RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 GOLGA8BA8MQT2 603 aa25.49■■□□□ 1.67
RNF39-202ENST00000376751 ADD1P35611 737 aaKnown RBP25.49■■□□□ 1.67
RNF39-202ENST00000376751 MAP3K12Q12852 859 aa25.49■■□□□ 1.67
RNF39-202ENST00000376751 CYB5R4Q7L1T6 521 aa25.49■■□□□ 1.67
RNF39-202ENST00000376751 CDC5LQ99459 802 aaKnown RBP25.49■■□□□ 1.67
RNF39-202ENST00000376751 WTIPA6NIX2 430 aaPredicted RBP25.49■■□□□ 1.67
RNF39-202ENST00000376751 SF3B3Q15393 1217 aaKnown RBP25.49■■□□□ 1.67
RNF39-202ENST00000376751 PGBD1Q96JS3 809 aa25.49■■□□□ 1.67
RNF39-202ENST00000376751 COL24A1Q17RW2 1714 aa25.49■■□□□ 1.67
RNF39-202ENST00000376751 ALX1Q15699 326 aa25.48■■□□□ 1.67
RNF39-202ENST00000376751 ARMT1Q9H993 441 aa25.48■■□□□ 1.67
RNF39-202ENST00000376751 NEDD4P46934 1319 aa25.48■■□□□ 1.67
RNF39-202ENST00000376751 GUCY1B3Q02153 619 aa25.47■■□□□ 1.67
RNF39-202ENST00000376751 FAM182BQ5T319 152 aa25.47■■□□□ 1.67
RNF39-202ENST00000376751 SRP68Q9UHB9 627 aaKnown RBP25.47■■□□□ 1.67
RNF39-202ENST00000376751 KIF3AQ9Y496 699 aa25.47■■□□□ 1.67
RNF39-202ENST00000376751 COL1A1P02452 1464 aaPredicted RBP25.47■■□□□ 1.67
RNF39-202ENST00000376751 CLCN1P35523 988 aa25.47■■□□□ 1.67
RNF39-202ENST00000376751 TIAM2Q8IVF5 1701 aa25.47■■□□□ 1.67
RNF39-202ENST00000376751 ZMYM6O95789 1325 aa25.46■■□□□ 1.67
RNF39-202ENST00000376751 ILDR1Q86SU0 546 aaPredicted RBP25.46■■□□□ 1.67
RNF39-202ENST00000376751 ANKRD18AQ8IVF6 992 aa25.46■■□□□ 1.67
RNF39-202ENST00000376751 IQSEC3Q9UPP2 1182 aaPredicted RBP25.46■■□□□ 1.67
RNF39-202ENST00000376751 TACC3Q9Y6A5 838 aa25.46■■□□□ 1.67
RNF39-202ENST00000376751 FTOQ9C0B1 505 aaKnown RBP eCLIP25.45■■□□□ 1.67
RNF39-202ENST00000376751 ZNF804BA4D1E1 1349 aa25.45■■□□□ 1.66
RNF39-202ENST00000376751 PATL2C9JE40 543 aaKnown RBP25.45■■□□□ 1.66
RNF39-202ENST00000376751 TRDNQ13061 729 aa25.45■■□□□ 1.66
RNF39-202ENST00000376751 AMIGO3Q86WK7 504 aa25.45■■□□□ 1.66
RNF39-202ENST00000376751 IFNL3Q8IZI9 196 aa25.45■■□□□ 1.66
RNF39-202ENST00000376751 INCENPQ9NQS7 918 aa25.45■■□□□ 1.66
RNF39-202ENST00000376751 USP21Q9UK80 565 aa25.45■■□□□ 1.66
RNF39-202ENST00000376751 B4E1Z4 1266 aa25.44■■□□□ 1.66
RNF39-202ENST00000376751 SH2B2O14492 632 aaPredicted RBP25.44■■□□□ 1.66
RNF39-202ENST00000376751 PRKAB2O43741 272 aa25.44■■□□□ 1.66
RNF39-202ENST00000376751 RC3H1Q5TC82 1133 aaKnown RBP25.44■■□□□ 1.66
RNF39-202ENST00000376751 LCORLQ8N3X6 602 aa25.44■■□□□ 1.66
RNF39-202ENST00000376751 SENP2Q9HC62 589 aa25.44■■□□□ 1.66
RNF39-202ENST00000376751 NARFQ9UHQ1 456 aa25.44■■□□□ 1.66
RNF39-202ENST00000376751 TAF1LQ8IZX4 1826 aa25.44■■□□□ 1.66
RNF39-202ENST00000376751 GSG1L2A8MUP6 293 aa25.44■■□□□ 1.66
RNF39-202ENST00000376751 RPS6KA4O75676 772 aa25.44■■□□□ 1.66
RNF39-202ENST00000376751 GYG1P46976 350 aa25.44■■□□□ 1.66
RNF39-202ENST00000376751 CHMP4CQ96CF2 233 aa25.44■■□□□ 1.66
RNF39-202ENST00000376751 DACT1Q9NYF0 836 aa25.44■■□□□ 1.66
RNF39-202ENST00000376751 RGL2O15211 777 aa25.43■■□□□ 1.66
RNF39-202ENST00000376751 SLC10A5Q5PT55 438 aa25.43■■□□□ 1.66
RNF39-202ENST00000376751 CELF1Q92879 486 aaKnown RBP25.43■■□□□ 1.66
RNF39-202ENST00000376751 NUP62CLQ9H1M0 184 aa25.43■■□□□ 1.66
RNF39-202ENST00000376751 BSDC1Q9NW68 430 aaPredicted RBP25.43■■□□□ 1.66
RNF39-202ENST00000376751 ANGEL1Q9UNK9 670 aaKnown RBP25.43■■□□□ 1.66
RNF39-202ENST00000376751 GOLGA6L4A6NEF3 574 aa25.42■■□□□ 1.66
RNF39-202ENST00000376751 CEBPZQ03701 1054 aaKnown RBP25.42■■□□□ 1.66
RNF39-202ENST00000376751 CTDSPL2Q05D32 466 aa25.42■■□□□ 1.66
RNF39-202ENST00000376751 OTUD7BQ6GQQ9 843 aa25.42■■□□□ 1.66
RNF39-202ENST00000376751 GNPATO15228 680 aa25.42■■□□□ 1.66
RNF39-202ENST00000376751 KLHL34Q8N239 644 aa25.42■■□□□ 1.66
RNF39-202ENST00000376751 NAPBQ9H115 298 aa25.42■■□□□ 1.66
RNF39-202ENST00000376751 CFAP45Q9UL16 551 aa25.42■■□□□ 1.66
RNF39-202ENST00000376751 MINPP1Q9UNW1 487 aa25.42■■□□□ 1.66
RNF39-202ENST00000376751 ECM29Q5VYK3 1845 aa25.41■■□□□ 1.66
RNF39-202ENST00000376751 CAMK4Q16566 473 aa25.41■■□□□ 1.66
RNF39-202ENST00000376751 UVSSAQ2YD98 709 aa25.41■■□□□ 1.66
RNF39-202ENST00000376751 USP28Q96RU2 1077 aa25.41■■□□□ 1.66
RNF39-202ENST00000376751 LY75O60449 1722 aa25.41■■□□□ 1.66
RNF39-202ENST00000376751 PNPLA7Q6ZV29 1317 aa25.41■■□□□ 1.66
RNF39-202ENST00000376751 CACNA1SQ13698 1873 aa25.4■■□□□ 1.66
RNF39-202ENST00000376751 ADGRA1Q86SQ6 560 aa25.4■■□□□ 1.66
RNF39-202ENST00000376751 ZSCAN30Q86W11 494 aa25.4■■□□□ 1.66
RNF39-202ENST00000376751 MIGA1Q8NAN2 632 aa25.4■■□□□ 1.66
RNF39-202ENST00000376751 LRP2BPQ9P2M1 347 aa25.4■■□□□ 1.66
RNF39-202ENST00000376751 ORC3Q9UBD5 711 aaPredicted RBP25.4■■□□□ 1.66
RNF39-202ENST00000376751 CCNL1Q9UK58 526 aaPredicted RBP25.4■■□□□ 1.66
RNF39-202ENST00000376751 DHX16O60231 1041 aaKnown RBP25.4■■□□□ 1.66
RNF39-202ENST00000376751 NR1I2O75469 434 aa25.4■■□□□ 1.66
RNF39-202ENST00000376751 UBE4AQ14139 1066 aa25.4■■□□□ 1.66
RNF39-202ENST00000376751 HS1BP3Q53T59 392 aa25.4■■□□□ 1.66
RNF39-202ENST00000376751 BICD2Q8TD16 824 aa25.4■■□□□ 1.66
RNF39-202ENST00000376751 RCOR1Q9UKL0 485 aa25.4■■□□□ 1.66
RNF39-202ENST00000376751 SBF2Q86WG5 1849 aa25.4■■□□□ 1.66
RNF39-202ENST00000376751 GTF2E1P29083 439 aaPredicted RBP25.39■■□□□ 1.66
RNF39-202ENST00000376751 MAP3K11Q16584 847 aa25.39■■□□□ 1.66
RNF39-202ENST00000376751 IGDCC4Q8TDY8 1250 aa25.39■■□□□ 1.66
RNF39-202ENST00000376751 CLSTN2Q9H4D0 955 aa25.39■■□□□ 1.66
RNF39-202ENST00000376751 CCDC24Q8N4L8 307 aa25.38■■□□□ 1.65
RNF39-202ENST00000376751 LY9Q9HBG7 655 aa25.38■■□□□ 1.65
RNF39-202ENST00000376751 GJB4Q9NTQ9 266 aa25.38■■□□□ 1.65
RNF39-202ENST00000376751 DDX19AQ9NUU7 478 aaKnown RBP25.38■■□□□ 1.65
RNF39-202ENST00000376751 SLC4A4Q9Y6R1 1079 aa25.38■■□□□ 1.65
RNF39-202ENST00000376751 CPLX1O14810 134 aa25.38■■□□□ 1.65
RNF39-202ENST00000376751 RXRAP19793 462 aa25.38■■□□□ 1.65
RNF39-202ENST00000376751 APOA5Q6Q788 366 aa25.38■■□□□ 1.65
RNF39-202ENST00000376751 C8orf76Q96K31 380 aa25.38■■□□□ 1.65
RNF39-202ENST00000376751 KLRK1P26718 216 aa25.37■■□□□ 1.65
RNF39-202ENST00000376751 NBPF5PQ86XG9 351 aaPredicted RBP25.37■■□□□ 1.65
RNF39-202ENST00000376751 SETDB2Q96T68 719 aa25.37■■□□□ 1.65
RNF39-202ENST00000376751 USP25Q9UHP3 1055 aa25.37■■□□□ 1.65
RNF39-202ENST00000376751 SPATA31A6Q5VVP1 1343 aa25.37■■□□□ 1.65
RNF39-202ENST00000376751 TNRC6CQ9HCJ0 1690 aaKnown RBP25.37■■□□□ 1.65
RNF39-202ENST00000376751 CYP7A1P22680 504 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms