RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 TOPAZ1Q8N9V7 1692 aa14.4□□□□□ -0.1
PRPF40B-202ENST00000380281 H2AFXP16104 143 aaPredicted RBP14.4□□□□□ -0.1
PRPF40B-202ENST00000380281 ATF3P18847 181 aa14.4□□□□□ -0.1
PRPF40B-202ENST00000380281 CCDC158Q5M9N0 1113 aa14.4□□□□□ -0.1
PRPF40B-202ENST00000380281 XAGE2Q96GT9 111 aa14.4□□□□□ -0.1
PRPF40B-202ENST00000380281 IQSEC3Q9UPP2 1182 aaPredicted RBP14.4□□□□□ -0.1
PRPF40B-202ENST00000380281 EYA2O00167 538 aa14.39□□□□□ -0.11
PRPF40B-202ENST00000380281 SPTLC2O15270 562 aa14.39□□□□□ -0.11
PRPF40B-202ENST00000380281 PLBD2Q8NHP8 589 aa14.39□□□□□ -0.11
PRPF40B-202ENST00000380281 TUBGCP6Q96RT7 1819 aa14.39□□□□□ -0.11
PRPF40B-202ENST00000380281 SERPINC1P01008 464 aa14.39□□□□□ -0.11
PRPF40B-202ENST00000380281 IMMTQ16891 758 aaKnown RBP14.39□□□□□ -0.11
PRPF40B-202ENST00000380281 CCAR2Q8N163 923 aaKnown RBP14.39□□□□□ -0.11
PRPF40B-202ENST00000380281 GPATCH11Q8N954 259 aa14.39□□□□□ -0.11
PRPF40B-202ENST00000380281 EPC1Q9H2F5 836 aa14.39□□□□□ -0.11
PRPF40B-202ENST00000380281 CARMIL3Q8ND23 1372 aa14.39□□□□□ -0.11
PRPF40B-202ENST00000380281 UTYO14607 1347 aa14.39□□□□□ -0.11
PRPF40B-202ENST00000380281 ZMYM1Q5SVZ6 1142 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 SMARCC2Q8TAQ2 1214 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 CCDC34Q96HJ3 373 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 CACNA1FO60840 1977 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 B4E1Z4 1266 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 ZNF213O14771 459 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 ZNF202O95125 648 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 MYCNP04198 464 aaPredicted RBP14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 CASQ1P31415 396 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 ZNF827Q17R98 1081 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 CFAP100Q494V2 611 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 TXLNBQ8N3L3 684 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 PNOCQ13519 176 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 METTL24Q5JXM2 366 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 EP400NLQ6ZTU2 488 aa14.38□□□□□ -0.11
PRPF40B-202ENST00000380281 hCG_1642624A0A1W2PR95 340 aa14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 FAM193AP78312 1265 aa14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 EXOSC10Q01780 885 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 SLC9C2Q5TAH2 1124 aa14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 KLHL34Q8N239 644 aa14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 DCAF5Q96JK2 942 aa14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 PRDM11Q9NQV5 511 aa14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 CNNM1Q9NRU3 951 aa14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 GEMIN8Q9NWZ8 242 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 KDM6AO15550 1401 aaPredicted RBP14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 ANKARQ7Z5J8 1434 aa14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 HMGB1P09429 215 aaKnown RBP14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 SFPQP23246 707 aaKnown RBP eCLIP14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 IL15P40933 162 aaPredicted RBP14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 TSGA10IPQ3SY00 556 aa14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 ZSWIM4Q9H7M6 989 aa14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 LTN1O94822 1766 aa14.37□□□□□ -0.11
PRPF40B-202ENST00000380281 FOXN1O15353 648 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 GPAA1O43292 621 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 TRDNQ13061 729 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 LDHAL6AQ6ZMR3 332 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 DRC1Q96MC2 740 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 NAT10Q9H0A0 1025 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 DNAI1Q9UI46 699 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 COBLO75128 1261 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 CCZ1BP86790 482 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 CCZ1P86791 482 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 MYSM1Q5VVJ2 828 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 ICE2Q659A1 982 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 NAA16Q6N069 864 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 TMCO3Q6UWJ1 677 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 LINC00301Q8NCQ3 95 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 ENGASEQ8NFI3 743 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 DPF2Q92785 391 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 KIAA1468Q9P260 1216 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 WDHD1O75717 1129 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 PFKFB1P16118 471 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 OAS2P29728 719 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 SART3Q15020 963 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 ALG1Q9BT22 464 aa14.36□□□□□ -0.11
PRPF40B-202ENST00000380281 TPM4P67936 248 aa14.35□□□□□ -0.11
PRPF40B-202ENST00000380281 RBM43Q6ZSC3 357 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-202ENST00000380281 LRP10Q7Z4F1 713 aa14.35□□□□□ -0.11
PRPF40B-202ENST00000380281 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.35□□□□□ -0.11
PRPF40B-202ENST00000380281 FMR1NBQ8N0W7 255 aaPredicted RBP14.35□□□□□ -0.11
PRPF40B-202ENST00000380281 YY1AP1Q9H869 796 aa14.35□□□□□ -0.11
PRPF40B-202ENST00000380281 RABL6Q3YEC7 729 aaPredicted RBP14.35□□□□□ -0.11
PRPF40B-202ENST00000380281 MUM1L1Q5H9M0 696 aa14.35□□□□□ -0.11
PRPF40B-202ENST00000380281 TRMT44Q8IYL2 757 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-202ENST00000380281 GRAMD1CQ8IYS0 662 aa14.35□□□□□ -0.11
PRPF40B-202ENST00000380281 UTP14AQ9BVJ6 771 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-202ENST00000380281 HELLSQ9NRZ9 838 aa14.35□□□□□ -0.11
PRPF40B-202ENST00000380281 HEG1Q9ULI3 1381 aa14.35□□□□□ -0.11
PRPF40B-202ENST00000380281 URI1O94763 535 aaPredicted RBP14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 LMAN1P49257 510 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 NUP133Q8WUM0 1156 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 DSCC1Q9BVC3 393 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 KCNJ14Q9UNX9 436 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 TMEM232C9JQI7 657 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 ANKRD65E5RJM6 399 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 CTAGE5O15320 804 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 CTDSPL2Q05D32 466 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 ARMCX5Q6P1M9 558 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 NBPF11Q86T75 865 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 FBXO18Q8NFZ0 1043 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 CPLX3Q8WVH0 158 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 RRP15Q9Y3B9 282 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 H7C1W4 665 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms