RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 MAATS1Q7Z4T9 603 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 CSADQ9Y600 493 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 NSMFQ6X4W1 530 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 USP48Q86UV5 1035 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 FNBP1Q96RU3 617 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 ZMYND15Q9H091 742 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 ABCC10Q5T3U5 1492 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 TMEM110-MUSTN1A8MSY1 372 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 EYA2O00167 538 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 SPOUT1Q5T280 376 aaKnown RBP12.36□□□□□ -0.43
LINC00654-201ENST00000379053 PDCL2Q8N4E4 241 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 IQCGQ9H095 443 aaKnown RBP12.36□□□□□ -0.43
LINC00654-201ENST00000379053 GOLGA6L9A6NEM1 432 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 PLIN2Q99541 437 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 LETM2Q2VYF4 491 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 CCDC50Q8IVM0 306 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 TBC1D2Q9BYX2 928 aa12.36□□□□□ -0.43
LINC00654-201ENST00000379053 CCDC169A6NNP5 214 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 M0QZ92 97 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 CCDC175P0C221 793 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 UBASH3AP57075 661 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 APOBRQ0VD83 1088 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 GSTA5Q7RTV2 222 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 AZI2Q9H6S1 392 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 PPM1EQ8WY54 764 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 TRAPPC8Q9Y2L5 1435 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 A0A1B0GUL7 405 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 A1BGP04217 495 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 SMTNP53814 917 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 PABPC4Q13310 644 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC00654-201ENST00000379053 ZSCAN30Q86W11 494 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 DNAJC10Q8IXB1 793 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.35□□□□□ -0.43
LINC00654-201ENST00000379053 CCDC171Q6TFL3 1326 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
LINC00654-201ENST00000379053 CAVIN2O95810 425 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 HDAC1Q13547 482 aaPredicted RBP12.35□□□□□ -0.43
LINC00654-201ENST00000379053 RAB3IL1Q8TBN0 382 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 PRDM10Q9NQV6 1147 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 SYCP2Q9BX26 1530 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 FNBP4Q8N3X1 1017 aaPredicted RBP12.35□□□□□ -0.43
LINC00654-201ENST00000379053 IFT74Q96LB3 600 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 SPON1Q9HCB6 807 aa12.35□□□□□ -0.43
LINC00654-201ENST00000379053 TAF5LO75529 589 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 SLC1A4P43007 532 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 SULF1Q8IWU6 871 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 RNF34Q969K3 372 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 BICDL2A1A5D9 508 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 TIMM10P62072 90 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 A0A1W2PRG0 241 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 SPTLC2O15270 562 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 CERS3Q8IU89 383 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 METTL22Q9BUU2 404 aaPredicted RBP12.34□□□□□ -0.43
LINC00654-201ENST00000379053 AATFQ9NY61 560 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC00654-201ENST00000379053 DKC1O60832 514 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC00654-201ENST00000379053 PTGS1P23219 599 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 RPL13P26373 211 aaKnown RBP12.34□□□□□ -0.43
LINC00654-201ENST00000379053 WDR44Q5JSH3 913 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 CEP63Q96MT8 703 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 SELENOOQ9BVL4 669 aa12.34□□□□□ -0.43
LINC00654-201ENST00000379053 TNFAIP1Q13829 316 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 C16orf45Q96MC5 204 aaPredicted RBP12.33□□□□□ -0.44
LINC00654-201ENST00000379053 NBPF3Q9H094 633 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 IGHDP01880 384 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 GNG11P61952 73 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 TSPYL6Q8N831 410 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 ATP2A1O14983 1001 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 CCT6AP40227 531 aaKnown RBP12.33□□□□□ -0.44
LINC00654-201ENST00000379053 CKAP4Q07065 602 aaKnown RBP12.33□□□□□ -0.44
LINC00654-201ENST00000379053 STRN3Q13033 797 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 DHX32Q7L7V1 743 aaKnown RBP12.33□□□□□ -0.44
LINC00654-201ENST00000379053 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.44
LINC00654-201ENST00000379053 NACA2Q9H009 215 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 RASAL2Q9UJF2 1139 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 FRMD4BQ9Y2L6 1034 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 POTEB2H3BUK9 544 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 DCAF17Q5H9S7 520 aaPredicted RBP12.33□□□□□ -0.44
LINC00654-201ENST00000379053 CCDC65Q8IXS2 484 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 TMEM106CQ9BVX2 250 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 GTPBP4Q9BZE4 634 aaKnown RBP12.33□□□□□ -0.44
LINC00654-201ENST00000379053 SLC52A2Q9HAB3 445 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.33□□□□□ -0.44
LINC00654-201ENST00000379053 WDR62O43379 1518 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 RBM6P78332 1123 aaKnown RBP12.33□□□□□ -0.44
LINC00654-201ENST00000379053 CCDC155Q8N6L0 562 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 GOLGA1Q92805 767 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 PHACTR3Q96KR7 559 aa12.33□□□□□ -0.44
LINC00654-201ENST00000379053 BIRC2Q13490 618 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 NEK11Q8NG66 645 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 LMBR1Q8WVP7 490 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 PRDM1O75626 825 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 CBX1P83916 185 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 FAM47CQ5HY64 1035 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 CREB3L3Q68CJ9 461 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 XAGE2Q96GT9 111 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 PAGR1Q9BTK6 254 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 TRPC3Q13507 836 aa12.32□□□□□ -0.44
LINC00654-201ENST00000379053 SNW1Q13573 536 aaKnown RBP12.32□□□□□ -0.44
LINC00654-201ENST00000379053 GIMAP6Q6P9H5 292 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms