RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ZNF532Q9HCE3 1301 aa17.47■□□□□ 0.39
SCFD2-201ENST00000388940 A0A1W2PQ27 194 aa17.47■□□□□ 0.39
SCFD2-201ENST00000388940 A0A1W2PQ64 194 aa17.47■□□□□ 0.39
SCFD2-201ENST00000388940 A0A1W2PQD8 194 aa17.47■□□□□ 0.39
SCFD2-201ENST00000388940 GUCY1B3Q02153 619 aa17.47■□□□□ 0.39
SCFD2-201ENST00000388940 BRAPQ7Z569 592 aa17.47■□□□□ 0.39
SCFD2-201ENST00000388940 MPNDQ8N594 471 aa17.47■□□□□ 0.39
SCFD2-201ENST00000388940 ORC3Q9UBD5 711 aaPredicted RBP17.47■□□□□ 0.39
SCFD2-201ENST00000388940 ROBO1Q9Y6N7 1651 aa17.47■□□□□ 0.39
SCFD2-201ENST00000388940 ADALQ6DHV7 355 aa17.46■□□□□ 0.39
SCFD2-201ENST00000388940 PLA2G4DQ86XP0 818 aa17.46■□□□□ 0.39
SCFD2-201ENST00000388940 ANGEL1Q9UNK9 670 aaKnown RBP17.46■□□□□ 0.39
SCFD2-201ENST00000388940 CPLX1O14810 134 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 IDH1O75874 414 aaKnown RBP17.45■□□□□ 0.38
SCFD2-201ENST00000388940 YEATS4O95619 227 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 SLC5A1P13866 664 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 INTS5Q6P9B9 1019 aaKnown RBP17.45■□□□□ 0.38
SCFD2-201ENST00000388940 KIAA1524Q8TCG1 905 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 STRBPQ96SI9 672 aaKnown RBP17.45■□□□□ 0.38
SCFD2-201ENST00000388940 DNAJC25Q9H1X3 360 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 POLR3EQ9NVU0 708 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 PHLPP1O60346 1717 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 ME1P48163 572 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 STX1AQ16623 288 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 SUSD4Q5VX71 490 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 LINC00301Q8NCQ3 95 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 TMEM87BQ96K49 555 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 KCNF1Q9H3M0 494 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 PCDHA7Q9UN72 937 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 THRAP3Q9Y2W1 955 aaKnown RBP17.45■□□□□ 0.38
SCFD2-201ENST00000388940 LAMB2P55268 1798 aa17.45■□□□□ 0.38
SCFD2-201ENST00000388940 RTL9Q8NET4 1388 aa17.44■□□□□ 0.38
SCFD2-201ENST00000388940 CHD4Q14839 1912 aa17.44■□□□□ 0.38
SCFD2-201ENST00000388940 SH2B2O14492 632 aaPredicted RBP17.44■□□□□ 0.38
SCFD2-201ENST00000388940 KINO60870 393 aaKnown RBP17.44■□□□□ 0.38
SCFD2-201ENST00000388940 ZNF75DP51815 510 aa17.44■□□□□ 0.38
SCFD2-201ENST00000388940 IQCB1Q15051 598 aa17.44■□□□□ 0.38
SCFD2-201ENST00000388940 PARP10Q53GL7 1025 aa17.44■□□□□ 0.38
SCFD2-201ENST00000388940 TBC1D10CQ8IV04 446 aa17.44■□□□□ 0.38
SCFD2-201ENST00000388940 SPATA5Q8NB90 893 aa17.44■□□□□ 0.38
SCFD2-201ENST00000388940 FSIP1Q8NA03 581 aa17.44■□□□□ 0.38
SCFD2-201ENST00000388940 KCNG4Q8TDN1 519 aa17.44■□□□□ 0.38
SCFD2-201ENST00000388940 MRPS27Q92552 414 aaKnown RBP17.44■□□□□ 0.38
SCFD2-201ENST00000388940 UTP14AQ9BVJ6 771 aaKnown RBP17.44■□□□□ 0.38
SCFD2-201ENST00000388940 WWC3Q9ULE0 1092 aa17.44■□□□□ 0.38
SCFD2-201ENST00000388940 PATL2C9JE40 543 aaKnown RBP17.43■□□□□ 0.38
SCFD2-201ENST00000388940 PPFIA3O75145 1194 aa17.43■□□□□ 0.38
SCFD2-201ENST00000388940 CYB5R4Q7L1T6 521 aa17.43■□□□□ 0.38
SCFD2-201ENST00000388940 FMR1NBQ8N0W7 255 aaPredicted RBP17.43■□□□□ 0.38
SCFD2-201ENST00000388940 UQCRHLA0A096LP55 91 aa17.43■□□□□ 0.38
SCFD2-201ENST00000388940 CDKL5O76039 1030 aa17.43■□□□□ 0.38
SCFD2-201ENST00000388940 UQCRHP07919 91 aa17.43■□□□□ 0.38
SCFD2-201ENST00000388940 CDC25BP30305 580 aa17.43■□□□□ 0.38
SCFD2-201ENST00000388940 MYSM1Q5VVJ2 828 aa17.43■□□□□ 0.38
SCFD2-201ENST00000388940 SARM1Q6SZW1 724 aa17.43■□□□□ 0.38
SCFD2-201ENST00000388940 SPC24Q8NBT2 197 aa17.43■□□□□ 0.38
SCFD2-201ENST00000388940 AIDAQ96BJ3 306 aa17.43■□□□□ 0.38
SCFD2-201ENST00000388940 NRAPQ86VF7 1730 aa17.42■□□□□ 0.38
SCFD2-201ENST00000388940 APPP05067 770 aa17.42■□□□□ 0.38
SCFD2-201ENST00000388940 MAP3K12Q12852 859 aa17.42■□□□□ 0.38
SCFD2-201ENST00000388940 OTUD7BQ6GQQ9 843 aa17.42■□□□□ 0.38
SCFD2-201ENST00000388940 HELBQ8NG08 1087 aaPredicted RBP17.42■□□□□ 0.38
SCFD2-201ENST00000388940 PRIMPOLQ96LW4 560 aa17.42■□□□□ 0.38
SCFD2-201ENST00000388940 TRIM5Q9C035 493 aa17.42■□□□□ 0.38
SCFD2-201ENST00000388940 TIAM2Q8IVF5 1701 aa17.42■□□□□ 0.38
SCFD2-201ENST00000388940 DYNC1I1O14576 645 aa17.41■□□□□ 0.38
SCFD2-201ENST00000388940 CAMTA2O94983 1202 aa17.41■□□□□ 0.38
SCFD2-201ENST00000388940 CRKLP46109 303 aaKnown RBP17.41■□□□□ 0.38
SCFD2-201ENST00000388940 KIF23Q02241 960 aaPredicted RBP17.41■□□□□ 0.38
SCFD2-201ENST00000388940 SGMS1Q86VZ5 419 aa17.41■□□□□ 0.38
SCFD2-201ENST00000388940 IGDCC4Q8TDY8 1250 aa17.41■□□□□ 0.38
SCFD2-201ENST00000388940 MPHOSPH8Q99549 860 aa17.41■□□□□ 0.38
SCFD2-201ENST00000388940 ANO10Q9NW15 660 aa17.41■□□□□ 0.38
SCFD2-201ENST00000388940 SPATA31A1Q5TZJ5 1347 aa17.41■□□□□ 0.38
SCFD2-201ENST00000388940 METAP2P50579 478 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCFD2-201ENST00000388940 RASGRF1Q13972 1273 aa17.41■□□□□ 0.38
SCFD2-201ENST00000388940 STK38Q15208 465 aa17.41■□□□□ 0.38
SCFD2-201ENST00000388940 APOA5Q6Q788 366 aa17.41■□□□□ 0.38
SCFD2-201ENST00000388940 CLIC4Q9Y696 253 aa17.41■□□□□ 0.38
SCFD2-201ENST00000388940 SPTLC2O15270 562 aa17.4■□□□□ 0.38
SCFD2-201ENST00000388940 CCDC152Q4G0S7 254 aa17.4■□□□□ 0.38
SCFD2-201ENST00000388940 CPLX2Q6PUV4 134 aaKnown RBP17.4■□□□□ 0.38
SCFD2-201ENST00000388940 C11orf57Q6ZUT1 292 aaPredicted RBP17.4■□□□□ 0.38
SCFD2-201ENST00000388940 IFNL3Q8IZI9 196 aa17.4■□□□□ 0.38
SCFD2-201ENST00000388940 DENND2AQ9ULE3 1009 aa17.4■□□□□ 0.38
SCFD2-201ENST00000388940 PYCARDQ9ULZ3 195 aa17.4■□□□□ 0.38
SCFD2-201ENST00000388940 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
SCFD2-201ENST00000388940 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
SCFD2-201ENST00000388940 GOLGA6L19H0YKK7 550 aa17.4■□□□□ 0.38
SCFD2-201ENST00000388940 ATP6V1AP38606 617 aa17.4■□□□□ 0.38
SCFD2-201ENST00000388940 LIFRP42702 1097 aa17.4■□□□□ 0.38
SCFD2-201ENST00000388940 DDB1Q16531 1140 aa17.4■□□□□ 0.38
SCFD2-201ENST00000388940 DNTTIP2Q5QJE6 756 aaKnown RBP17.4■□□□□ 0.38
SCFD2-201ENST00000388940 SYNE3Q6ZMZ3 975 aa17.4■□□□□ 0.38
SCFD2-201ENST00000388940 NKX2-3Q8TAU0 364 aa17.4■□□□□ 0.38
SCFD2-201ENST00000388940 ECM29Q5VYK3 1845 aa17.39■□□□□ 0.38
SCFD2-201ENST00000388940 B4E1Z4 1266 aa17.39■□□□□ 0.37
SCFD2-201ENST00000388940 POLR3DP05423 398 aaPredicted RBP17.39■□□□□ 0.37
SCFD2-201ENST00000388940 GNAT2P19087 354 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms