa23.58■■□□□ 1.36
PTPN11-202ENST00000392597 TMEM87BQ96K49 555 aa23.58■■□□□ 1.36
PTPN11-202ENST00000392597 ABCF2Q9UG63 623 aa23.58■■□□□ 1.36
PTPN11-202ENST00000392597 ANGEL1Q9UNK9 670 aaKnown RBP23.58■■□□□ 1.36
PTPN11-202ENST00000392597 SLC4A4Q9Y6R1 1079 aa23.58■■□□□ 1.36
PTPN11-202ENST00000392597 HIBADHP31937 336 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms