RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 YEATS4O95619 227 aa13.95□□□□□ -0.18
HERC6-203ENST00000380265 TNNI3KQ59H18 835 aa13.95□□□□□ -0.18
HERC6-203ENST00000380265 ZNF569Q5MCW4 686 aa13.95□□□□□ -0.18
HERC6-203ENST00000380265 FPGT-TNNI3KV9GXZ4 949 aa13.95□□□□□ -0.18
HERC6-203ENST00000380265 PREX1Q8TCU6 1659 aa13.95□□□□□ -0.18
HERC6-203ENST00000380265 ATP2B1P20020 1258 aa13.95□□□□□ -0.18
HERC6-203ENST00000380265 MTF1Q14872 753 aa13.95□□□□□ -0.18
HERC6-203ENST00000380265 BRD3Q15059 726 aa13.95□□□□□ -0.18
HERC6-203ENST00000380265 CCDC175P0C221 793 aa13.95□□□□□ -0.18
HERC6-203ENST00000380265 ATP5JP18859 108 aa13.95□□□□□ -0.18
HERC6-203ENST00000380265 RALYLQ86SE5 291 aaKnown RBP13.95□□□□□ -0.18
HERC6-203ENST00000380265 CLIC6Q96NY7 704 aa13.95□□□□□ -0.18
HERC6-203ENST00000380265 COL15A1P39059 1388 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 JMYQ8N9B5 988 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 JRKLQ9Y4A0 524 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 ROBO2Q9HCK4 1378 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 CMA1P23946 247 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 PIP4K2AP48426 406 aaPredicted RBP13.94□□□□□ -0.18
HERC6-203ENST00000380265 AKAP17AQ02040 695 aaKnown RBP13.94□□□□□ -0.18
HERC6-203ENST00000380265 ZNF827Q17R98 1081 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 KLHL10Q6JEL2 608 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 PPFIBP1Q86W92 1011 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 KAZALD1Q96I82 304 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 ABCB6Q9NP58 842 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 FDPSP14324 419 aaKnown RBP13.94□□□□□ -0.18
HERC6-203ENST00000380265 CCDC102BQ68D86 513 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 FCHSD1Q86WN1 690 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 ACBD3Q9H3P7 528 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 NFE2L3Q9Y4A8 694 aa13.94□□□□□ -0.18
HERC6-203ENST00000380265 EIF3CLB5ME19 914 aaKnown RBP13.93□□□□□ -0.18
HERC6-203ENST00000380265 RXRAP19793 462 aa13.93□□□□□ -0.18
HERC6-203ENST00000380265 E2F4Q16254 413 aa13.93□□□□□ -0.18
HERC6-203ENST00000380265 EPHA10Q5JZY3 1008 aa13.93□□□□□ -0.18
HERC6-203ENST00000380265 EIF3CQ99613 913 aaKnown RBP13.93□□□□□ -0.18
HERC6-203ENST00000380265 POLR3EQ9NVU0 708 aa13.93□□□□□ -0.18
HERC6-203ENST00000380265 ZNF609O15014 1411 aa13.93□□□□□ -0.18
HERC6-203ENST00000380265 SART3Q15020 963 aaKnown RBP13.93□□□□□ -0.18
HERC6-203ENST00000380265 RSRC2Q7L4I2 434 aaKnown RBP13.93□□□□□ -0.18
HERC6-203ENST00000380265 UBE3BQ7Z3V4 1068 aa13.93□□□□□ -0.18
HERC6-203ENST00000380265 SRGAP1Q7Z6B7 1085 aa13.93□□□□□ -0.18
HERC6-203ENST00000380265 SNRKQ9NRH2 765 aa13.93□□□□□ -0.18
HERC6-203ENST00000380265 PCDHA5Q9Y5H7 936 aa13.93□□□□□ -0.18
HERC6-203ENST00000380265 SOWAHDA6NJG2 315 aa13.93□□□□□ -0.18
HERC6-203ENST00000380265 HOXB7P09629 217 aa13.93□□□□□ -0.18
HERC6-203ENST00000380265 NOP2P46087 812 aaKnown RBP13.93□□□□□ -0.18
HERC6-203ENST00000380265 SPECC1LQ69YQ0 1117 aa13.93□□□□□ -0.18
HERC6-203ENST00000380265 MICALL1Q8N3F8 863 aa13.93□□□□□ -0.18
HERC6-203ENST00000380265 NRKQ7Z2Y5 1582 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 STX10O60499 249 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 FKBP4Q02790 459 aaKnown RBP eCLIP13.92□□□□□ -0.18
HERC6-203ENST00000380265 BRAPQ7Z569 592 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 CEP112Q8N8E3 955 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 AIFM3Q96NN9 605 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 XRN1Q8IZH2 1706 aaKnown RBP13.92□□□□□ -0.18
HERC6-203ENST00000380265 MROH7-TTC4A0A0A0MT08 1334 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 KIF28PB7ZC32 967 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 TFRCP02786 760 aaKnown RBP13.92□□□□□ -0.18
HERC6-203ENST00000380265 HSP90AB3PQ58FF7 597 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 LMOD2Q6P5Q4 547 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 GDAP1L1Q96MZ0 367 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 UBXN6Q9BZV1 441 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 RABEP2Q9H5N1 569 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 MRPL44Q9H9J2 332 aaKnown RBP13.92□□□□□ -0.18
HERC6-203ENST00000380265 HOOK1Q9UJC3 728 aaKnown RBP13.92□□□□□ -0.18
HERC6-203ENST00000380265 KBTBD3Q8NAB2 608 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 RGS22Q8NE09 1264 aa13.92□□□□□ -0.18
HERC6-203ENST00000380265 LRRC59Q96AG4 307 aaKnown RBP13.92□□□□□ -0.18
HERC6-203ENST00000380265 ZNF274Q96GC6 653 aaPredicted RBP13.92□□□□□ -0.18
HERC6-203ENST00000380265 USP31Q70CQ4 1352 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 LOC102724159A0A0B4J2E5 919 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 ATP5J2-PTCD1G3V325 749 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 PRC1O43663 620 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 PTCD1O75127 700 aaKnown RBP13.91□□□□□ -0.18
HERC6-203ENST00000380265 TRIM29Q14134 588 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 PWP2Q15269 919 aaKnown RBP13.91□□□□□ -0.18
HERC6-203ENST00000380265 A2ML1A8K2U0 1454 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 CTAGE15A4D2H0 777 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 CUTAO60888 179 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 CTAGE8P0CG41 777 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 MAGEA9P43362 315 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 TIMM10P62072 90 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 CTAGE6Q86UF2 777 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 CTAGE4Q8IX94 777 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 PNKPQ96T60 521 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 ALG1Q9BT22 464 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 PAG1Q9NWQ8 432 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 PSD3Q9NYI0 1048 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 HSPD1P10809 573 aaKnown RBP13.91□□□□□ -0.18
HERC6-203ENST00000380265 PACS2Q86VP3 889 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 FAM204AQ9H8W3 233 aa13.91□□□□□ -0.18
HERC6-203ENST00000380265 CTAGE9A4FU28 777 aa13.9□□□□□ -0.18
HERC6-203ENST00000380265 FOXN1O15353 648 aa13.9□□□□□ -0.18
HERC6-203ENST00000380265 STX17P56962 302 aa13.9□□□□□ -0.18
HERC6-203ENST00000380265 PLEKHO1Q53GL0 409 aaPredicted RBP13.9□□□□□ -0.18
HERC6-203ENST00000380265 NBPF6Q5VWK0 638 aa13.9□□□□□ -0.18
HERC6-203ENST00000380265 NBPF4Q96M43 638 aa13.9□□□□□ -0.18
HERC6-203ENST00000380265 EXOSC10Q01780 885 aaKnown RBP13.9□□□□□ -0.18
HERC6-203ENST00000380265 CASP8Q14790 479 aa13.9□□□□□ -0.18
HERC6-203ENST00000380265 LONRF3Q496Y0 759 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms