RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 CGNQ9P2M7 1197 aaKnown RBP15.36■□□□□ 0.05
ACTN1-202ENST00000376839 TAOK2Q9UL54 1235 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 TNS3Q68CZ2 1445 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 DHX16O60231 1041 aaKnown RBP15.36■□□□□ 0.05
ACTN1-202ENST00000376839 WDHD1O75717 1129 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-202ENST00000376839 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-202ENST00000376839 PFKFB1P16118 471 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 NCAPHQ15003 741 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 ZRSR1Q15695 479 aaKnown RBP15.36■□□□□ 0.05
ACTN1-202ENST00000376839 ANO1Q5XXA6 986 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 ISM2Q6H9L7 571 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 TMC6Q7Z403 805 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 RALYLQ86SE5 291 aaKnown RBP15.36■□□□□ 0.05
ACTN1-202ENST00000376839 ISCA1Q9BUE6 129 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 NBPF3Q9H094 633 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 UBR2Q8IWV8 1755 aa15.36■□□□□ 0.05
ACTN1-202ENST00000376839 MARCKSP29966 332 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-202ENST00000376839 E4F1Q66K89 784 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-202ENST00000376839 ZCRB1Q8TBF4 217 aaKnown RBP15.35■□□□□ 0.05
ACTN1-202ENST00000376839 FAM89AQ96GI7 184 aa15.35■□□□□ 0.05
ACTN1-202ENST00000376839 BPIFA3Q9BQP9 254 aa15.35■□□□□ 0.05
ACTN1-202ENST00000376839 ZNF213O14771 459 aa15.35■□□□□ 0.05
ACTN1-202ENST00000376839 LRRFIP1Q32MZ4 808 aaKnown RBP15.35■□□□□ 0.05
ACTN1-202ENST00000376839 SYNE3Q6ZMZ3 975 aa15.35■□□□□ 0.05
ACTN1-202ENST00000376839 OGFRQ9NZT2 677 aa15.35■□□□□ 0.05
ACTN1-202ENST00000376839 AKAP2Q9Y2D5 859 aa15.35■□□□□ 0.05
ACTN1-202ENST00000376839 PCDH11XQ9BZA7 1347 aa15.35■□□□□ 0.05
ACTN1-202ENST00000376839 PCDH11YQ9BZA8 1340 aa15.35■□□□□ 0.05
ACTN1-202ENST00000376839 IGSF3O75054 1194 aa15.35■□□□□ 0.05
ACTN1-202ENST00000376839 RXRAP19793 462 aa15.35■□□□□ 0.05
ACTN1-202ENST00000376839 NLRP12P59046 1061 aa15.35■□□□□ 0.05
ACTN1-202ENST00000376839 DDX60Q8IY21 1712 aaKnown RBP15.35■□□□□ 0.05
ACTN1-202ENST00000376839 SYTL4Q96C24 671 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-202ENST00000376839 KCND1Q9NSA2 647 aa15.35■□□□□ 0.05
ACTN1-202ENST00000376839 IMPACTQ9P2X3 320 aa15.35■□□□□ 0.05
ACTN1-202ENST00000376839 GTPBP4Q9BZE4 634 aaKnown RBP15.34■□□□□ 0.05
ACTN1-202ENST00000376839 TCIRG1Q13488 830 aa15.34■□□□□ 0.05
ACTN1-202ENST00000376839 TAF7LQ5H9L4 462 aa15.34■□□□□ 0.05
ACTN1-202ENST00000376839 SYNE4Q8N205 404 aa15.34■□□□□ 0.05
ACTN1-202ENST00000376839 KIF18AQ8NI77 898 aa15.34■□□□□ 0.05
ACTN1-202ENST00000376839 DDX41Q9UJV9 622 aaKnown RBP15.34■□□□□ 0.05
ACTN1-202ENST00000376839 CPDO75976 1380 aa15.33■□□□□ 0.05
ACTN1-202ENST00000376839 C4AP0C0L4 1744 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 C4BP0C0L5 1744 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 ERVV-2B6SEH9 535 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 CMA1P23946 247 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 LMOD1P29536 600 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-202ENST00000376839 MCAMP43121 646 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 KMT5BQ4FZB7 885 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 TBC1D10CQ8IV04 446 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 SENP2Q9HC62 589 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 RIC1Q4ADV7 1423 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 ATP1A3P13637 1013 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 ELF2Q15723 593 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 TOM1L2Q6ZVM7 507 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 CYB5R4Q7L1T6 521 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 PPP1R13BQ96KQ4 1090 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 SPATA31A3Q5VYP0 1347 aa15.33■□□□□ 0.04
ACTN1-202ENST00000376839 HSD3B7Q9H2F3 369 aa15.32■□□□□ 0.04
ACTN1-202ENST00000376839 SFPQP23246 707 aaKnown RBP eCLIP15.32■□□□□ 0.042e-7■■□□□ 12.9
ACTN1-202ENST00000376839 SLC39A14Q15043 492 aa15.32■□□□□ 0.04
ACTN1-202ENST00000376839 VPS37DQ86XT2 251 aa15.32■□□□□ 0.04
ACTN1-202ENST00000376839 CCDC150Q8NCX0 1101 aa15.32■□□□□ 0.04
ACTN1-202ENST00000376839 ALG1Q9BT22 464 aa15.32■□□□□ 0.04
ACTN1-202ENST00000376839 IFIT5Q13325 482 aaKnown RBP15.31■□□□□ 0.04
ACTN1-202ENST00000376839 PHKBQ93100 1093 aa15.31■□□□□ 0.04
ACTN1-202ENST00000376839 ERO1AQ96HE7 468 aa15.31■□□□□ 0.04
ACTN1-202ENST00000376839 ZMYM6O95789 1325 aa15.31■□□□□ 0.04
ACTN1-202ENST00000376839 CDC27P30260 824 aa15.31■□□□□ 0.04
ACTN1-202ENST00000376839 FANCCQ00597 558 aa15.31■□□□□ 0.04
ACTN1-202ENST00000376839 SHC4Q6S5L8 630 aa15.31■□□□□ 0.04
ACTN1-202ENST00000376839 FBXO3Q9UK99 471 aa15.31■□□□□ 0.04
ACTN1-202ENST00000376839 ANGEL1Q9UNK9 670 aaKnown RBP15.31■□□□□ 0.04
ACTN1-202ENST00000376839 MYH7P12883 1935 aa15.31■□□□□ 0.04
ACTN1-202ENST00000376839 PAPPAQ13219 1627 aa15.31■□□□□ 0.04
ACTN1-202ENST00000376839 WDR17Q8IZU2 1322 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 WDR19Q8NEZ3 1342 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 ADD2P35612 726 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 SYKP43405 635 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 METAP2P50579 478 aaKnown RBP eCLIP15.3■□□□□ 0.042e-6■■■□□ 17.8
ACTN1-202ENST00000376839 METTL24Q5JXM2 366 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 KRT40Q6A162 431 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 FBXO38Q6PIJ6 1188 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 ZNF397Q8NF99 534 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-202ENST00000376839 TNS2Q63HR2 1409 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 SH2B2O14492 632 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-202ENST00000376839 SLU7O95391 586 aaKnown RBP15.3■□□□□ 0.04
ACTN1-202ENST00000376839 PCCAP05165 728 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-202ENST00000376839 CSF1RP07333 972 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 SLC9C2Q5TAH2 1124 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 SYT10Q6XYQ8 523 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 LRRN4CLQ8ND94 238 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 DPF2Q92785 391 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 CLIC6Q96NY7 704 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 UBE2Q2LH0YL09 131 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 NPHP1O15259 732 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 TRDNQ13061 729 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 PNOCQ13519 176 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 PTPAQ15257 358 aa15.3■□□□□ 0.04
ACTN1-202ENST00000376839 MICU3Q86XE3 530 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms