RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 KLHL10Q6JEL2 608 aa14.5□□□□□ -0.09
CDX2-201ENST00000381020 TTC14Q96N46 770 aa14.5□□□□□ -0.09
CDX2-201ENST00000381020 CNNM2Q9H8M5 875 aa14.5□□□□□ -0.09
CDX2-201ENST00000381020 MCM9Q9NXL9 1143 aa14.5□□□□□ -0.09
CDX2-201ENST00000381020 NYXQ9GZU5 481 aa14.5□□□□□ -0.09
CDX2-201ENST00000381020 ANKRD26Q9UPS8 1709 aa14.49□□□□□ -0.09
CDX2-201ENST00000381020 SPTLC2O15270 562 aa14.49□□□□□ -0.09
CDX2-201ENST00000381020 CNNM3Q8NE01 707 aa14.49□□□□□ -0.09
CDX2-201ENST00000381020 NOL7Q9UMY1 257 aaKnown RBP14.49□□□□□ -0.09
CDX2-201ENST00000381020 MCAMP43121 646 aa14.49□□□□□ -0.09
CDX2-201ENST00000381020 CCAR2Q8N163 923 aaKnown RBP14.49□□□□□ -0.09
CDX2-201ENST00000381020 FAM200AQ8TCP9 573 aa14.49□□□□□ -0.09
CDX2-201ENST00000381020 MRPS27Q92552 414 aaKnown RBP14.49□□□□□ -0.09
CDX2-201ENST00000381020 RFX5P48382 616 aaPredicted RBP14.49□□□□□ -0.09
CDX2-201ENST00000381020 NLRP5P59047 1200 aa14.49□□□□□ -0.09
CDX2-201ENST00000381020 RPS8P62241 208 aaKnown RBP14.49□□□□□ -0.09
CDX2-201ENST00000381020 AATFQ9NY61 560 aaKnown RBP eCLIP14.49□□□□□ -0.09
CDX2-201ENST00000381020 FTOQ9C0B1 505 aaKnown RBP eCLIP14.48□□□□□ -0.09
CDX2-201ENST00000381020 PDIA3P30101 505 aaKnown RBP14.48□□□□□ -0.09
CDX2-201ENST00000381020 HIBADHP31937 336 aaKnown RBP14.48□□□□□ -0.09
CDX2-201ENST00000381020 SRP68Q9UHB9 627 aaKnown RBP14.48□□□□□ -0.09
CDX2-201ENST00000381020 PDE4BQ07343 736 aa14.48□□□□□ -0.09
CDX2-201ENST00000381020 PCMTD1Q96MG8 357 aaPredicted RBP14.48□□□□□ -0.09
CDX2-201ENST00000381020 CLIP2Q9UDT6 1046 aa14.48□□□□□ -0.09
CDX2-201ENST00000381020 MPHOSPH10O00566 681 aaKnown RBP14.47□□□□□ -0.09
CDX2-201ENST00000381020 CNBD1Q8NA66 436 aa14.47□□□□□ -0.09
CDX2-201ENST00000381020 PIH1D3Q9NQM4 214 aaKnown RBP14.47□□□□□ -0.09
CDX2-201ENST00000381020 RIMBP2O15034 1052 aa14.47□□□□□ -0.09
CDX2-201ENST00000381020 PRKAB2O43741 272 aa14.47□□□□□ -0.09
CDX2-201ENST00000381020 SYKP43405 635 aa14.47□□□□□ -0.09
CDX2-201ENST00000381020 TOB2Q14106 344 aaPredicted RBP14.47□□□□□ -0.09
CDX2-201ENST00000381020 CFAP100Q494V2 611 aa14.47□□□□□ -0.09
CDX2-201ENST00000381020 ERFEQ4G0M1 354 aa14.47□□□□□ -0.09
CDX2-201ENST00000381020 USP28Q96RU2 1077 aa14.47□□□□□ -0.09
CDX2-201ENST00000381020 FBXO3Q9UK99 471 aa14.47□□□□□ -0.09
CDX2-201ENST00000381020 CTAGE5O15320 804 aa14.47□□□□□ -0.09
CDX2-201ENST00000381020 IFNL3Q8IZI9 196 aa14.47□□□□□ -0.09
CDX2-201ENST00000381020 ZNF622Q969S3 477 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDX2-201ENST00000381020 LLPHQ9BRT6 129 aaKnown RBP14.47□□□□□ -0.09
CDX2-201ENST00000381020 GNAT2P19087 354 aa14.46□□□□□ -0.09
CDX2-201ENST00000381020 DHX8Q14562 1220 aaKnown RBP14.46□□□□□ -0.09
CDX2-201ENST00000381020 KCNG4Q8TDN1 519 aa14.46□□□□□ -0.09
CDX2-201ENST00000381020 INCENPQ9NQS7 918 aa14.46□□□□□ -0.09
CDX2-201ENST00000381020 PFKFB2O60825 505 aa14.46□□□□□ -0.09
CDX2-201ENST00000381020 BAG3O95817 575 aa14.46□□□□□ -0.09
CDX2-201ENST00000381020 CLCN1P35523 988 aa14.46□□□□□ -0.09
CDX2-201ENST00000381020 MON2Q7Z3U7 1717 aa14.46□□□□□ -0.09
CDX2-201ENST00000381020 STX1AQ16623 288 aa14.46□□□□□ -0.09
CDX2-201ENST00000381020 SOGA3Q5TF21 947 aa14.46□□□□□ -0.09
CDX2-201ENST00000381020 GJB4Q9NTQ9 266 aa14.46□□□□□ -0.09
CDX2-201ENST00000381020 RGPD8O14715 1765 aaPredicted RBP14.46□□□□□ -0.09
CDX2-201ENST00000381020 PXDNLA1KZ92 1463 aa14.46□□□□□ -0.1
CDX2-201ENST00000381020 TXLNAP40222 546 aa14.46□□□□□ -0.1
CDX2-201ENST00000381020 RASGRF1Q13972 1273 aa14.46□□□□□ -0.1
CDX2-201ENST00000381020 UVSSAQ2YD98 709 aa14.46□□□□□ -0.1
CDX2-201ENST00000381020 FAM177A1Q8N128 213 aaPredicted RBP14.46□□□□□ -0.1
CDX2-201ENST00000381020 KAT14Q9H8E8 782 aa14.46□□□□□ -0.1
CDX2-201ENST00000381020 NR1I2O75469 434 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 SPECC1Q5M775 1068 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 TMTC2Q8N394 836 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 DENND2AQ9ULE3 1009 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 UTYO14607 1347 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 A0A0G2JLW4 131 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 ERVV-1B6SEH8 477 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 CYP2E1P05181 493 aaPredicted RBP14.45□□□□□ -0.1
CDX2-201ENST00000381020 TPM1P09493 284 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 ST5P78524 1137 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 PICALMQ13492 652 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 SPTY2D1Q68D10 685 aaPredicted RBP14.45□□□□□ -0.1
CDX2-201ENST00000381020 CCDC186Q7Z3E2 898 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 ANKRD20A12PQ8NF67 263 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 PALLDQ8WX93 1383 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 PATL2C9JE40 543 aaKnown RBP14.45□□□□□ -0.1
CDX2-201ENST00000381020 KCNJ14Q9UNX9 436 aa14.45□□□□□ -0.1
CDX2-201ENST00000381020 USP42Q9H9J4 1324 aaKnown RBP14.45□□□□□ -0.1
CDX2-201ENST00000381020 PEAK1Q9H792 1746 aa14.44□□□□□ -0.1
CDX2-201ENST00000381020 LDHCP07864 332 aa14.44□□□□□ -0.1
CDX2-201ENST00000381020 ADD2P35612 726 aa14.44□□□□□ -0.1
CDX2-201ENST00000381020 LDHBP07195 334 aaKnown RBP14.44□□□□□ -0.1
CDX2-201ENST00000381020 AKNAD1Q5T1N1 836 aa14.44□□□□□ -0.1
CDX2-201ENST00000381020 AOPEPQ8N6M6 819 aa14.44□□□□□ -0.1
CDX2-201ENST00000381020 NSUN7Q8NE18 718 aaKnown RBP14.44□□□□□ -0.1
CDX2-201ENST00000381020 TMEM87BQ96K49 555 aa14.44□□□□□ -0.1
CDX2-201ENST00000381020 UQCRHLA0A096LP55 91 aa14.44□□□□□ -0.1
CDX2-201ENST00000381020 USP17L12C9JPN9 530 aa14.44□□□□□ -0.1
CDX2-201ENST00000381020 USP17L21D6R901 530 aa14.44□□□□□ -0.1
CDX2-201ENST00000381020 UQCRHP07919 91 aa14.44□□□□□ -0.1
CDX2-201ENST00000381020 ZNF274Q96GC6 653 aaPredicted RBP14.44□□□□□ -0.1
CDX2-201ENST00000381020 TRMT1Q9NXH9 659 aaKnown RBP14.44□□□□□ -0.1
CDX2-201ENST00000381020 SAP30BPQ9UHR5 308 aaKnown RBP14.44□□□□□ -0.1
CDX2-201ENST00000381020 ZKSCAN5Q9Y2L8 839 aa14.44□□□□□ -0.1
CDX2-201ENST00000381020 A0A087WWV3 80 aa14.43□□□□□ -0.1
CDX2-201ENST00000381020 KDM4FA0A1W2PPD8 638 aa14.43□□□□□ -0.1
CDX2-201ENST00000381020 CLSTN1O94985 981 aa14.43□□□□□ -0.1
CDX2-201ENST00000381020 KRT40Q6A162 431 aa14.43□□□□□ -0.1
CDX2-201ENST00000381020 STOX1Q6ZVD7 989 aa14.43□□□□□ -0.1
CDX2-201ENST00000381020 CCDC47Q96A33 483 aaKnown RBP14.43□□□□□ -0.1
CDX2-201ENST00000381020 CEP131Q9UPN4 1083 aa14.43□□□□□ -0.1
CDX2-201ENST00000381020 TSPY3P0CV98 308 aa14.43□□□□□ -0.1
CDX2-201ENST00000381020 TSPY8P0CW00 308 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms